Gene annotation
Transcriptome id Sobic.005G198800.1
Synonym Sb05g025590
Functional annotation OsFBX430 - F-box domain containing protein, expressed
UniProt C5Y709
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G04230 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os11g42240.1 : OsFBX431 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G244100 - -
2 Sobic.004G054900 expressed protein -
3 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
4 Sobic.009G110700 OsFBL58 - F-box domain and LRR containing protein, expressed -
5 Sobic.009G047100 GEX1, putative, expressed -
6 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.005G189100 transcription factor Dp, putative, expressed -
8 Sobic.002G006200 - -
9 Sobic.008G138400 expressed protein -
10 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
11 Sobic.009G234900 WRKY43, expressed -
12 Sobic.003G245300 3-5 exonuclease domain-containing protein, putative, expressed -
13 Sobic.001G143700 cupin domain containing protein, expressed -
14 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
15 Sobic.005G148000 - -
16 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
18 Sobic.001G167300 - -
19 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
20 Sobic.005G040100 expressed protein -


Gene co-expression network
sample Sobic005G198800 Sobic005G198800 Sobic009G244100 Sobic009G244100 Sobic005G198800--Sobic009G244100 Sobic004G054900 Sobic004G054900 Sobic005G198800--Sobic004G054900 Sobic008G024200 Sobic008G024200 Sobic005G198800--Sobic008G024200 Sobic009G110700 Sobic009G110700 Sobic005G198800--Sobic009G110700 Sobic009G047100 Sobic009G047100 Sobic005G198800--Sobic009G047100 Sobic010G121700 Sobic010G121700 Sobic005G198800--Sobic010G121700 Sobic005G189100 Sobic005G189100 Sobic005G198800--Sobic005G189100 Sobic002G006200 Sobic002G006200 Sobic005G198800--Sobic002G006200 Sobic008G138400 Sobic008G138400 Sobic005G198800--Sobic008G138400 Sobic009G244100--Sobic005G198800 Sobic009G244100--Sobic009G110700 Sobic009G244100--Sobic004G054900 Sobic002G049700 Sobic002G049700 Sobic009G244100--Sobic002G049700 Sobic001G392650 Sobic001G392650 Sobic009G244100--Sobic001G392650 Sobic001G053500 Sobic001G053500 Sobic009G244100--Sobic001G053500 Sobic001G063300 Sobic001G063300 Sobic009G244100--Sobic001G063300 Sobic002G021500 Sobic002G021500 Sobic009G244100--Sobic002G021500 Sobic004G308800 Sobic004G308800 Sobic009G244100--Sobic004G308800 Sobic009G250300 Sobic009G250300 Sobic004G054900--Sobic009G250300 Sobic002G015900 Sobic002G015900 Sobic004G054900--Sobic002G015900 Sobic001G337100 Sobic001G337100 Sobic004G054900--Sobic001G337100 Sobic004G054900--Sobic001G063300 Sobic005G006100 Sobic005G006100 Sobic004G054900--Sobic005G006100 Sobic001G167300 Sobic001G167300 Sobic004G054900--Sobic001G167300 Sobic007G122600 Sobic007G122600 Sobic004G054900--Sobic007G122600 Sobic007G134501 Sobic007G134501 Sobic004G054900--Sobic007G134501 Sobic005G040100 Sobic005G040100 Sobic004G054900--Sobic005G040100 Sobic008G024200--Sobic009G047100 Sobic009G234900 Sobic009G234900 Sobic008G024200--Sobic009G234900 Sobic008G024200--Sobic010G121700 Sobic008G024200--Sobic005G189100 Sobic008G024200--Sobic002G006200 Sobic001G089300 Sobic001G089300 Sobic008G024200--Sobic001G089300 Sobic001G143700 Sobic001G143700 Sobic008G024200--Sobic001G143700 Sobic008G024200--Sobic001G167300 Sobic008G024200--Sobic008G138400 Sobic003G245300 Sobic003G245300 Sobic009G110700--Sobic003G245300 Sobic009G110700--Sobic007G122600 Sobic009G110700--Sobic008G024200 Sobic009G110700--Sobic009G047100 Sobic009G110700--Sobic005G006100 Sobic009G110700--Sobic001G167300 Sobic010G216100 Sobic010G216100 Sobic009G110700--Sobic010G216100 Sobic010G207800 Sobic010G207800 Sobic009G110700--Sobic010G207800 Sobic001G192300 Sobic001G192300 Sobic009G110700--Sobic001G192300 Sobic009G047100--Sobic008G024200 Sobic009G047100--Sobic002G006200 Sobic009G047100--Sobic009G234900 Sobic009G047100--Sobic005G189100 Sobic009G047100--Sobic001G089300 Sobic009G047100--Sobic010G121700 Sobic009G047100--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic009G047100--Sobic002G097300 Sobic009G047100--Sobic001G143700 Sobic010G121700--Sobic009G234900 Sobic010G121700--Sobic005G189100 Sobic010G121700--Sobic008G024200 Sobic010G121700--Sobic001G089300 Sobic010G121700--Sobic009G047100 Sobic010G121700--Sobic002G006200 Sobic002G156400 Sobic002G156400 Sobic010G121700--Sobic002G156400 Sobic010G121700--Sobic008G138400 Sobic010G121700--Sobic002G097300 Sobic005G189100--Sobic002G006200 Sobic005G189100--Sobic001G089300 Sobic005G189100--Sobic009G234900 Sobic005G189100--Sobic008G138400 Sobic005G189100--Sobic001G143700 Sobic005G189100--Sobic002G097300 Sobic005G189100--Sobic010G121700 Sobic005G189100--Sobic008G024200 Sobic005G189100--Sobic002G156400 Sobic002G006200--Sobic005G189100 Sobic002G006200--Sobic001G143700 Sobic002G006200--Sobic002G097300 Sobic002G006200--Sobic008G138400 Sobic002G006200--Sobic001G089300 Sobic005G148000 Sobic005G148000 Sobic002G006200--Sobic005G148000 Sobic002G006200--Sobic009G234900 Sobic002G006200--Sobic008G024200 Sobic002G006200--Sobic009G047100 Sobic008G138400--Sobic002G097300 Sobic008G138400--Sobic002G156400 Sobic005G140900 Sobic005G140900 Sobic008G138400--Sobic005G140900 Sobic008G138400--Sobic005G189100 Sobic008G138400--Sobic002G006200 Sobic008G138400--Sobic001G089300 Sobic008G138400--Sobic001G143700 Sobic008G138400--Sobic009G234900 Sobic008G138400--Sobic005G148000
Octagon: transcription factors


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