Gene annotation
Transcriptome id Sobic.009G244100.6
Synonym
Functional annotation -
UniProt A0A1B6PA71
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G198800 OsFBX430 - F-box domain containing protein, expressed -
2 Sobic.009G110700 OsFBL58 - F-box domain and LRR containing protein, expressed -
3 Sobic.004G054900 expressed protein -
4 Sobic.002G049700 potassium channel AKT1, putative, expressed -
5 Sobic.001G392650 - -
6 Sobic.001G053500 expressed protein -
7 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
8 Sobic.002G021500 OsFBX209 - F-box domain containing protein, expressed -
9 Sobic.004G308800 expressed protein -
10 Sobic.009G060000 WD40-like domain containing protein, putative, expressed -
11 Sobic.003G245300 3-5 exonuclease domain-containing protein, putative, expressed -
12 Sobic.001G212500 vacuolar protein sorting-associated protein 52, putative, expressed -
13 Sobic.002G330200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
14 Sobic.006G205400 villin protein, putative, expressed -
15 Sobic.007G042800 expressed protein -
16 Sobic.009G250300 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.005G176700 methyltransferase, putative, expressed -
18 Sobic.005G191300 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.002G015900 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
20 Sobic.010G177200 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein


Gene co-expression network
sample Sobic009G244100 Sobic009G244100 Sobic005G198800 Sobic005G198800 Sobic009G244100--Sobic005G198800 Sobic009G110700 Sobic009G110700 Sobic009G244100--Sobic009G110700 Sobic004G054900 Sobic004G054900 Sobic009G244100--Sobic004G054900 Sobic002G049700 Sobic002G049700 Sobic009G244100--Sobic002G049700 Sobic001G392650 Sobic001G392650 Sobic009G244100--Sobic001G392650 Sobic001G053500 Sobic001G053500 Sobic009G244100--Sobic001G053500 Sobic001G063300 Sobic001G063300 Sobic009G244100--Sobic001G063300 Sobic002G021500 Sobic002G021500 Sobic009G244100--Sobic002G021500 Sobic004G308800 Sobic004G308800 Sobic009G244100--Sobic004G308800 Sobic005G198800--Sobic009G244100 Sobic005G198800--Sobic004G054900 Sobic008G024200 Sobic008G024200 Sobic005G198800--Sobic008G024200 Sobic005G198800--Sobic009G110700 Sobic009G047100 Sobic009G047100 Sobic005G198800--Sobic009G047100 Sobic010G121700 Sobic010G121700 Sobic005G198800--Sobic010G121700 Sobic005G189100 Sobic005G189100 Sobic005G198800--Sobic005G189100 Sobic002G006200 Sobic002G006200 Sobic005G198800--Sobic002G006200 Sobic008G138400 Sobic008G138400 Sobic005G198800--Sobic008G138400 Sobic003G245300 Sobic003G245300 Sobic009G110700--Sobic003G245300 Sobic007G122600 Sobic007G122600 Sobic009G110700--Sobic007G122600 Sobic009G110700--Sobic008G024200 Sobic009G110700--Sobic009G047100 Sobic005G006100 Sobic005G006100 Sobic009G110700--Sobic005G006100 Sobic001G167300 Sobic001G167300 Sobic009G110700--Sobic001G167300 Sobic010G216100 Sobic010G216100 Sobic009G110700--Sobic010G216100 Sobic010G207800 Sobic010G207800 Sobic009G110700--Sobic010G207800 Sobic001G192300 Sobic001G192300 Sobic009G110700--Sobic001G192300 Sobic009G250300 Sobic009G250300 Sobic004G054900--Sobic009G250300 Sobic002G015900 Sobic002G015900 Sobic004G054900--Sobic002G015900 Sobic001G337100 Sobic001G337100 Sobic004G054900--Sobic001G337100 Sobic004G054900--Sobic001G063300 Sobic004G054900--Sobic005G006100 Sobic004G054900--Sobic001G167300 Sobic004G054900--Sobic007G122600 Sobic007G134501 Sobic007G134501 Sobic004G054900--Sobic007G134501 Sobic005G040100 Sobic005G040100 Sobic004G054900--Sobic005G040100 Sobic002G049700--Sobic001G392650 Sobic008G134600 Sobic008G134600 Sobic002G049700--Sobic008G134600 Sobic009G060000 Sobic009G060000 Sobic002G049700--Sobic009G060000 Sobic009G158300 Sobic009G158300 Sobic002G049700--Sobic009G158300 Sobic001G092500 Sobic001G092500 Sobic002G049700--Sobic001G092500 Sobic001G188100 Sobic001G188100 Sobic002G049700--Sobic001G188100 Sobic004G134000 Sobic004G134000 Sobic002G049700--Sobic004G134000 Sobic008G043300 Sobic008G043300 Sobic002G049700--Sobic008G043300 Sobic010G276100 Sobic010G276100 Sobic002G049700--Sobic010G276100 Sobic001G392650--Sobic002G049700 Sobic001G392650--Sobic008G134600 Sobic002G330200 Sobic002G330200 Sobic001G392650--Sobic002G330200 Sobic001G392650--Sobic009G158300 Sobic003G343000 Sobic003G343000 Sobic001G392650--Sobic003G343000 Sobic008G124301 Sobic008G124301 Sobic001G392650--Sobic008G124301 Sobic001G109900 Sobic001G109900 Sobic001G392650--Sobic001G109900 Sobic001G392650--Sobic009G060000 Sobic007G139300 Sobic007G139300 Sobic001G392650--Sobic007G139300 Sobic001G053500--Sobic009G110700 Sobic001G053500--Sobic003G245300 Sobic001G053500--Sobic001G192300 Sobic001G053500--Sobic007G122600 Sobic001G053500--Sobic005G006100 Sobic001G053500--Sobic009G060000 Sobic001G053500--Sobic010G216100 Sobic001G053500--Sobic002G049700 Sobic001G053500--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic001G063300--Sobic001G261416 Sobic010G090200 Sobic010G090200 Sobic001G063300--Sobic010G090200 Sobic001G063300--Sobic010G207800 Sobic001G063300--Sobic010G216100 Sobic007G014000 Sobic007G014000 Sobic001G063300--Sobic007G014000 Sobic010G240300 Sobic010G240300 Sobic001G063300--Sobic010G240300 Sobic007G215200 Sobic007G215200 Sobic001G063300--Sobic007G215200 Sobic001G287400 Sobic001G287400 Sobic001G063300--Sobic001G287400 Sobic001G063300--Sobic005G006100 Sobic002G021500--Sobic002G330200 Sobic002G021500--Sobic001G392650 Sobic002G021500--Sobic002G049700 Sobic002G021500--Sobic009G158300 Sobic002G406801 Sobic002G406801 Sobic002G021500--Sobic002G406801 Sobic002G021500--Sobic008G134600 Sobic007G042800 Sobic007G042800 Sobic002G021500--Sobic007G042800 Sobic002G021500--Sobic007G139300 Sobic004G099200 Sobic004G099200 Sobic002G021500--Sobic004G099200 Sobic004G308800--Sobic009G110700 Sobic004G308800--Sobic003G245300 Sobic007G145500 Sobic007G145500 Sobic004G308800--Sobic007G145500 Sobic002G194300 Sobic002G194300 Sobic004G308800--Sobic002G194300 Sobic004G308800--Sobic010G216100 Sobic003G351100 Sobic003G351100 Sobic004G308800--Sobic003G351100 Sobic007G095333 Sobic007G095333 Sobic004G308800--Sobic007G095333 Sobic010G215000 Sobic010G215000 Sobic004G308800--Sobic010G215000 Sobic007G160501 Sobic007G160501 Sobic004G308800--Sobic007G160501
Octagon: transcription factors


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