Gene annotation
Transcriptome id Sobic.005G232100.1
Synonym Sb05g027930
Functional annotation prenyltransferase, putative, expressed
UniProt C5Y1U2
Pfam PF01239
Panther DB PTHR11129 PTHR11129:SF3
NCBI CDD -
KEGG Orthology K14137; protein prenyltransferase alpha subunit repeat containing protein 1
Gene Ontology GO:0018342; protein prenylation GO:0008318protein prenyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G10095 : Protein prenylyltransferase superfamily protein
RAP-DB (Rice) LOC_Os01g49060.1 : prenyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a018650
Brachypodium KQK23520 , KQK23521 , KQK23519 , KQK23523 , KQK23522 , KQK23524
Barley HORVU4Hr1G027070.12 , HORVU4Hr1G027070.13 , HORVU4Hr1G027070.10 , HORVU4Hr1G027070.11 , HORVU4Hr1G027070.16 , HORVU4Hr1G027070.14 , HORVU4Hr1G027070.15 , HORVU4Hr1G027070.18 , HORVU4Hr1G027070.19 , HORVU4Hr1G027070.8 , HORVU4Hr1G027070.1 , HORVU4Hr1G027070.3 , HORVU4Hr1G027070.4 , HORVU4Hr1G027070.5 , HORVU4Hr1G027070.6 , HORVU4Hr1G027070.7 , HORVU4Hr1G027070.23 , HORVU4Hr1G027070.22 , HORVU4Hr1G027070.20
Wheat TraesCS4D02G134000 , TraesCS4A02G179100 , TraesCS4B02G139300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G104500 disease resistance RPP13-like protein 1, putative, expressed -
2 Sobic.003G159400 - -
3 Sobic.009G149600 transmembrane protein 18, putative, expressed -
4 Sobic.009G181900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
5 Sobic.004G295900 cell division cycle protein 23, putative, expressed K03355: APC8, anaphase-promoting complex subunit 8
6 Sobic.008G067700 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.001G410300 - -
8 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
9 Sobic.001G033800 expressed protein -
10 Sobic.010G043700 transferase family protein, putative, expressed -
11 Sobic.009G036366 - -
12 Sobic.010G278400 coiled-coil domain-containing protein 12, putative, expressed K12871: coiled-coil domain-containing protein 12
13 Sobic.005G068400 - -
14 Sobic.002G288500 serine/threonine kinase, putative, expressed -
15 Sobic.002G399000 expressed protein -
16 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
17 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
19 Sobic.003G262500 OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed -
20 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase


Gene co-expression network
sample Sobic005G232100 Sobic005G232100 Sobic002G104500 Sobic002G104500 Sobic005G232100--Sobic002G104500 Sobic003G159400 Sobic003G159400 Sobic005G232100--Sobic003G159400 Sobic009G149600 Sobic009G149600 Sobic005G232100--Sobic009G149600 Sobic009G181900 Sobic009G181900 Sobic005G232100--Sobic009G181900 Sobic004G295900 Sobic004G295900 Sobic005G232100--Sobic004G295900 Sobic008G067700 Sobic008G067700 Sobic005G232100--Sobic008G067700 Sobic001G410300 Sobic001G410300 Sobic005G232100--Sobic001G410300 Sobic010G249600 Sobic010G249600 Sobic005G232100--Sobic010G249600 Sobic001G033800 Sobic001G033800 Sobic005G232100--Sobic001G033800 Sobic003G418800 Sobic003G418800 Sobic002G104500--Sobic003G418800 Sobic002G104500--Sobic003G159400 Sobic002G350800 Sobic002G350800 Sobic002G104500--Sobic002G350800 Sobic001G140101 Sobic001G140101 Sobic002G104500--Sobic001G140101 Sobic002G104500--Sobic005G232100 Sobic010G278400 Sobic010G278400 Sobic002G104500--Sobic010G278400 Sobic002G104500--Sobic009G149600 Sobic002G104500--Sobic001G033800 Sobic002G104500--Sobic004G295900 Sobic005G145700 Sobic005G145700 Sobic003G159400--Sobic005G145700 Sobic001G391800 Sobic001G391800 Sobic003G159400--Sobic001G391800 Sobic004G302500 Sobic004G302500 Sobic003G159400--Sobic004G302500 Sobic003G159400--Sobic002G104500 Sobic003G159400--Sobic009G149600 Sobic009G054200 Sobic009G054200 Sobic003G159400--Sobic009G054200 Sobic010G021401 Sobic010G021401 Sobic003G159400--Sobic010G021401 Sobic001G435800 Sobic001G435800 Sobic003G159400--Sobic001G435800 Sobic004G337700 Sobic004G337700 Sobic003G159400--Sobic004G337700 Sobic001G191300 Sobic001G191300 Sobic009G149600--Sobic001G191300 Sobic001G350300 Sobic001G350300 Sobic009G149600--Sobic001G350300 Sobic009G149600--Sobic010G249600 Sobic004G350600 Sobic004G350600 Sobic009G149600--Sobic004G350600 Sobic006G249600 Sobic006G249600 Sobic009G149600--Sobic006G249600 Sobic002G399000 Sobic002G399000 Sobic009G149600--Sobic002G399000 Sobic007G077466 Sobic007G077466 Sobic009G149600--Sobic007G077466 Sobic009G223900 Sobic009G223900 Sobic009G149600--Sobic009G223900 Sobic003G155800 Sobic003G155800 Sobic009G149600--Sobic003G155800 Sobic009G181900--Sobic002G399000 Sobic007G114650 Sobic007G114650 Sobic009G181900--Sobic007G114650 Sobic009G112500 Sobic009G112500 Sobic009G181900--Sobic009G112500 Sobic003G440500 Sobic003G440500 Sobic009G181900--Sobic003G440500 Sobic003G262500 Sobic003G262500 Sobic009G181900--Sobic003G262500 Sobic005G025400 Sobic005G025400 Sobic009G181900--Sobic005G025400 Sobic009G181900--Sobic001G410300 Sobic009G181900--Sobic010G278400 Sobic009G181900--Sobic001G350300 Sobic005G068400 Sobic005G068400 Sobic004G295900--Sobic005G068400 Sobic006G088450 Sobic006G088450 Sobic004G295900--Sobic006G088450 Sobic004G295900--Sobic010G249600 Sobic007G226000 Sobic007G226000 Sobic004G295900--Sobic007G226000 Sobic004G295900--Sobic009G149600 Sobic002G288500 Sobic002G288500 Sobic004G295900--Sobic002G288500 Sobic005G135300 Sobic005G135300 Sobic004G295900--Sobic005G135300 Sobic004G295900--Sobic001G033800 Sobic007G185000 Sobic007G185000 Sobic004G295900--Sobic007G185000 Sobic001G541232 Sobic001G541232 Sobic008G067700--Sobic001G541232 Sobic001G019601 Sobic001G019601 Sobic008G067700--Sobic001G019601 Sobic006G152100 Sobic006G152100 Sobic008G067700--Sobic006G152100 Sobic009G036366 Sobic009G036366 Sobic008G067700--Sobic009G036366 Sobic008G067700--Sobic010G249600 Sobic001G503700 Sobic001G503700 Sobic008G067700--Sobic001G503700 Sobic008G067700--Sobic002G288500 Sobic008G067700--Sobic009G149600 Sobic008G067700--Sobic001G350300 Sobic010G043700 Sobic010G043700 Sobic001G410300--Sobic010G043700 Sobic001G410300--Sobic009G181900 Sobic003G139100 Sobic003G139100 Sobic001G410300--Sobic003G139100 Sobic003G017300 Sobic003G017300 Sobic001G410300--Sobic003G017300 Sobic001G341900 Sobic001G341900 Sobic001G410300--Sobic001G341900 Sobic001G410300--Sobic009G149600 Sobic004G224100 Sobic004G224100 Sobic001G410300--Sobic004G224100 Sobic001G410300--Sobic004G337700 Sobic007G189900 Sobic007G189900 Sobic001G410300--Sobic007G189900 Sobic010G249600--Sobic003G440500 Sobic002G398600 Sobic002G398600 Sobic010G249600--Sobic002G398600 Sobic002G377400 Sobic002G377400 Sobic010G249600--Sobic002G377400 Sobic003G308900 Sobic003G308900 Sobic010G249600--Sobic003G308900 Sobic008G016800 Sobic008G016800 Sobic010G249600--Sobic008G016800 Sobic010G249600--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic010G249600--Sobic002G085600 Sobic004G224000 Sobic004G224000 Sobic010G249600--Sobic004G224000 Sobic010G249600--Sobic001G191300 Sobic002G358200 Sobic002G358200 Sobic001G033800--Sobic002G358200 Sobic001G033800--Sobic009G036366 Sobic001G033800--Sobic004G295900 Sobic001G033800--Sobic002G288500 Sobic010G210050 Sobic010G210050 Sobic001G033800--Sobic010G210050 Sobic001G033800--Sobic006G088450 Sobic001G033800--Sobic009G149600 Sobic001G033800--Sobic002G104500 Sobic001G033800--Sobic003G159400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.