Gene annotation
Transcriptome id Sobic.006G030001.1
Synonym -
Functional annotation -
UniProt A0A1Z5RCQ3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39780 : ribonuclease 2
RAP-DB (Rice) LOC_Os01g67180.1 : ribonuclease T2 family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026434
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G371100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@POT family protein, expressed -
2 Sobic.003G084600 - -
3 Sobic.003G027350 - -
4 Sobic.010G012001 - -
5 Sobic.003G231700 MYB family transcription factor, putative -
6 Sobic.007G226200 - -
7 Sobic.001G355600 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.002G197800 ZOS4-05 - C2H2 zinc finger protein, expressed -
9 Sobic.006G047700 "Gene located in Ma1, a phosphatidylethanolamine-binding (PEBP) protein domain, "(PubMedID : 27335143)@osFTL13 FT-Like13 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
10 Sobic.003G326400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.010G195450 - -
12 Sobic.004G254500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
13 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
14 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
15 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
16 Sobic.003G237600 expressed protein -
17 Sobic.006G135575 - -
18 Sobic.002G381100 expressed protein -
19 Sobic.003G036100 - -
20 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic006G030001 Sobic006G030001 Sobic003G371100 Sobic003G371100 Sobic006G030001--Sobic003G371100 Sobic003G084600 Sobic003G084600 Sobic006G030001--Sobic003G084600 Sobic003G027350 Sobic003G027350 Sobic006G030001--Sobic003G027350 Sobic010G012001 Sobic010G012001 Sobic006G030001--Sobic010G012001 Sobic003G231700 Sobic003G231700 Sobic006G030001--Sobic003G231700 Sobic007G226200 Sobic007G226200 Sobic006G030001--Sobic007G226200 Sobic001G355600 Sobic001G355600 Sobic006G030001--Sobic001G355600 Sobic002G197800 Sobic002G197800 Sobic006G030001--Sobic002G197800 Sobic006G047700 Sobic006G047700 Sobic006G030001--Sobic006G047700 Sobic003G371100--Sobic001G355600 Sobic003G371100--Sobic007G226200 Sobic002G213000 Sobic002G213000 Sobic003G371100--Sobic002G213000 Sobic001G189100 Sobic001G189100 Sobic003G371100--Sobic001G189100 Sobic003G237600 Sobic003G237600 Sobic003G371100--Sobic003G237600 Sobic003G326400 Sobic003G326400 Sobic003G371100--Sobic003G326400 Sobic009G222200 Sobic009G222200 Sobic003G371100--Sobic009G222200 Sobic003G344700 Sobic003G344700 Sobic003G371100--Sobic003G344700 Sobic003G084600--Sobic006G030001 Sobic003G084600--Sobic003G371100 Sobic003G084600--Sobic007G226200 Sobic003G084600--Sobic003G231700 Sobic003G057900 Sobic003G057900 Sobic003G084600--Sobic003G057900 Sobic001G192100 Sobic001G192100 Sobic003G084600--Sobic001G192100 Sobic004G295000 Sobic004G295000 Sobic003G084600--Sobic004G295000 Sobic007G101500 Sobic007G101500 Sobic003G084600--Sobic007G101500 Sobic003G084600--Sobic003G027350 Sobic008G144201 Sobic008G144201 Sobic003G027350--Sobic008G144201 Sobic008G181250 Sobic008G181250 Sobic003G027350--Sobic008G181250 Sobic003G415200 Sobic003G415200 Sobic003G027350--Sobic003G415200 Sobic005G083220 Sobic005G083220 Sobic003G027350--Sobic005G083220 Sobic009G019700 Sobic009G019700 Sobic003G027350--Sobic009G019700 Sobic005G148100 Sobic005G148100 Sobic003G027350--Sobic005G148100 Sobic005G189000 Sobic005G189000 Sobic003G027350--Sobic005G189000 Sobic005G189800 Sobic005G189800 Sobic003G027350--Sobic005G189800 Sobic010G136100 Sobic010G136100 Sobic003G027350--Sobic010G136100 Sobic003G404000 Sobic003G404000 Sobic010G012001--Sobic003G404000 Sobic008G030900 Sobic008G030900 Sobic010G012001--Sobic008G030900 Sobic010G012001--Sobic006G030001 Sobic002G240500 Sobic002G240500 Sobic010G012001--Sobic002G240500 Sobic002G118300 Sobic002G118300 Sobic010G012001--Sobic002G118300 Sobic001G017500 Sobic001G017500 Sobic010G012001--Sobic001G017500 Sobic001G544400 Sobic001G544400 Sobic010G012001--Sobic001G544400 Sobic002G391100 Sobic002G391100 Sobic010G012001--Sobic002G391100 Sobic003G236200 Sobic003G236200 Sobic010G012001--Sobic003G236200 Sobic003G231700--Sobic003G027350 Sobic003G231700--Sobic006G030001 Sobic004G087366 Sobic004G087366 Sobic003G231700--Sobic004G087366 Sobic001G220132 Sobic001G220132 Sobic003G231700--Sobic001G220132 Sobic007G226200--Sobic003G371100 Sobic002G195100 Sobic002G195100 Sobic007G226200--Sobic002G195100 Sobic005G065500 Sobic005G065500 Sobic007G226200--Sobic005G065500 Sobic001G098600 Sobic001G098600 Sobic007G226200--Sobic001G098600 Sobic006G006700 Sobic006G006700 Sobic007G226200--Sobic006G006700 Sobic007G226200--Sobic002G213000 Sobic010G157000 Sobic010G157000 Sobic007G226200--Sobic010G157000 Sobic007G226200--Sobic003G237600 Sobic007G226200--Sobic001G189100 Sobic001G355600--Sobic001G189100 Sobic001G355600--Sobic003G237600 Sobic001G355600--Sobic009G222200 Sobic001G355600--Sobic003G371100 Sobic003G036100 Sobic003G036100 Sobic001G355600--Sobic003G036100 Sobic010G183100 Sobic010G183100 Sobic001G355600--Sobic010G183100 Sobic008G106200 Sobic008G106200 Sobic001G355600--Sobic008G106200 Sobic009G254600 Sobic009G254600 Sobic001G355600--Sobic009G254600 Sobic002G197800--Sobic006G047700 Sobic010G195450 Sobic010G195450 Sobic002G197800--Sobic010G195450 Sobic004G254500 Sobic004G254500 Sobic002G197800--Sobic004G254500 Sobic010G054800 Sobic010G054800 Sobic002G197800--Sobic010G054800 Sobic001G541400 Sobic001G541400 Sobic002G197800--Sobic001G541400 Sobic005G073700 Sobic005G073700 Sobic002G197800--Sobic005G073700 Sobic002G244800 Sobic002G244800 Sobic002G197800--Sobic002G244800 Sobic003G326200 Sobic003G326200 Sobic002G197800--Sobic003G326200 Sobic007G050900 Sobic007G050900 Sobic002G197800--Sobic007G050900 Sobic006G047700--Sobic002G197800 Sobic006G047700--Sobic004G254500 Sobic006G047700--Sobic010G054800 Sobic006G047700--Sobic010G195450 Sobic006G047700--Sobic005G073700 Sobic006G047700--Sobic007G050900 Sobic006G047700--Sobic002G244800 Sobic003G100000 Sobic003G100000 Sobic006G047700--Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic006G047700--Sobic001G254700
Octagon: transcription factors


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