Gene annotation
Transcriptome id Sobic.006G030300.1
Synonym Sb06g003120
Functional annotation receptor kinase, putative, expressed
UniProt A0A1Z5RBZ8
Pfam PF08263 PF00560 PF07714 PF13855
Panther DB PTHR27000 PTHR27000:SF213
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os04g15660.1 : receptor kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G022300 OsWAK116 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
2 Sobic.002G328000 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.008G060000 receptor-like protein kinase 2 precursor, putative, expressed -
4 Sobic.001G270900 expressed protein -
5 Sobic.006G030400 xa21, putative, expressed -
6 Sobic.007G123500 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
7 Sobic.002G412100 flowering promoting factor-like 1, putative, expressed -
8 Sobic.001G223550 - -
9 Sobic.004G253050 - -
10 Sobic.003G386600 calreticulin precursor protein, putative, expressed K08057: calreticulin
11 Sobic.003G203300 stress regulated protein, putative, expressed -
12 Sobic.010G099700 peptide transporter PTR2, putative, expressed -
13 Sobic.002G137000 protein kinase, putative, expressed -
14 Sobic.007G000900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
15 Sobic.001G333800 MYB family transcription factor, putative, expressed -
16 Sobic.001G413000 ABC transporter family protein, putative, expressed -
17 Sobic.006G024200 receptor-like protein kinase, putative, expressed -
18 Sobic.002G272200 - -
19 Sobic.008G104701 - -
20 Sobic.002G390500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pyruvate dehydrogenase kinase(PubMedID : 27016024)@kinase, putative, expressed K00898: pyruvate dehydrogenase kinase 2/3/4


Gene co-expression network
sample Sobic006G030300 Sobic006G030300 Sobic008G022300 Sobic008G022300 Sobic006G030300--Sobic008G022300 Sobic002G328000 Sobic002G328000 Sobic006G030300--Sobic002G328000 Sobic008G060000 Sobic008G060000 Sobic006G030300--Sobic008G060000 Sobic001G270900 Sobic001G270900 Sobic006G030300--Sobic001G270900 Sobic006G030400 Sobic006G030400 Sobic006G030300--Sobic006G030400 Sobic007G123500 Sobic007G123500 Sobic006G030300--Sobic007G123500 Sobic002G412100 Sobic002G412100 Sobic006G030300--Sobic002G412100 Sobic001G223550 Sobic001G223550 Sobic006G030300--Sobic001G223550 Sobic004G253050 Sobic004G253050 Sobic006G030300--Sobic004G253050 Sobic003G343500 Sobic003G343500 Sobic008G022300--Sobic003G343500 Sobic002G276100 Sobic002G276100 Sobic008G022300--Sobic002G276100 Sobic008G146900 Sobic008G146900 Sobic008G022300--Sobic008G146900 Sobic003G110800 Sobic003G110800 Sobic008G022300--Sobic003G110800 Sobic001G381200 Sobic001G381200 Sobic008G022300--Sobic001G381200 Sobic010G196500 Sobic010G196500 Sobic008G022300--Sobic010G196500 Sobic001G418700 Sobic001G418700 Sobic008G022300--Sobic001G418700 Sobic004G189900 Sobic004G189900 Sobic008G022300--Sobic004G189900 Sobic006G043300 Sobic006G043300 Sobic008G022300--Sobic006G043300 Sobic002G328000--Sobic008G022300 Sobic002G328000--Sobic006G030300 Sobic003G396200 Sobic003G396200 Sobic002G328000--Sobic003G396200 Sobic009G016600 Sobic009G016600 Sobic002G328000--Sobic009G016600 Sobic008G166400 Sobic008G166400 Sobic002G328000--Sobic008G166400 Sobic002G249300 Sobic002G249300 Sobic002G328000--Sobic002G249300 Sobic004G267800 Sobic004G267800 Sobic002G328000--Sobic004G267800 Sobic001G481800 Sobic001G481800 Sobic002G328000--Sobic001G481800 Sobic006G030600 Sobic006G030600 Sobic002G328000--Sobic006G030600 Sobic003G029500 Sobic003G029500 Sobic008G060000--Sobic003G029500 Sobic006G219600 Sobic006G219600 Sobic008G060000--Sobic006G219600 Sobic009G074400 Sobic009G074400 Sobic008G060000--Sobic009G074400 Sobic006G050700 Sobic006G050700 Sobic008G060000--Sobic006G050700 Sobic006G051800 Sobic006G051800 Sobic008G060000--Sobic006G051800 Sobic006G133900 Sobic006G133900 Sobic008G060000--Sobic006G133900 Sobic004G181600 Sobic004G181600 Sobic008G060000--Sobic004G181600 Sobic002G198200 Sobic002G198200 Sobic008G060000--Sobic002G198200 Sobic001G333800 Sobic001G333800 Sobic008G060000--Sobic001G333800 Sobic008G115900 Sobic008G115900 Sobic001G270900--Sobic008G115900 Sobic008G094000 Sobic008G094000 Sobic001G270900--Sobic008G094000 Sobic001G270900--Sobic003G343500 Sobic010G176200 Sobic010G176200 Sobic001G270900--Sobic010G176200 Sobic001G531500 Sobic001G531500 Sobic001G270900--Sobic001G531500 Sobic008G130000 Sobic008G130000 Sobic001G270900--Sobic008G130000 Sobic003G229300 Sobic003G229300 Sobic001G270900--Sobic003G229300 Sobic001G017300 Sobic001G017300 Sobic001G270900--Sobic001G017300 Sobic004G356400 Sobic004G356400 Sobic001G270900--Sobic004G356400 Sobic004G026500 Sobic004G026500 Sobic006G030400--Sobic004G026500 Sobic008G081900 Sobic008G081900 Sobic006G030400--Sobic008G081900 Sobic007G169300 Sobic007G169300 Sobic006G030400--Sobic007G169300 Sobic010G197000 Sobic010G197000 Sobic006G030400--Sobic010G197000 Sobic005G110532 Sobic005G110532 Sobic006G030400--Sobic005G110532 Sobic003G190000 Sobic003G190000 Sobic006G030400--Sobic003G190000 Sobic003G203300 Sobic003G203300 Sobic006G030400--Sobic003G203300 Sobic001G219700 Sobic001G219700 Sobic006G030400--Sobic001G219700 Sobic005G075100 Sobic005G075100 Sobic006G030400--Sobic005G075100 Sobic004G120100 Sobic004G120100 Sobic007G123500--Sobic004G120100 Sobic003G160200 Sobic003G160200 Sobic007G123500--Sobic003G160200 Sobic007G123500--Sobic008G115900 Sobic007G123500--Sobic010G176200 Sobic005G084500 Sobic005G084500 Sobic007G123500--Sobic005G084500 Sobic007G123500--Sobic008G130000 Sobic007G136200 Sobic007G136200 Sobic007G123500--Sobic007G136200 Sobic001G516901 Sobic001G516901 Sobic007G123500--Sobic001G516901 Sobic007G123500--Sobic001G333800 Sobic002G390500 Sobic002G390500 Sobic002G412100--Sobic002G390500 Sobic010G135600 Sobic010G135600 Sobic002G412100--Sobic010G135600 Sobic002G136100 Sobic002G136100 Sobic002G412100--Sobic002G136100 Sobic002G412100--Sobic003G343500 Sobic002G412100--Sobic001G333800 Sobic001G283100 Sobic001G283100 Sobic002G412100--Sobic001G283100 Sobic006G259600 Sobic006G259600 Sobic002G412100--Sobic006G259600 Sobic010G099700 Sobic010G099700 Sobic002G412100--Sobic010G099700 Sobic002G412100--Sobic004G356400 Sobic010G145500 Sobic010G145500 Sobic001G223550--Sobic010G145500 Sobic004G034600 Sobic004G034600 Sobic001G223550--Sobic004G034600 Sobic001G223550--Sobic002G249300 Sobic005G133600 Sobic005G133600 Sobic001G223550--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic001G223550--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic001G223550--Sobic005G089400 Sobic001G233300 Sobic001G233300 Sobic001G223550--Sobic001G233300 Sobic008G081800 Sobic008G081800 Sobic001G223550--Sobic008G081800 Sobic001G459600 Sobic001G459600 Sobic001G223550--Sobic001G459600 Sobic006G092000 Sobic006G092000 Sobic004G253050--Sobic006G092000 Sobic003G262200 Sobic003G262200 Sobic004G253050--Sobic003G262200 Sobic004G253050--Sobic008G115900 Sobic004G253050--Sobic001G270900 Sobic004G253050--Sobic003G229300 Sobic004G253050--Sobic006G050700 Sobic003G138500 Sobic003G138500 Sobic004G253050--Sobic003G138500 Sobic003G247500 Sobic003G247500 Sobic004G253050--Sobic003G247500 Sobic004G253050--Sobic007G123500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.