Gene annotation
Transcriptome id Sobic.002G328000.2,Sobic.002G328000.1
Synonym Sb02g035465, CRK10, RLK4
Functional annotation TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1W0W6T0 , A0A1W0W6Q9
Pfam PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF127
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23160 : cysteine-rich RLK (RECEPTOR-like protein kinase) 8
RAP-DB (Rice) LOC_Os07g35410.1 : TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a048297
Brachypodium KQK15885 , KQK15884
Barley HORVU2Hr1G044510.2 , HORVU2Hr1G044510.3 , HORVU2Hr1G044510.1 , HORVU2Hr1G044510.6 , HORVU2Hr1G044510.7 , HORVU2Hr1G044510.4 , HORVU2Hr1G044510.5 , HORVU2Hr1G044510.8 , HORVU2Hr1G044510.9 , HORVU1Hr1G092290.5 , HORVU1Hr1G092290.4 , HORVU1Hr1G092290.7 , HORVU1Hr1G092290.6 , HORVU1Hr1G092290.1 , HORVU1Hr1G092290.3 , HORVU1Hr1G092290.2 , HORVU1Hr1G092290.9 , HORVU1Hr1G092290.8 , HORVU2Hr1G044510.11 , HORVU2Hr1G044510.12 , HORVU2Hr1G044510.13 , HORVU2Hr1G044510.14 , HORVU2Hr1G044510.15 , HORVU2Hr1G044510.16 , HORVU2Hr1G044510.17 , HORVU2Hr1G044510.18 , HORVU2Hr1G044510.19 , HORVU2Hr1G044510.22 , HORVU2Hr1G044510.27 , HORVU2Hr1G044510.21 , HORVU2Hr1G044510.20 , HORVU2Hr1G044510.23 , HORVU2Hr1G044510.25 , HORVU2Hr1G044510.24 , HORVU2Hr1G044510.26 , HORVU1Hr1G092290.10
Wheat TraesCS2D02G221900 , TraesCS1D02G431400 , TraesCS1D02G431400 , TraesCS2B02G241400 , TraesCS2B02G241400 , TraesCS1D02G431000 , TraesCS1D02G431000 , TraesCS1A02G422600 , TraesCS1A02G422600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G022300 OsWAK116 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
2 Sobic.006G030300 receptor kinase, putative, expressed -
3 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9
4 Sobic.009G016600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.008G166400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
7 Sobic.004G267800 nmrA-like family domain containing protein, expressed -
8 Sobic.001G481800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.006G030600 xa21, putative, expressed -
10 Sobic.003G174301 - -
11 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
12 Sobic.003G146500 red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
13 Sobic.010G196500 zinc-binding protein, putative, expressed -
14 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
15 Sobic.001G512500 expressed protein -
16 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.001G433000 FAR1 family protein, expressed -
18 Sobic.003G010300 cytochrome P450, putative, expressed -
19 Sobic.003G163900 CC-NBS-LRR protein, putative, expressed -
20 Sobic.007G063300 reductase, putative, expressed -


Gene co-expression network
sample Sobic002G328000 Sobic002G328000 Sobic008G022300 Sobic008G022300 Sobic002G328000--Sobic008G022300 Sobic006G030300 Sobic006G030300 Sobic002G328000--Sobic006G030300 Sobic003G396200 Sobic003G396200 Sobic002G328000--Sobic003G396200 Sobic009G016600 Sobic009G016600 Sobic002G328000--Sobic009G016600 Sobic008G166400 Sobic008G166400 Sobic002G328000--Sobic008G166400 Sobic002G249300 Sobic002G249300 Sobic002G328000--Sobic002G249300 Sobic004G267800 Sobic004G267800 Sobic002G328000--Sobic004G267800 Sobic001G481800 Sobic001G481800 Sobic002G328000--Sobic001G481800 Sobic006G030600 Sobic006G030600 Sobic002G328000--Sobic006G030600 Sobic003G343500 Sobic003G343500 Sobic008G022300--Sobic003G343500 Sobic002G276100 Sobic002G276100 Sobic008G022300--Sobic002G276100 Sobic008G146900 Sobic008G146900 Sobic008G022300--Sobic008G146900 Sobic003G110800 Sobic003G110800 Sobic008G022300--Sobic003G110800 Sobic001G381200 Sobic001G381200 Sobic008G022300--Sobic001G381200 Sobic010G196500 Sobic010G196500 Sobic008G022300--Sobic010G196500 Sobic001G418700 Sobic001G418700 Sobic008G022300--Sobic001G418700 Sobic004G189900 Sobic004G189900 Sobic008G022300--Sobic004G189900 Sobic006G043300 Sobic006G043300 Sobic008G022300--Sobic006G043300 Sobic006G030300--Sobic008G022300 Sobic006G030300--Sobic002G328000 Sobic008G060000 Sobic008G060000 Sobic006G030300--Sobic008G060000 Sobic001G270900 Sobic001G270900 Sobic006G030300--Sobic001G270900 Sobic006G030400 Sobic006G030400 Sobic006G030300--Sobic006G030400 Sobic007G123500 Sobic007G123500 Sobic006G030300--Sobic007G123500 Sobic002G412100 Sobic002G412100 Sobic006G030300--Sobic002G412100 Sobic001G223550 Sobic001G223550 Sobic006G030300--Sobic001G223550 Sobic004G253050 Sobic004G253050 Sobic006G030300--Sobic004G253050 Sobic010G256700 Sobic010G256700 Sobic003G396200--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic003G396200--Sobic007G193700 Sobic001G159400 Sobic001G159400 Sobic003G396200--Sobic001G159400 Sobic007G116200 Sobic007G116200 Sobic003G396200--Sobic007G116200 Sobic006G131500 Sobic006G131500 Sobic003G396200--Sobic006G131500 Sobic002G127550 Sobic002G127550 Sobic003G396200--Sobic002G127550 Sobic004G209600 Sobic004G209600 Sobic003G396200--Sobic004G209600 Sobic001G375100 Sobic001G375100 Sobic003G396200--Sobic001G375100 Sobic006G216800 Sobic006G216800 Sobic003G396200--Sobic006G216800 Sobic010G192800 Sobic010G192800 Sobic009G016600--Sobic010G192800 Sobic007G084300 Sobic007G084300 Sobic009G016600--Sobic007G084300 Sobic009G211000 Sobic009G211000 Sobic009G016600--Sobic009G211000 Sobic009G016600--Sobic002G249300 Sobic002G165140 Sobic002G165140 Sobic009G016600--Sobic002G165140 Sobic006G143000 Sobic006G143000 Sobic009G016600--Sobic006G143000 Sobic007G063300 Sobic007G063300 Sobic009G016600--Sobic007G063300 Sobic003G174301 Sobic003G174301 Sobic009G016600--Sobic003G174301 Sobic009G226600 Sobic009G226600 Sobic009G016600--Sobic009G226600 Sobic002G124600 Sobic002G124600 Sobic008G166400--Sobic002G124600 Sobic002G117500 Sobic002G117500 Sobic008G166400--Sobic002G117500 Sobic001G038601 Sobic001G038601 Sobic008G166400--Sobic001G038601 Sobic001G530900 Sobic001G530900 Sobic008G166400--Sobic001G530900 Sobic002G033300 Sobic002G033300 Sobic008G166400--Sobic002G033300 Sobic001G219700 Sobic001G219700 Sobic008G166400--Sobic001G219700 Sobic002G118200 Sobic002G118200 Sobic008G166400--Sobic002G118200 Sobic006G065600 Sobic006G065600 Sobic008G166400--Sobic006G065600 Sobic004G181600 Sobic004G181600 Sobic008G166400--Sobic004G181600 Sobic004G034600 Sobic004G034600 Sobic002G249300--Sobic004G034600 Sobic002G249300--Sobic003G174301 Sobic002G249300--Sobic001G223550 Sobic005G149700 Sobic005G149700 Sobic002G249300--Sobic005G149700 Sobic009G011600 Sobic009G011600 Sobic002G249300--Sobic009G011600 Sobic001G233300 Sobic001G233300 Sobic002G249300--Sobic001G233300 Sobic001G252000 Sobic001G252000 Sobic002G249300--Sobic001G252000 Sobic001G496100 Sobic001G496100 Sobic002G249300--Sobic001G496100 Sobic007G010700 Sobic007G010700 Sobic002G249300--Sobic007G010700 Sobic004G356700 Sobic004G356700 Sobic004G267800--Sobic004G356700 Sobic010G125500 Sobic010G125500 Sobic004G267800--Sobic010G125500 Sobic008G044100 Sobic008G044100 Sobic004G267800--Sobic008G044100 Sobic008G130100 Sobic008G130100 Sobic004G267800--Sobic008G130100 Sobic003G398700 Sobic003G398700 Sobic004G267800--Sobic003G398700 Sobic003G155100 Sobic003G155100 Sobic004G267800--Sobic003G155100 Sobic004G134200 Sobic004G134200 Sobic004G267800--Sobic004G134200 Sobic003G340600 Sobic003G340600 Sobic004G267800--Sobic003G340600 Sobic007G136800 Sobic007G136800 Sobic004G267800--Sobic007G136800 Sobic003G220800 Sobic003G220800 Sobic001G481800--Sobic003G220800 Sobic009G201300 Sobic009G201300 Sobic001G481800--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic001G481800--Sobic003G354600 Sobic003G119600 Sobic003G119600 Sobic001G481800--Sobic003G119600 Sobic009G239200 Sobic009G239200 Sobic001G481800--Sobic009G239200 Sobic004G034800 Sobic004G034800 Sobic001G481800--Sobic004G034800 Sobic002G167500 Sobic002G167500 Sobic001G481800--Sobic002G167500 Sobic001G136800 Sobic001G136800 Sobic001G481800--Sobic001G136800 Sobic003G086900 Sobic003G086900 Sobic001G481800--Sobic003G086900 Sobic006G030600--Sobic007G084300 Sobic006G030600--Sobic004G034600 Sobic006G030600--Sobic007G193700 Sobic004G131040 Sobic004G131040 Sobic006G030600--Sobic004G131040 Sobic006G030600--Sobic010G196500 Sobic006G030600--Sobic003G086900 Sobic002G193100 Sobic002G193100 Sobic006G030600--Sobic002G193100 Sobic006G030600--Sobic006G143000 Sobic002G181300 Sobic002G181300 Sobic006G030600--Sobic002G181300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.