Gene annotation
Transcriptome id Sobic.008G104701.1
Synonym -
Functional annotation -
UniProt A0A1Z5R620
Pfam -
Panther DB PTHR12606 PTHR12606:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g06830.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
2 Sobic.003G097600 - -
3 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
4 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
5 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
6 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
7 Sobic.010G125833 - -
8 Sobic.001G504400 expressed protein -
9 Sobic.004G121400 CAX 1c(PubMedID : 22196357)@cation exchanger 3(PubMedID : 26320239)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
10 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.005G118400 expressed protein -
12 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.003G398800 expressed protein -
14 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
15 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
16 Sobic.007G103400 expressed protein -
17 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
18 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
19 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
20 Sobic.007G136200 expressed protein -


Gene co-expression network
sample Sobic008G104701 Sobic008G104701 Sobic003G185900 Sobic003G185900 Sobic008G104701--Sobic003G185900 Sobic003G097600 Sobic003G097600 Sobic008G104701--Sobic003G097600 Sobic008G033000 Sobic008G033000 Sobic008G104701--Sobic008G033000 Sobic006G142600 Sobic006G142600 Sobic008G104701--Sobic006G142600 Sobic010G043800 Sobic010G043800 Sobic008G104701--Sobic010G043800 Sobic001G378100 Sobic001G378100 Sobic008G104701--Sobic001G378100 Sobic010G125833 Sobic010G125833 Sobic008G104701--Sobic010G125833 Sobic001G504400 Sobic001G504400 Sobic008G104701--Sobic001G504400 Sobic004G121400 Sobic004G121400 Sobic008G104701--Sobic004G121400 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic001G258200 Sobic001G258200 Sobic003G185900--Sobic001G258200 Sobic010G067100 Sobic010G067100 Sobic003G185900--Sobic010G067100 Sobic007G105500 Sobic007G105500 Sobic003G185900--Sobic007G105500 Sobic004G215800 Sobic004G215800 Sobic003G185900--Sobic004G215800 Sobic005G068700 Sobic005G068700 Sobic003G185900--Sobic005G068700 Sobic009G038701 Sobic009G038701 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic008G129900 Sobic008G129900 Sobic003G097600--Sobic008G129900 Sobic007G006400 Sobic007G006400 Sobic003G097600--Sobic007G006400 Sobic003G097600--Sobic004G215800 Sobic003G097600--Sobic003G185900 Sobic003G097600--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic003G097600--Sobic004G112100 Sobic004G082300 Sobic004G082300 Sobic003G097600--Sobic004G082300 Sobic003G097600--Sobic009G038701 Sobic003G097600--Sobic001G258200 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic001G217900 Sobic001G217900 Sobic008G033000--Sobic001G217900 Sobic008G033000--Sobic010G125833 Sobic002G206300 Sobic002G206300 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic008G033000--Sobic009G038701 Sobic006G142600--Sobic010G043800 Sobic003G306200 Sobic003G306200 Sobic006G142600--Sobic003G306200 Sobic007G103400 Sobic007G103400 Sobic006G142600--Sobic007G103400 Sobic007G108900 Sobic007G108900 Sobic006G142600--Sobic007G108900 Sobic007G136200 Sobic007G136200 Sobic006G142600--Sobic007G136200 Sobic001G169900 Sobic001G169900 Sobic006G142600--Sobic001G169900 Sobic006G158100 Sobic006G158100 Sobic006G142600--Sobic006G158100 Sobic002G198300 Sobic002G198300 Sobic006G142600--Sobic002G198300 Sobic003G094100 Sobic003G094100 Sobic006G142600--Sobic003G094100 Sobic009G121000 Sobic009G121000 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G002700 Sobic010G002700 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic010G043800--Sobic001G378100 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G077300 Sobic001G077300 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G378100--Sobic001G258200 Sobic010G125833--Sobic009G038701 Sobic010G125833--Sobic001G504400 Sobic010G125833--Sobic002G206300 Sobic010G125833--Sobic008G033000 Sobic010G125833--Sobic002G198300 Sobic010G125833--Sobic003G185900 Sobic010G125833--Sobic008G129900 Sobic002G298800 Sobic002G298800 Sobic010G125833--Sobic002G298800 Sobic001G180200 Sobic001G180200 Sobic010G125833--Sobic001G180200 Sobic001G504400--Sobic002G206300 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic001G504400--Sobic010G125833 Sobic001G504400--Sobic008G033000 Sobic001G504400--Sobic001G180200 Sobic001G504400--Sobic001G378100 Sobic003G398800 Sobic003G398800 Sobic004G121400--Sobic003G398800 Sobic001G003200 Sobic001G003200 Sobic004G121400--Sobic001G003200 Sobic004G154200 Sobic004G154200 Sobic004G121400--Sobic004G154200 Sobic001G048400 Sobic001G048400 Sobic004G121400--Sobic001G048400 Sobic004G121400--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic004G121400--Sobic003G367500 Sobic009G056700 Sobic009G056700 Sobic004G121400--Sobic009G056700 Sobic004G308700 Sobic004G308700 Sobic004G121400--Sobic004G308700 Sobic004G121400--Sobic010G125833
Octagon: transcription factors


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