Gene annotation
Transcriptome id Sobic.006G039500.1
Synonym ATHAL3, ATHAL3A, HAL3A, HAL3, Sb06g007540
Functional annotation phosphopantothenoylcysteine decarboxylase, putative, expressed
UniProt C5YDT4
Pfam PF02441
Panther DB PTHR14359
NCBI CDD KOG0672; Halotolerance protein HAL3 (contains flavoprotein domain)
KEGG Orthology K01598; PPCDC, phosphopantothenoylcysteine decarboxylase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT3G18030 : HAL3-like protein A
RAP-DB (Rice) LOC_Os06g09910.2 : phosphopantothenoylcysteine decarboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a023000
Brachypodium -
Barley HORVU3Hr1G027500.5 , HORVU3Hr1G027500.3 , HORVU3Hr1G027500.2
Wheat TraesCS3D02G143900 , TraesCS3B02G161400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G351200 B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
2 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
3 Sobic.010G142650 - -
4 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
5 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
6 Sobic.009G061500 - -
7 Sobic.001G135800 pentatricopeptide, putative, expressed -
8 Sobic.004G014500 THION20 - Plant thionin family protein precursor, putative, expressed -
9 Sobic.009G202000 GATA zinc finger domain containing protein, expressed -
10 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
11 Sobic.003G441000 rhoGAP domain containing protein, expressed -
12 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
13 Sobic.006G214900 - -
14 Sobic.009G090566 - -
15 Sobic.002G078200 - -
16 Sobic.001G281201 - -
17 Sobic.003G297100 expressed protein -
18 Sobic.005G114201 - -
19 Sobic.006G143700 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
20 Sobic.001G133400 - -


Gene co-expression network
sample Sobic006G039500 Sobic006G039500 Sobic003G351200 Sobic003G351200 Sobic006G039500--Sobic003G351200 Sobic006G171600 Sobic006G171600 Sobic006G039500--Sobic006G171600 Sobic010G142650 Sobic010G142650 Sobic006G039500--Sobic010G142650 Sobic004G250800 Sobic004G250800 Sobic006G039500--Sobic004G250800 Sobic006G115700 Sobic006G115700 Sobic006G039500--Sobic006G115700 Sobic009G061500 Sobic009G061500 Sobic006G039500--Sobic009G061500 Sobic001G135800 Sobic001G135800 Sobic006G039500--Sobic001G135800 Sobic004G014500 Sobic004G014500 Sobic006G039500--Sobic004G014500 Sobic009G202000 Sobic009G202000 Sobic006G039500--Sobic009G202000 Sobic009G090566 Sobic009G090566 Sobic003G351200--Sobic009G090566 Sobic003G441000 Sobic003G441000 Sobic003G351200--Sobic003G441000 Sobic003G351200--Sobic010G142650 Sobic010G111000 Sobic010G111000 Sobic003G351200--Sobic010G111000 Sobic006G214900 Sobic006G214900 Sobic003G351200--Sobic006G214900 Sobic004G120600 Sobic004G120600 Sobic003G351200--Sobic004G120600 Sobic006G069766 Sobic006G069766 Sobic003G351200--Sobic006G069766 Sobic002G283200 Sobic002G283200 Sobic003G351200--Sobic002G283200 Sobic005G114201 Sobic005G114201 Sobic003G351200--Sobic005G114201 Sobic006G171600--Sobic006G115700 Sobic006G171600--Sobic010G142650 Sobic009G242200 Sobic009G242200 Sobic006G171600--Sobic009G242200 Sobic004G290600 Sobic004G290600 Sobic006G171600--Sobic004G290600 Sobic006G204500 Sobic006G204500 Sobic006G171600--Sobic006G204500 Sobic010G003200 Sobic010G003200 Sobic006G171600--Sobic010G003200 Sobic003G297100 Sobic003G297100 Sobic006G171600--Sobic003G297100 Sobic002G340600 Sobic002G340600 Sobic006G171600--Sobic002G340600 Sobic002G364700 Sobic002G364700 Sobic006G171600--Sobic002G364700 Sobic010G142650--Sobic006G214900 Sobic010G142650--Sobic005G114201 Sobic007G223400 Sobic007G223400 Sobic010G142650--Sobic007G223400 Sobic006G001700 Sobic006G001700 Sobic010G142650--Sobic006G001700 Sobic008G153700 Sobic008G153700 Sobic010G142650--Sobic008G153700 Sobic006G001650 Sobic006G001650 Sobic010G142650--Sobic006G001650 Sobic002G166000 Sobic002G166000 Sobic010G142650--Sobic002G166000 Sobic003G102900 Sobic003G102900 Sobic010G142650--Sobic003G102900 Sobic001G488950 Sobic001G488950 Sobic010G142650--Sobic001G488950 Sobic004G250800--Sobic006G115700 Sobic004G250800--Sobic006G171600 Sobic008G007600 Sobic008G007600 Sobic004G250800--Sobic008G007600 Sobic004G250800--Sobic002G364700 Sobic002G299500 Sobic002G299500 Sobic004G250800--Sobic002G299500 Sobic004G250800--Sobic009G061500 Sobic008G165401 Sobic008G165401 Sobic004G250800--Sobic008G165401 Sobic002G307400 Sobic002G307400 Sobic004G250800--Sobic002G307400 Sobic004G250800--Sobic001G135800 Sobic006G115700--Sobic003G297100 Sobic007G142801 Sobic007G142801 Sobic006G115700--Sobic007G142801 Sobic006G115700--Sobic001G135800 Sobic006G115700--Sobic002G364700 Sobic009G061601 Sobic009G061601 Sobic006G115700--Sobic009G061601 Sobic001G432200 Sobic001G432200 Sobic006G115700--Sobic001G432200 Sobic005G176700 Sobic005G176700 Sobic006G115700--Sobic005G176700 Sobic006G115700--Sobic006G204500 Sobic001G370400 Sobic001G370400 Sobic006G115700--Sobic001G370400 Sobic009G061500--Sobic009G061601 Sobic008G136601 Sobic008G136601 Sobic009G061500--Sobic008G136601 Sobic009G061500--Sobic003G297100 Sobic001G340800 Sobic001G340800 Sobic009G061500--Sobic001G340800 Sobic008G020800 Sobic008G020800 Sobic009G061500--Sobic008G020800 Sobic009G061500--Sobic005G114201 Sobic008G148600 Sobic008G148600 Sobic009G061500--Sobic008G148600 Sobic009G061500--Sobic001G370400 Sobic007G095333 Sobic007G095333 Sobic009G061500--Sobic007G095333 Sobic001G135800--Sobic006G115700 Sobic001G135800--Sobic007G142801 Sobic001G135800--Sobic003G297100 Sobic001G172100 Sobic001G172100 Sobic001G135800--Sobic001G172100 Sobic005G026700 Sobic005G026700 Sobic001G135800--Sobic005G026700 Sobic003G164400 Sobic003G164400 Sobic001G135800--Sobic003G164400 Sobic002G000200 Sobic002G000200 Sobic001G135800--Sobic002G000200 Sobic005G002100 Sobic005G002100 Sobic001G135800--Sobic005G002100 Sobic001G135800--Sobic009G061500 Sobic004G014500--Sobic006G171600 Sobic004G014500--Sobic010G142650 Sobic004G014500--Sobic004G250800 Sobic001G442400 Sobic001G442400 Sobic004G014500--Sobic001G442400 Sobic004G014500--Sobic009G202000 Sobic004G014500--Sobic010G003200 Sobic004G014500--Sobic006G115700 Sobic005G110160 Sobic005G110160 Sobic004G014500--Sobic005G110160 Sobic001G207900 Sobic001G207900 Sobic004G014500--Sobic001G207900 Sobic009G202000--Sobic001G432200 Sobic009G202000--Sobic004G290600 Sobic009G202000--Sobic010G142650 Sobic002G088600 Sobic002G088600 Sobic009G202000--Sobic002G088600 Sobic003G093100 Sobic003G093100 Sobic009G202000--Sobic003G093100 Sobic009G202000--Sobic010G003200 Sobic009G202000--Sobic001G370400 Sobic009G202000--Sobic006G171600 Sobic004G177900 Sobic004G177900 Sobic009G202000--Sobic004G177900
Octagon: transcription factors


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