Gene annotation
Transcriptome id Sobic.006G083201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RCW4
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63100 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os04g35250.1 : MONOCULM 1, putative, expressed
MaizeGDB (Corn) Zm00025a056079 , Zm00025a011367
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
2 Sobic.007G204700 expressed protein -
3 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.001G237900 expansin precursor, putative, expressed -
5 Sobic.008G127933 - -
6 Sobic.001G272700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
8 Sobic.003G007600 expressed protein -
9 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.002G336700 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
11 Sobic.002G017800 expressed protein -
12 Sobic.002G004900 transporter family protein, putative, expressed -
13 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.010G063000 - -
15 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
16 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
17 Sobic.003G299300 expressed protein -
18 Sobic.001G462700 expressed protein -
19 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G083201 Sobic006G083201 Sobic006G158400 Sobic006G158400 Sobic006G083201--Sobic006G158400 Sobic007G204700 Sobic007G204700 Sobic006G083201--Sobic007G204700 Sobic010G158500 Sobic010G158500 Sobic006G083201--Sobic010G158500 Sobic001G237900 Sobic001G237900 Sobic006G083201--Sobic001G237900 Sobic008G127933 Sobic008G127933 Sobic006G083201--Sobic008G127933 Sobic001G272700 Sobic001G272700 Sobic006G083201--Sobic001G272700 Sobic004G202400 Sobic004G202400 Sobic006G083201--Sobic004G202400 Sobic003G007600 Sobic003G007600 Sobic006G083201--Sobic003G007600 Sobic008G027600 Sobic008G027600 Sobic006G083201--Sobic008G027600 Sobic006G158400--Sobic008G127933 Sobic006G158400--Sobic008G027600 Sobic006G158400--Sobic001G237900 Sobic006G158400--Sobic010G158500 Sobic006G158400--Sobic007G204700 Sobic006G158400--Sobic003G007600 Sobic010G043900 Sobic010G043900 Sobic006G158400--Sobic010G043900 Sobic001G318500 Sobic001G318500 Sobic006G158400--Sobic001G318500 Sobic003G299300 Sobic003G299300 Sobic006G158400--Sobic003G299300 Sobic007G204700--Sobic006G158400 Sobic001G462700 Sobic001G462700 Sobic007G204700--Sobic001G462700 Sobic007G204700--Sobic010G158500 Sobic007G204700--Sobic008G127933 Sobic007G204700--Sobic001G237900 Sobic005G215400 Sobic005G215400 Sobic007G204700--Sobic005G215400 Sobic007G204700--Sobic004G202400 Sobic008G128200 Sobic008G128200 Sobic007G204700--Sobic008G128200 Sobic004G348800 Sobic004G348800 Sobic007G204700--Sobic004G348800 Sobic010G158500--Sobic001G237900 Sobic010G158500--Sobic006G158400 Sobic010G158500--Sobic007G204700 Sobic002G124500 Sobic002G124500 Sobic010G158500--Sobic002G124500 SobicK026900 SobicK026900 Sobic010G158500--SobicK026900 Sobic010G063000 Sobic010G063000 Sobic010G158500--Sobic010G063000 Sobic010G158500--Sobic004G202400 Sobic010G158500--Sobic008G127933 Sobic005G066100 Sobic005G066100 Sobic010G158500--Sobic005G066100 Sobic001G238400 Sobic001G238400 Sobic001G237900--Sobic001G238400 Sobic001G237900--Sobic010G158500 Sobic003G053300 Sobic003G053300 Sobic001G237900--Sobic003G053300 Sobic001G237900--Sobic006G158400 Sobic002G425000 Sobic002G425000 Sobic001G237900--Sobic002G425000 Sobic001G237900--Sobic004G202400 Sobic001G304100 Sobic001G304100 Sobic001G237900--Sobic001G304100 Sobic001G237900--Sobic010G063000 Sobic002G213600 Sobic002G213600 Sobic001G237900--Sobic002G213600 Sobic008G127933--Sobic006G158400 Sobic008G127933--Sobic002G425000 Sobic008G127933--Sobic001G237900 Sobic008G127933--Sobic007G204700 Sobic008G128066 Sobic008G128066 Sobic008G127933--Sobic008G128066 Sobic010G270700 Sobic010G270700 Sobic008G127933--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic008G127933--Sobic008G009400 Sobic008G127933--Sobic001G238400 Sobic008G127933--SobicK026900 Sobic001G272700--Sobic004G202400 Sobic008G172600 Sobic008G172600 Sobic001G272700--Sobic008G172600 Sobic003G255500 Sobic003G255500 Sobic001G272700--Sobic003G255500 Sobic004G046200 Sobic004G046200 Sobic001G272700--Sobic004G046200 Sobic001G272700--Sobic010G063000 Sobic006G197100 Sobic006G197100 Sobic001G272700--Sobic006G197100 Sobic003G255200 Sobic003G255200 Sobic001G272700--Sobic003G255200 Sobic001G325400 Sobic001G325400 Sobic001G272700--Sobic001G325400 Sobic004G042000 Sobic004G042000 Sobic001G272700--Sobic004G042000 Sobic004G202400--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic004G202400--Sobic001G416200 Sobic004G202400--Sobic001G237900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G349125 Sobic004G349125 Sobic004G202400--Sobic004G349125 Sobic004G202400--Sobic004G042000 Sobic002G042200 Sobic002G042200 Sobic004G202400--Sobic002G042200 Sobic003G311800 Sobic003G311800 Sobic004G202400--Sobic003G311800 Sobic003G007600--Sobic003G299300 Sobic003G007600--Sobic001G238400 Sobic010G270500 Sobic010G270500 Sobic003G007600--Sobic010G270500 Sobic006G103000 Sobic006G103000 Sobic003G007600--Sobic006G103000 Sobic003G007600--Sobic001G304100 Sobic002G017800 Sobic002G017800 Sobic003G007600--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic003G007600--Sobic009G111000 Sobic003G007600--Sobic001G318500 Sobic001G402200 Sobic001G402200 Sobic003G007600--Sobic001G402200 Sobic008G027600--Sobic006G158400 Sobic002G369400 Sobic002G369400 Sobic008G027600--Sobic002G369400 Sobic008G158100 Sobic008G158100 Sobic008G027600--Sobic008G158100 Sobic008G027600--Sobic010G043900 Sobic008G027600--Sobic001G318500 Sobic001G114900 Sobic001G114900 Sobic008G027600--Sobic001G114900 Sobic008G027600--Sobic003G007600 Sobic009G145500 Sobic009G145500 Sobic008G027600--Sobic009G145500 Sobic002G243000 Sobic002G243000 Sobic008G027600--Sobic002G243000
Octagon: transcription factors


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