Gene annotation
Transcriptome id Sobic.006G112900.1
Synonym Sb06g019460
Functional annotation heavy metal transport/detoxification protein, putative, expressed
UniProt C5YA93
Pfam -
Panther DB PTHR22814 PTHR22814:SF83
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G05030 : Copper transport protein family
RAP-DB (Rice) LOC_Os04g39290.1 : heavy metal transport/detoxification protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G083300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
2 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.003G363600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
4 Sobic.010G267100 zinc finger family protein, putative, expressed -
5 Sobic.010G019600 cytochrome P450 86A1, putative, expressed -
6 Sobic.010G229300 expressed protein -
7 Sobic.008G076700 protein kinase, putative, expressed -
8 Sobic.002G185400 transporter-related, putative, expressed -
9 Sobic.K044402 - -
10 Sobic.002G356500 expressed protein -
11 Sobic.010G170150 - -
12 Sobic.007G151700 plant viral response family protein, putative, expressed -
13 Sobic.003G414900 DUF567 domain containing protein, putative, expressed -
14 Sobic.006G009800 - -
15 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
16 Sobic.007G108700 expressed protein -
17 Sobic.004G041600 homeobox associated leucine zipper, putative, expressed -
18 Sobic.010G192700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
19 Sobic.005G227900 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
20 Sobic.004G188100 expressed protein -


Gene co-expression network
sample Sobic006G112900 Sobic006G112900 Sobic010G083300 Sobic010G083300 Sobic006G112900--Sobic010G083300 Sobic001G075300 Sobic001G075300 Sobic006G112900--Sobic001G075300 Sobic003G363600 Sobic003G363600 Sobic006G112900--Sobic003G363600 Sobic010G267100 Sobic010G267100 Sobic006G112900--Sobic010G267100 Sobic010G019600 Sobic010G019600 Sobic006G112900--Sobic010G019600 Sobic010G229300 Sobic010G229300 Sobic006G112900--Sobic010G229300 Sobic008G076700 Sobic008G076700 Sobic006G112900--Sobic008G076700 Sobic002G185400 Sobic002G185400 Sobic006G112900--Sobic002G185400 SobicK044402 SobicK044402 Sobic006G112900--SobicK044402 Sobic010G083300--Sobic001G075300 Sobic010G083300--Sobic002G185400 Sobic005G196700 Sobic005G196700 Sobic010G083300--Sobic005G196700 Sobic007G115600 Sobic007G115600 Sobic010G083300--Sobic007G115600 Sobic006G223850 Sobic006G223850 Sobic010G083300--Sobic006G223850 Sobic004G163400 Sobic004G163400 Sobic010G083300--Sobic004G163400 Sobic007G077600 Sobic007G077600 Sobic010G083300--Sobic007G077600 Sobic010G083050 Sobic010G083050 Sobic010G083300--Sobic010G083050 Sobic003G331900 Sobic003G331900 Sobic010G083300--Sobic003G331900 Sobic010G170150 Sobic010G170150 Sobic001G075300--Sobic010G170150 Sobic009G150600 Sobic009G150600 Sobic001G075300--Sobic009G150600 Sobic001G075300--Sobic008G076700 Sobic001G428600 Sobic001G428600 Sobic001G075300--Sobic001G428600 Sobic007G108700 Sobic007G108700 Sobic001G075300--Sobic007G108700 Sobic010G082100 Sobic010G082100 Sobic001G075300--Sobic010G082100 Sobic001G075300--Sobic010G083300 Sobic001G075300--Sobic002G185400 Sobic004G212600 Sobic004G212600 Sobic001G075300--Sobic004G212600 Sobic004G202900 Sobic004G202900 Sobic003G363600--Sobic004G202900 Sobic003G363600--SobicK044402 Sobic005G227900 Sobic005G227900 Sobic003G363600--Sobic005G227900 Sobic004G317401 Sobic004G317401 Sobic003G363600--Sobic004G317401 Sobic002G373700 Sobic002G373700 Sobic003G363600--Sobic002G373700 Sobic007G191400 Sobic007G191400 Sobic003G363600--Sobic007G191400 Sobic003G363600--Sobic010G019600 Sobic002G085200 Sobic002G085200 Sobic003G363600--Sobic002G085200 Sobic004G341600 Sobic004G341600 Sobic003G363600--Sobic004G341600 Sobic001G432700 Sobic001G432700 Sobic010G267100--Sobic001G432700 Sobic004G302200 Sobic004G302200 Sobic010G267100--Sobic004G302200 Sobic003G360200 Sobic003G360200 Sobic010G267100--Sobic003G360200 Sobic010G192900 Sobic010G192900 Sobic010G267100--Sobic010G192900 Sobic010G267100--Sobic007G108700 Sobic002G356500 Sobic002G356500 Sobic010G267100--Sobic002G356500 Sobic003G125500 Sobic003G125500 Sobic010G267100--Sobic003G125500 Sobic006G009000 Sobic006G009000 Sobic010G267100--Sobic006G009000 Sobic003G024900 Sobic003G024900 Sobic010G267100--Sobic003G024900 Sobic002G334200 Sobic002G334200 Sobic010G019600--Sobic002G334200 Sobic004G188100 Sobic004G188100 Sobic010G019600--Sobic004G188100 Sobic010G019600--Sobic010G082100 Sobic010G019600--Sobic004G317401 Sobic001G506500 Sobic001G506500 Sobic010G019600--Sobic001G506500 Sobic003G390500 Sobic003G390500 Sobic010G019600--Sobic003G390500 Sobic002G334100 Sobic002G334100 Sobic010G019600--Sobic002G334100 Sobic001G070100 Sobic001G070100 Sobic010G019600--Sobic001G070100 Sobic010G019600--Sobic003G363600 Sobic003G186066 Sobic003G186066 Sobic010G229300--Sobic003G186066 Sobic010G192700 Sobic010G192700 Sobic010G229300--Sobic010G192700 Sobic003G120900 Sobic003G120900 Sobic010G229300--Sobic003G120900 Sobic005G021400 Sobic005G021400 Sobic010G229300--Sobic005G021400 Sobic003G396050 Sobic003G396050 Sobic010G229300--Sobic003G396050 Sobic005G005300 Sobic005G005300 Sobic010G229300--Sobic005G005300 Sobic003G123950 Sobic003G123950 Sobic010G229300--Sobic003G123950 Sobic001G293200 Sobic001G293200 Sobic010G229300--Sobic001G293200 Sobic008G106100 Sobic008G106100 Sobic010G229300--Sobic008G106100 Sobic008G076700--Sobic010G170150 Sobic008G076700--Sobic001G075300 Sobic004G029300 Sobic004G029300 Sobic008G076700--Sobic004G029300 Sobic008G076700--Sobic009G150600 Sobic008G076700--Sobic002G334200 Sobic008G076700--Sobic010G082100 Sobic001G396700 Sobic001G396700 Sobic008G076700--Sobic001G396700 Sobic007G021800 Sobic007G021800 Sobic008G076700--Sobic007G021800 Sobic001G349200 Sobic001G349200 Sobic008G076700--Sobic001G349200 Sobic001G084200 Sobic001G084200 Sobic002G185400--Sobic001G084200 Sobic001G001132 Sobic001G001132 Sobic002G185400--Sobic001G001132 Sobic009G168700 Sobic009G168700 Sobic002G185400--Sobic009G168700 Sobic006G138966 Sobic006G138966 Sobic002G185400--Sobic006G138966 Sobic005G073101 Sobic005G073101 Sobic002G185400--Sobic005G073101 Sobic001G192750 Sobic001G192750 Sobic002G185400--Sobic001G192750 Sobic004G067850 Sobic004G067850 Sobic002G185400--Sobic004G067850 Sobic008G032850 Sobic008G032850 Sobic002G185400--Sobic008G032850 Sobic002G342200 Sobic002G342200 Sobic002G185400--Sobic002G342200 Sobic007G055400 Sobic007G055400 SobicK044402--Sobic007G055400 Sobic009G227650 Sobic009G227650 SobicK044402--Sobic009G227650 SobicK044402--Sobic005G227900 Sobic010G158601 Sobic010G158601 SobicK044402--Sobic010G158601 Sobic008G085600 Sobic008G085600 SobicK044402--Sobic008G085600 SobicK044402--Sobic002G185400 SobicK044402--Sobic003G363600 Sobic010G262650 Sobic010G262650 SobicK044402--Sobic010G262650 SobicK044402--Sobic004G067850
Octagon: transcription factors


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