Gene annotation
Transcriptome id Sobic.006G175500.3
Synonym GL3, Sb06g025040, MYC6.2
Functional annotation anthocyanin regulatory Lc protein, putative, expressed
UniProt A0A1Z5REW9 , Q6JAH5
Pfam PF14215 PF00010
Panther DB PTHR11514 PTHR11514:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63650 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g47080.1 : anthocyanin regulatory Lc protein, putative, expressed
MaizeGDB (Corn) Zm00025a010250 , Zm00025a056836
Brachypodium -
Barley -
Wheat TraesCS2B02G428000 , TraesCS4B02G397400 , TraesCS4B02G397400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G136700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.001G460000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.004G295700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
4 Sobic.003G376800 nitroreductase family protein, putative, expressed -
5 Sobic.005G110487 - -
6 Sobic.003G423900 GRAS family transcription factor containing protein(PubMedID : 24906815)@GRAS family transcription factor containing protein, expressed -
7 Sobic.004G170032 - -
8 Sobic.002G110100 cytochrome P450 71E1, putative, expressed -
9 Sobic.008G041450 - -
10 Sobic.006G034650 - -
11 Sobic.010G220400 -(PubMedID : 23108465)@OsFBX202 - F-box domain containing protein, expressed -
12 Sobic.003G349100 plant-specific domain TIGR01589 family protein, expressed -
13 Sobic.002G226700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K14499: BRI1 kinase inhibitor 1
14 Sobic.003G385000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein kinase, putative, expressed -
15 Sobic.007G217300 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
16 Sobic.003G223800 transmembrane amino acid transporter protein, putative, expressed -
17 Sobic.002G148700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heavy metal transport/detoxification protein, putative, expressed -
18 Sobic.008G029300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
19 Sobic.010G092600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
20 Sobic.001G284425 - -


Gene co-expression network
sample Sobic006G175500 Sobic006G175500 Sobic009G136700 Sobic009G136700 Sobic006G175500--Sobic009G136700 Sobic001G460000 Sobic001G460000 Sobic006G175500--Sobic001G460000 Sobic004G295700 Sobic004G295700 Sobic006G175500--Sobic004G295700 Sobic003G376800 Sobic003G376800 Sobic006G175500--Sobic003G376800 Sobic005G110487 Sobic005G110487 Sobic006G175500--Sobic005G110487 Sobic003G423900 Sobic003G423900 Sobic006G175500--Sobic003G423900 Sobic004G170032 Sobic004G170032 Sobic006G175500--Sobic004G170032 Sobic002G110100 Sobic002G110100 Sobic006G175500--Sobic002G110100 Sobic008G041450 Sobic008G041450 Sobic006G175500--Sobic008G041450 Sobic003G131800 Sobic003G131800 Sobic009G136700--Sobic003G131800 Sobic002G075800 Sobic002G075800 Sobic009G136700--Sobic002G075800 Sobic009G136500 Sobic009G136500 Sobic009G136700--Sobic009G136500 Sobic002G278800 Sobic002G278800 Sobic009G136700--Sobic002G278800 Sobic002G278700 Sobic002G278700 Sobic009G136700--Sobic002G278700 Sobic003G173700 Sobic003G173700 Sobic009G136700--Sobic003G173700 Sobic007G195300 Sobic007G195300 Sobic009G136700--Sobic007G195300 Sobic010G012400 Sobic010G012400 Sobic009G136700--Sobic010G012400 Sobic001G332966 Sobic001G332966 Sobic009G136700--Sobic001G332966 Sobic007G050600 Sobic007G050600 Sobic001G460000--Sobic007G050600 Sobic002G118700 Sobic002G118700 Sobic001G460000--Sobic002G118700 Sobic009G063400 Sobic009G063400 Sobic001G460000--Sobic009G063400 Sobic001G460000--Sobic004G295700 Sobic002G075500 Sobic002G075500 Sobic001G460000--Sobic002G075500 Sobic001G334900 Sobic001G334900 Sobic001G460000--Sobic001G334900 Sobic002G321400 Sobic002G321400 Sobic001G460000--Sobic002G321400 Sobic004G296200 Sobic004G296200 Sobic001G460000--Sobic004G296200 Sobic004G265600 Sobic004G265600 Sobic001G460000--Sobic004G265600 Sobic004G295700--Sobic007G050600 Sobic004G295700--Sobic001G460000 Sobic007G180900 Sobic007G180900 Sobic004G295700--Sobic007G180900 Sobic004G295700--Sobic009G136700 Sobic004G295700--Sobic002G118700 Sobic003G362300 Sobic003G362300 Sobic004G295700--Sobic003G362300 Sobic004G295700--Sobic004G296200 Sobic004G295700--Sobic002G110100 Sobic007G130800 Sobic007G130800 Sobic004G295700--Sobic007G130800 Sobic010G220400 Sobic010G220400 Sobic003G376800--Sobic010G220400 Sobic003G078501 Sobic003G078501 Sobic003G376800--Sobic003G078501 Sobic006G034650 Sobic006G034650 Sobic003G376800--Sobic006G034650 Sobic001G125100 Sobic001G125100 Sobic003G376800--Sobic001G125100 Sobic007G006000 Sobic007G006000 Sobic003G376800--Sobic007G006000 Sobic009G000700 Sobic009G000700 Sobic003G376800--Sobic009G000700 Sobic007G217300 Sobic007G217300 Sobic003G376800--Sobic007G217300 Sobic004G257350 Sobic004G257350 Sobic003G376800--Sobic004G257350 Sobic003G376800--Sobic005G110487 Sobic005G110487--Sobic006G034650 Sobic007G101000 Sobic007G101000 Sobic005G110487--Sobic007G101000 Sobic004G045800 Sobic004G045800 Sobic005G110487--Sobic004G045800 Sobic002G342100 Sobic002G342100 Sobic005G110487--Sobic002G342100 Sobic009G128300 Sobic009G128300 Sobic005G110487--Sobic009G128300 Sobic006G069200 Sobic006G069200 Sobic005G110487--Sobic006G069200 Sobic002G182800 Sobic002G182800 Sobic005G110487--Sobic002G182800 Sobic003G083000 Sobic003G083000 Sobic005G110487--Sobic003G083000 Sobic001G509400 Sobic001G509400 Sobic005G110487--Sobic001G509400 Sobic003G423900--Sobic009G000700 Sobic001G286000 Sobic001G286000 Sobic003G423900--Sobic001G286000 Sobic004G310600 Sobic004G310600 Sobic003G423900--Sobic004G310600 Sobic003G423900--Sobic007G217300 Sobic003G423900--Sobic010G220400 Sobic003G423900--Sobic003G078501 Sobic004G155150 Sobic004G155150 Sobic003G423900--Sobic004G155150 Sobic003G423900--Sobic001G125100 Sobic001G159850 Sobic001G159850 Sobic003G423900--Sobic001G159850 Sobic002G110200 Sobic002G110200 Sobic004G170032--Sobic002G110200 Sobic004G170032--Sobic002G182800 Sobic004G170032--Sobic009G128300 Sobic002G331450 Sobic002G331450 Sobic004G170032--Sobic002G331450 Sobic001G075101 Sobic001G075101 Sobic004G170032--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic004G170032--Sobic007G169600 Sobic003G198150 Sobic003G198150 Sobic004G170032--Sobic003G198150 Sobic004G170032--Sobic001G509400 Sobic003G227600 Sobic003G227600 Sobic004G170032--Sobic003G227600 Sobic002G226700 Sobic002G226700 Sobic002G110100--Sobic002G226700 Sobic010G166700 Sobic010G166700 Sobic002G110100--Sobic010G166700 Sobic002G173800 Sobic002G173800 Sobic002G110100--Sobic002G173800 Sobic002G110100--Sobic009G136700 Sobic002G110100--Sobic004G296200 Sobic005G141000 Sobic005G141000 Sobic002G110100--Sobic005G141000 Sobic002G110100--Sobic004G295700 Sobic002G110100--Sobic002G075800 Sobic002G110100--Sobic007G050600 Sobic004G098800 Sobic004G098800 Sobic008G041450--Sobic004G098800 Sobic008G041600 Sobic008G041600 Sobic008G041450--Sobic008G041600 Sobic003G141600 Sobic003G141600 Sobic008G041450--Sobic003G141600 Sobic010G134700 Sobic010G134700 Sobic008G041450--Sobic010G134700 Sobic003G392275 Sobic003G392275 Sobic008G041450--Sobic003G392275 Sobic003G385000 Sobic003G385000 Sobic008G041450--Sobic003G385000 Sobic010G006800 Sobic010G006800 Sobic008G041450--Sobic010G006800 Sobic002G102300 Sobic002G102300 Sobic008G041450--Sobic002G102300 Sobic001G414100 Sobic001G414100 Sobic008G041450--Sobic001G414100
Octagon: transcription factors


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