Gene annotation
Transcriptome id Sobic.006G189400.1
Synonym Sb06g026290
Functional annotation expressed protein
UniProt A0A1B6PMU6
Pfam PF06697
Panther DB PTHR33512 PTHR33512:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22900 : Protein of unknown function (DUF1191)
RAP-DB (Rice) LOC_Os04g49140.1 : expressed protein
MaizeGDB (Corn) Zm00025a010082
Brachypodium PNT61702
Barley HORVU2Hr1G093980.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G231400 cyclin, putative, expressed K18813: cyclin D7, plant
2 Sobic.008G187400 - -
3 Sobic.001G488400 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659850)@bHLH family protein, putative, expressed -
4 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
6 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
8 Sobic.007G012800 Leucine Rich Repeat family protein, expressed -
9 Sobic.003G300400 expressed protein -
10 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
11 Sobic.005G098400 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
12 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
13 Sobic.004G168600 heat shock protein-related, putative, expressed -
14 Sobic.003G339600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
15 Sobic.009G037300 transferase family protein, putative, expressed -
16 Sobic.007G189400 BEE 1, putative, expressed -
17 Sobic.007G094200 expressed protein -
18 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
19 Sobic.005G188500 expressed protein -
20 Sobic.003G418300 protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1


Gene co-expression network
sample Sobic006G189400 Sobic006G189400 Sobic005G231400 Sobic005G231400 Sobic006G189400--Sobic005G231400 Sobic008G187400 Sobic008G187400 Sobic006G189400--Sobic008G187400 Sobic001G488400 Sobic001G488400 Sobic006G189400--Sobic001G488400 Sobic003G116100 Sobic003G116100 Sobic006G189400--Sobic003G116100 Sobic003G338200 Sobic003G338200 Sobic006G189400--Sobic003G338200 Sobic002G419200 Sobic002G419200 Sobic006G189400--Sobic002G419200 Sobic001G345200 Sobic001G345200 Sobic006G189400--Sobic001G345200 Sobic007G012800 Sobic007G012800 Sobic006G189400--Sobic007G012800 Sobic003G300400 Sobic003G300400 Sobic006G189400--Sobic003G300400 Sobic005G231400--Sobic008G187400 Sobic005G231400--Sobic006G189400 Sobic005G231400--Sobic001G345200 Sobic008G170400 Sobic008G170400 Sobic005G231400--Sobic008G170400 Sobic005G098400 Sobic005G098400 Sobic005G231400--Sobic005G098400 Sobic005G231400--Sobic001G488400 Sobic003G418300 Sobic003G418300 Sobic005G231400--Sobic003G418300 Sobic005G231400--Sobic003G338200 Sobic007G094200 Sobic007G094200 Sobic005G231400--Sobic007G094200 Sobic008G187400--Sobic007G094200 Sobic001G438500 Sobic001G438500 Sobic008G187400--Sobic001G438500 Sobic009G254500 Sobic009G254500 Sobic008G187400--Sobic009G254500 Sobic008G187400--Sobic001G488400 Sobic002G011000 Sobic002G011000 Sobic008G187400--Sobic002G011000 Sobic008G187400--Sobic005G231400 Sobic008G187400--Sobic003G300400 Sobic002G032500 Sobic002G032500 Sobic008G187400--Sobic002G032500 Sobic003G309400 Sobic003G309400 Sobic008G187400--Sobic003G309400 Sobic005G188500 Sobic005G188500 Sobic001G488400--Sobic005G188500 Sobic010G027700 Sobic010G027700 Sobic001G488400--Sobic010G027700 Sobic006G044200 Sobic006G044200 Sobic001G488400--Sobic006G044200 Sobic001G488400--Sobic008G187400 Sobic001G488400--Sobic001G438500 Sobic001G488400--Sobic003G116100 Sobic007G189400 Sobic007G189400 Sobic001G488400--Sobic007G189400 Sobic002G068400 Sobic002G068400 Sobic001G488400--Sobic002G068400 Sobic008G035400 Sobic008G035400 Sobic001G488400--Sobic008G035400 Sobic003G116100--Sobic002G419200 Sobic003G116100--Sobic007G094200 Sobic003G116100--Sobic003G338200 Sobic006G219100 Sobic006G219100 Sobic003G116100--Sobic006G219100 Sobic003G116100--Sobic006G044200 Sobic003G116100--Sobic001G488400 Sobic003G277200 Sobic003G277200 Sobic003G116100--Sobic003G277200 Sobic003G116100--Sobic003G300400 Sobic003G116100--Sobic008G187400 Sobic003G338200--Sobic002G032500 Sobic003G338200--Sobic002G419200 Sobic003G338200--Sobic003G309400 Sobic004G248100 Sobic004G248100 Sobic003G338200--Sobic004G248100 Sobic003G338200--Sobic001G345200 Sobic003G338200--Sobic003G116100 Sobic003G338200--Sobic007G094200 Sobic003G338200--Sobic003G277200 Sobic003G338200--Sobic003G300400 Sobic002G419200--Sobic003G300400 Sobic002G419200--Sobic003G338200 Sobic002G419200--Sobic003G116100 Sobic002G419200--Sobic003G309400 Sobic002G419200--Sobic003G277200 Sobic001G285200 Sobic001G285200 Sobic002G419200--Sobic001G285200 Sobic002G419200--Sobic002G032500 Sobic002G419200--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic002G419200--Sobic003G339600 Sobic001G345200--Sobic005G098400 Sobic001G345200--Sobic003G338200 Sobic002G016400 Sobic002G016400 Sobic001G345200--Sobic002G016400 Sobic001G267100 Sobic001G267100 Sobic001G345200--Sobic001G267100 Sobic001G345200--Sobic003G116100 Sobic005G091000 Sobic005G091000 Sobic001G345200--Sobic005G091000 Sobic001G305300 Sobic001G305300 Sobic001G345200--Sobic001G305300 Sobic001G345200--Sobic008G187400 Sobic001G345200--Sobic003G277200 Sobic005G209900 Sobic005G209900 Sobic007G012800--Sobic005G209900 Sobic007G012800--Sobic001G488400 Sobic009G154100 Sobic009G154100 Sobic007G012800--Sobic009G154100 Sobic009G134000 Sobic009G134000 Sobic007G012800--Sobic009G134000 Sobic007G012800--Sobic005G188500 Sobic010G107200 Sobic010G107200 Sobic007G012800--Sobic010G107200 Sobic007G103800 Sobic007G103800 Sobic007G012800--Sobic007G103800 Sobic006G032800 Sobic006G032800 Sobic007G012800--Sobic006G032800 Sobic007G012800--Sobic003G277200 Sobic003G300400--Sobic003G309400 Sobic003G300400--Sobic002G032500 Sobic003G300400--Sobic002G419200 Sobic003G300400--Sobic009G254500 Sobic003G300400--Sobic007G094200 Sobic003G300400--Sobic003G339600 Sobic002G229700 Sobic002G229700 Sobic003G300400--Sobic002G229700 Sobic008G154700 Sobic008G154700 Sobic003G300400--Sobic008G154700 Sobic009G141300 Sobic009G141300 Sobic003G300400--Sobic009G141300
Octagon: transcription factors


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