Gene annotation
Transcriptome id Sobic.006G226900.1,Sobic.006G226900.3,Sobic.006G226900.2
Synonym Sb06g029560, BAN
Functional annotation leucoanthocyanidin reductase, putative, expressed
UniProt C5YGL8 , A0A1B6PNE1
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF288
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology K08695; anthocyanidin reductase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT1G61720 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os04g53810.1,LOC_Os04g53850.1 : leucoanthocyanidin reductase, putative, expressed
MaizeGDB (Corn) Zm00025a057102
Brachypodium KQJ84785
Barley HORVU2Hr1G108180.2 , HORVU2Hr1G108180.3 , HORVU2Hr1G108180.1 , HORVU2Hr1G108180.4 , HORVU2Hr1G108180.5 , HORVU2Hr1G108110.12 , HORVU2Hr1G123890.5 , HORVU2Hr1G123890.3 , HORVU2Hr1G123890.1
Wheat TraesCS2D02G481600 , TraesCS2D02G481600 , TraesCS2B02G507500 , TraesCS2B02G507700 , TraesCS2B02G507700 , TraesCS2A02G483100 , TraesCS2A02G481400 , TraesCS2B02G507600 , TraesCS2D02G481500 , TraesCS2D02G481700 , TraesCS2A02G481200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G192700 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.004G193200 tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
3 Sobic.003G008100 U-box domain containing protein, expressed -
4 Sobic.010G266000 uncharacterized protein(PubMedID : 28640841)@expressed protein -
5 Sobic.002G227800 gibberellin receptor, putative, expressed -
6 Sobic.009G237300 - -
7 Sobic.002G277900 ki1 protein, putative, expressed -
8 Sobic.001G158966 - -
9 Sobic.001G370100 R3H domain containing protein, expressed -
10 Sobic.001G177500 - -
11 Sobic.002G128750 - -
12 Sobic.007G119400 expressed protein -
13 Sobic.007G129900 expressed protein -
14 Sobic.010G103300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane attack complex component/perforin/complement C9, putative, expressed -
15 Sobic.005G186600 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed -
16 Sobic.003G318650 - -
17 Sobic.008G097000 oxidoreductase, aldo/keto reductase family protein, putative, expressed K17744: L-galactose dehydrogenase
18 Sobic.003G064150 - -
19 Sobic.005G114000 potassium channel protein, putative, expressed -
20 Sobic.010G140800 - -


Gene co-expression network
sample Sobic006G226900 Sobic006G226900 Sobic002G192700 Sobic002G192700 Sobic006G226900--Sobic002G192700 Sobic004G193200 Sobic004G193200 Sobic006G226900--Sobic004G193200 Sobic003G008100 Sobic003G008100 Sobic006G226900--Sobic003G008100 Sobic010G266000 Sobic010G266000 Sobic006G226900--Sobic010G266000 Sobic002G227800 Sobic002G227800 Sobic006G226900--Sobic002G227800 Sobic009G237300 Sobic009G237300 Sobic006G226900--Sobic009G237300 Sobic002G277900 Sobic002G277900 Sobic006G226900--Sobic002G277900 Sobic001G158966 Sobic001G158966 Sobic006G226900--Sobic001G158966 Sobic001G370100 Sobic001G370100 Sobic006G226900--Sobic001G370100 Sobic003G064150 Sobic003G064150 Sobic002G192700--Sobic003G064150 Sobic008G097000 Sobic008G097000 Sobic002G192700--Sobic008G097000 Sobic002G192700--Sobic002G277900 Sobic002G192700--Sobic003G008100 Sobic002G192700--Sobic010G266000 Sobic005G050900 Sobic005G050900 Sobic002G192700--Sobic005G050900 Sobic001G489225 Sobic001G489225 Sobic002G192700--Sobic001G489225 Sobic002G192700--Sobic004G193200 Sobic002G192700--Sobic001G158966 Sobic002G128750 Sobic002G128750 Sobic004G193200--Sobic002G128750 Sobic004G193200--Sobic002G192700 Sobic004G193200--Sobic001G370100 Sobic001G177500 Sobic001G177500 Sobic004G193200--Sobic001G177500 Sobic004G193200--Sobic009G237300 Sobic004G193200--Sobic010G266000 Sobic004G193200--Sobic003G064150 Sobic002G289701 Sobic002G289701 Sobic004G193200--Sobic002G289701 Sobic004G193200--Sobic001G489225 Sobic003G008100--Sobic002G277900 Sobic003G008100--Sobic010G266000 Sobic001G033701 Sobic001G033701 Sobic003G008100--Sobic001G033701 Sobic004G184900 Sobic004G184900 Sobic003G008100--Sobic004G184900 Sobic004G122700 Sobic004G122700 Sobic003G008100--Sobic004G122700 Sobic010G103300 Sobic010G103300 Sobic003G008100--Sobic010G103300 Sobic008G008701 Sobic008G008701 Sobic003G008100--Sobic008G008701 Sobic004G090900 Sobic004G090900 Sobic003G008100--Sobic004G090900 Sobic002G046500 Sobic002G046500 Sobic003G008100--Sobic002G046500 Sobic010G273200 Sobic010G273200 Sobic010G266000--Sobic010G273200 Sobic001G152240 Sobic001G152240 Sobic010G266000--Sobic001G152240 Sobic002G103400 Sobic002G103400 Sobic010G266000--Sobic002G103400 Sobic010G091750 Sobic010G091750 Sobic010G266000--Sobic010G091750 Sobic010G266000--Sobic010G103300 Sobic003G060900 Sobic003G060900 Sobic010G266000--Sobic003G060900 Sobic005G144101 Sobic005G144101 Sobic010G266000--Sobic005G144101 Sobic007G087500 Sobic007G087500 Sobic010G266000--Sobic007G087500 Sobic008G053700 Sobic008G053700 Sobic010G266000--Sobic008G053700 Sobic010G146350 Sobic010G146350 Sobic002G227800--Sobic010G146350 Sobic005G207600 Sobic005G207600 Sobic002G227800--Sobic005G207600 Sobic007G120600 Sobic007G120600 Sobic002G227800--Sobic007G120600 Sobic010G228200 Sobic010G228200 Sobic002G227800--Sobic010G228200 Sobic001G060001 Sobic001G060001 Sobic002G227800--Sobic001G060001 Sobic004G052700 Sobic004G052700 Sobic002G227800--Sobic004G052700 Sobic008G096401 Sobic008G096401 Sobic002G227800--Sobic008G096401 Sobic003G023100 Sobic003G023100 Sobic002G227800--Sobic003G023100 Sobic001G190600 Sobic001G190600 Sobic002G227800--Sobic001G190600 Sobic009G125700 Sobic009G125700 Sobic009G237300--Sobic009G125700 Sobic001G234700 Sobic001G234700 Sobic009G237300--Sobic001G234700 Sobic002G277900--Sobic003G008100 Sobic005G190700 Sobic005G190700 Sobic002G277900--Sobic005G190700 Sobic005G029866 Sobic005G029866 Sobic002G277900--Sobic005G029866 Sobic001G200400 Sobic001G200400 Sobic002G277900--Sobic001G200400 Sobic008G045100 Sobic008G045100 Sobic002G277900--Sobic008G045100 Sobic002G277900--Sobic009G125700 Sobic003G083100 Sobic003G083100 Sobic002G277900--Sobic003G083100 Sobic002G277900--Sobic010G266000 Sobic002G277900--Sobic004G184900 Sobic003G190701 Sobic003G190701 Sobic001G158966--Sobic003G190701 Sobic001G158966--Sobic009G125700 Sobic001G158966--Sobic001G234700 Sobic001G370100--Sobic001G177500 Sobic004G327100 Sobic004G327100 Sobic001G370100--Sobic004G327100 Sobic007G027400 Sobic007G027400 Sobic001G370100--Sobic007G027400 Sobic001G045300 Sobic001G045300 Sobic001G370100--Sobic001G045300 Sobic001G358101 Sobic001G358101 Sobic001G370100--Sobic001G358101 Sobic001G370100--Sobic002G046500 Sobic001G370100--Sobic003G190701 Sobic010G140800 Sobic010G140800 Sobic001G370100--Sobic010G140800 Sobic004G162800 Sobic004G162800 Sobic001G370100--Sobic004G162800
Octagon: transcription factors


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