Gene annotation
Transcriptome id Sobic.006G229800.1
Synonym RK3, Sb06g029770, ARK3
Functional annotation receptor-like kinase, putative, expressed
UniProt A0A1B6PNF5
Pfam PF08276 PF00954 PF01453 PF07714
Panther DB PTHR27002 PTHR27002:SF87
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os04g54070.1 : receptor-like kinase, putative, expressed
MaizeGDB (Corn) Zm00025a009644 , Zm00025a009642 , Zm00025a057135 , Zm00025a057121
Brachypodium PNT61928 , PNT61926 , PNT61937 , PNT61934 , PNT65692 , KQJ92830 , KQJ92829 , PNT76078
Barley HORVU2Hr1G117360.5 , HORVU5Hr1G123550.3 , HORVU5Hr1G123550.2 , HORVU5Hr1G123550.5 , HORVU5Hr1G123550.4 , HORVU5Hr1G123550.7 , HORVU5Hr1G123550.6 , HORVU5Hr1G123550.8 , HORVU2Hr1G117360.27 , HORVU2Hr1G117360.21 , HORVU2Hr1G117360.20 , HORVU2Hr1G117360.23 , HORVU2Hr1G117360.22 , HORVU5Hr1G123550.1 , HORVU3Hr1G006620.13 , HORVU3Hr1G006620.12 , HORVU3Hr1G006620.11 , HORVU3Hr1G006620.10 , HORVU3Hr1G006620.15 , HORVU3Hr1G006620.14 , HORVU2Hr1G117360.29 , HORVU2Hr1G108530.4 , HORVU2Hr1G108530.3 , HORVU2Hr1G108530.2 , HORVU2Hr1G108530.1 , HORVU3Hr1G006620.9 , HORVU3Hr1G006620.8 , HORVU3Hr1G006620.3 , HORVU3Hr1G006620.2 , HORVU3Hr1G006620.7 , HORVU3Hr1G006620.6 , HORVU3Hr1G006620.5 , HORVU3Hr1G006620.4 , HORVU2Hr1G117360.10 , HORVU2Hr1G117360.11 , HORVU2Hr1G117360.14 , HORVU2Hr1G117360.15 , HORVU2Hr1G117360.16 , HORVU2Hr1G117360.17 , HORVU2Hr1G117360.19
Wheat TraesCSU02G010800 , TraesCS2D02G534400 , TraesCS2B02G511700 , TraesCS2B02G511300 , TraesCS2B02G512300 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2D02G538400 , TraesCS2D02G485400 , TraesCS2D02G485400 , TraesCS2B02G512400 , TraesCS3B02G044200 , TraesCS2B02G513600 , TraesCS2B02G512200 , TraesCS2B02G565300 , TraesCS2D02G484700 , TraesCS2D02G484700 , TraesCS2D02G484700 , TraesCS3A02G039300 , TraesCSU02G011500 , TraesCS2D02G485300 , TraesCS2A02G485700 , TraesCS2A02G485700 , TraesCSU02G081800 , TraesCS2D02G537100 , TraesCS2D02G536900 , TraesCS2D02G536900 , TraesCS2D02G536900 , TraesCS3A02G039200 , TraesCS2D02G003900 , TraesCS2D02G485200 , TraesCS2D02G485200 , TraesCS3D02G040600 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS3D02G040700 , TraesCS2A02G485100 , TraesCS2B02G567700 , TraesCS2B02G511600
Populus PNT11650 , PNT11629 , PNT11621 , PNT11639 , PNT11633 , PNT11631 , PNT11630 , PNT11634 , PNT11665 , PNT11667 , PNT11662 , PNT11663


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G175500 acetyltransferase, GNAT family, putative, expressed -
2 Sobic.001G005200 expressed protein -
3 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
5 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
6 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
7 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
8 Sobic.007G103400 expressed protein -
9 Sobic.010G035400 expressed protein -
10 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
11 Sobic.006G280800 expressed protein -
12 Sobic.006G197300 expressed protein -
13 Sobic.006G114900 - -
14 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
15 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3
16 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
17 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
18 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
19 Sobic.004G333400 COBW domain containing protein, putative, expressed -
20 Sobic.003G233700 SET domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G229800 Sobic006G229800 Sobic009G175500 Sobic009G175500 Sobic006G229800--Sobic009G175500 Sobic001G005200 Sobic001G005200 Sobic006G229800--Sobic001G005200 Sobic003G160800 Sobic003G160800 Sobic006G229800--Sobic003G160800 Sobic001G003200 Sobic001G003200 Sobic006G229800--Sobic001G003200 Sobic001G128600 Sobic001G128600 Sobic006G229800--Sobic001G128600 Sobic009G237000 Sobic009G237000 Sobic006G229800--Sobic009G237000 Sobic003G387100 Sobic003G387100 Sobic006G229800--Sobic003G387100 Sobic007G103400 Sobic007G103400 Sobic006G229800--Sobic007G103400 Sobic010G035400 Sobic010G035400 Sobic006G229800--Sobic010G035400 Sobic009G175500--Sobic001G005200 Sobic004G336200 Sobic004G336200 Sobic009G175500--Sobic004G336200 Sobic009G175500--Sobic001G128600 Sobic009G175500--Sobic003G160800 Sobic009G175500--Sobic003G387100 Sobic001G500600 Sobic001G500600 Sobic009G175500--Sobic001G500600 Sobic001G283700 Sobic001G283700 Sobic009G175500--Sobic001G283700 Sobic001G126300 Sobic001G126300 Sobic009G175500--Sobic001G126300 Sobic009G175500--Sobic010G035400 Sobic003G378600 Sobic003G378600 Sobic001G005200--Sobic003G378600 Sobic001G005200--Sobic001G128600 Sobic008G102000 Sobic008G102000 Sobic001G005200--Sobic008G102000 Sobic009G140600 Sobic009G140600 Sobic001G005200--Sobic009G140600 Sobic001G005200--Sobic009G175500 Sobic010G245200 Sobic010G245200 Sobic001G005200--Sobic010G245200 Sobic002G233700 Sobic002G233700 Sobic001G005200--Sobic002G233700 Sobic001G005200--Sobic003G387100 Sobic001G122300 Sobic001G122300 Sobic001G005200--Sobic001G122300 Sobic003G160800--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic003G160800--Sobic005G100300 Sobic003G160800--Sobic010G035400 Sobic003G160800--Sobic003G387100 Sobic003G160800--Sobic007G103400 Sobic002G112400 Sobic002G112400 Sobic003G160800--Sobic002G112400 Sobic003G233700 Sobic003G233700 Sobic003G160800--Sobic003G233700 Sobic001G134700 Sobic001G134700 Sobic003G160800--Sobic001G134700 Sobic003G160800--Sobic009G175500 Sobic009G056700 Sobic009G056700 Sobic001G003200--Sobic009G056700 Sobic007G053800 Sobic007G053800 Sobic001G003200--Sobic007G053800 Sobic004G121400 Sobic004G121400 Sobic001G003200--Sobic004G121400 Sobic007G150100 Sobic007G150100 Sobic001G003200--Sobic007G150100 Sobic006G188000 Sobic006G188000 Sobic001G003200--Sobic006G188000 Sobic003G398800 Sobic003G398800 Sobic001G003200--Sobic003G398800 Sobic001G048400 Sobic001G048400 Sobic001G003200--Sobic001G048400 Sobic003G431700 Sobic003G431700 Sobic001G003200--Sobic003G431700 Sobic001G504400 Sobic001G504400 Sobic001G003200--Sobic001G504400 Sobic001G128600--Sobic002G112400 Sobic006G265900 Sobic006G265900 Sobic001G128600--Sobic006G265900 Sobic008G006100 Sobic008G006100 Sobic001G128600--Sobic008G006100 Sobic001G128600--Sobic001G122300 Sobic001G128600--Sobic001G005200 Sobic001G128600--Sobic005G100300 Sobic002G298800 Sobic002G298800 Sobic001G128600--Sobic002G298800 Sobic001G128600--Sobic009G175500 Sobic006G097500 Sobic006G097500 Sobic001G128600--Sobic006G097500 Sobic009G237000--Sobic007G103400 Sobic004G353100 Sobic004G353100 Sobic009G237000--Sobic004G353100 Sobic006G102000 Sobic006G102000 Sobic009G237000--Sobic006G102000 Sobic009G237000--Sobic002G298800 Sobic009G237000--Sobic010G035400 Sobic009G237000--Sobic001G504400 Sobic009G237000--Sobic003G233700 Sobic007G108900 Sobic007G108900 Sobic009G237000--Sobic007G108900 Sobic008G074000 Sobic008G074000 Sobic009G237000--Sobic008G074000 Sobic009G059300 Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic003G387100--Sobic010G035400 Sobic007G103400--Sobic009G237000 Sobic007G103400--Sobic002G298800 Sobic007G103400--Sobic004G353100 Sobic007G103400--Sobic010G035400 Sobic007G103400--Sobic001G504400 Sobic003G306200 Sobic003G306200 Sobic007G103400--Sobic003G306200 Sobic002G198300 Sobic002G198300 Sobic007G103400--Sobic002G198300 Sobic007G103400--Sobic003G233700 Sobic002G275300 Sobic002G275300 Sobic007G103400--Sobic002G275300 Sobic010G035400--Sobic007G103400 Sobic007G225500 Sobic007G225500 Sobic010G035400--Sobic007G225500 Sobic010G035400--Sobic004G336200 Sobic010G035400--Sobic004G353100 Sobic010G035400--Sobic009G237000 Sobic010G035400--Sobic002G275300 Sobic010G035400--Sobic003G160800 Sobic010G035400--Sobic006G207800 Sobic010G035400--Sobic003G387100
Octagon: transcription factors


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