Gene annotation
Transcriptome id Sobic.007G016500.1
Synonym Sb07g001440
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YM07
Pfam PF16594
Panther DB PTHR35165 PTHR35165:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g02200.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.007G074400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
3 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
5 Sobic.002G210800 hypothetical protein -
6 Sobic.004G028600 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.008G057300 phytosulfokine receptor precursor, putative, expressed -
8 Sobic.001G146200 OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
9 Sobic.001G157200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
10 Sobic.001G469500 transporter family protein, putative, expressed -
11 Sobic.002G035200 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
12 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
13 Sobic.008G183300 thaumatin, putative, expressed -
14 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.007G092700 - -
16 Sobic.005G131700 - -
17 Sobic.003G276000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY26, expressed -
18 Sobic.008G009100 SAG20, putative, expressed -
19 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
20 Sobic.003G321300 disease resistance protein RPS2, putative, expressed K13459: disease resistance protein RPS2


Gene co-expression network
sample Sobic007G016500 Sobic007G016500 Sobic003G031100 Sobic003G031100 Sobic007G016500--Sobic003G031100 Sobic007G074400 Sobic007G074400 Sobic007G016500--Sobic007G074400 Sobic005G217200 Sobic005G217200 Sobic007G016500--Sobic005G217200 Sobic003G363100 Sobic003G363100 Sobic007G016500--Sobic003G363100 Sobic002G210800 Sobic002G210800 Sobic007G016500--Sobic002G210800 Sobic004G028600 Sobic004G028600 Sobic007G016500--Sobic004G028600 Sobic008G057300 Sobic008G057300 Sobic007G016500--Sobic008G057300 Sobic001G146200 Sobic001G146200 Sobic007G016500--Sobic001G146200 Sobic001G157200 Sobic001G157200 Sobic007G016500--Sobic001G157200 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic005G126200 Sobic005G126200 Sobic003G031100--Sobic005G126200 Sobic005G171100 Sobic005G171100 Sobic003G031100--Sobic005G171100 Sobic003G031100--Sobic007G074400 Sobic002G024400 Sobic002G024400 Sobic003G031100--Sobic002G024400 Sobic009G073500 Sobic009G073500 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic005G131700 Sobic005G131700 Sobic003G031100--Sobic005G131700 Sobic008G146700 Sobic008G146700 Sobic003G031100--Sobic008G146700 Sobic007G074400--Sobic003G031100 Sobic007G074400--Sobic005G217200 Sobic001G319100 Sobic001G319100 Sobic007G074400--Sobic001G319100 Sobic004G237600 Sobic004G237600 Sobic007G074400--Sobic004G237600 Sobic006G174600 Sobic006G174600 Sobic007G074400--Sobic006G174600 Sobic008G142100 Sobic008G142100 Sobic007G074400--Sobic008G142100 Sobic001G318900 Sobic001G318900 Sobic007G074400--Sobic001G318900 Sobic003G321300 Sobic003G321300 Sobic007G074400--Sobic003G321300 Sobic005G229400 Sobic005G229400 Sobic007G074400--Sobic005G229400 Sobic008G189200 Sobic008G189200 Sobic005G217200--Sobic008G189200 Sobic010G210200 Sobic010G210200 Sobic005G217200--Sobic010G210200 Sobic005G217200--Sobic003G363100 Sobic009G126900 Sobic009G126900 Sobic005G217200--Sobic009G126900 Sobic005G217200--Sobic004G237600 Sobic003G276000 Sobic003G276000 Sobic005G217200--Sobic003G276000 Sobic003G244600 Sobic003G244600 Sobic005G217200--Sobic003G244600 Sobic010G162900 Sobic010G162900 Sobic005G217200--Sobic010G162900 Sobic002G172900 Sobic002G172900 Sobic005G217200--Sobic002G172900 Sobic001G469500 Sobic001G469500 Sobic003G363100--Sobic001G469500 Sobic003G363100--Sobic005G217200 Sobic010G018100 Sobic010G018100 Sobic003G363100--Sobic010G018100 Sobic009G000200 Sobic009G000200 Sobic003G363100--Sobic009G000200 Sobic003G363100--Sobic008G189200 Sobic007G135000 Sobic007G135000 Sobic003G363100--Sobic007G135000 Sobic003G363100--Sobic004G028600 Sobic002G274800 Sobic002G274800 Sobic003G363100--Sobic002G274800 Sobic003G363100--Sobic003G276000 Sobic005G221000 Sobic005G221000 Sobic002G210800--Sobic005G221000 Sobic007G034000 Sobic007G034000 Sobic002G210800--Sobic007G034000 Sobic010G212350 Sobic010G212350 Sobic002G210800--Sobic010G212350 Sobic003G315500 Sobic003G315500 Sobic002G210800--Sobic003G315500 Sobic001G069900 Sobic001G069900 Sobic002G210800--Sobic001G069900 Sobic004G162400 Sobic004G162400 Sobic002G210800--Sobic004G162400 Sobic009G120200 Sobic009G120200 Sobic002G210800--Sobic009G120200 Sobic009G161000 Sobic009G161000 Sobic002G210800--Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic002G210800--Sobic005G178100 Sobic004G028600--Sobic003G363100 Sobic010G089700 Sobic010G089700 Sobic004G028600--Sobic010G089700 Sobic007G085001 Sobic007G085001 Sobic004G028600--Sobic007G085001 Sobic004G028600--Sobic001G469500 Sobic002G249200 Sobic002G249200 Sobic004G028600--Sobic002G249200 Sobic001G190300 Sobic001G190300 Sobic004G028600--Sobic001G190300 Sobic004G068800 Sobic004G068800 Sobic004G028600--Sobic004G068800 Sobic007G092700 Sobic007G092700 Sobic004G028600--Sobic007G092700 Sobic004G281300 Sobic004G281300 Sobic004G028600--Sobic004G281300 Sobic004G092000 Sobic004G092000 Sobic008G057300--Sobic004G092000 Sobic001G339600 Sobic001G339600 Sobic008G057300--Sobic001G339600 Sobic008G057300--Sobic005G229400 Sobic003G412700 Sobic003G412700 Sobic008G057300--Sobic003G412700 Sobic001G216300 Sobic001G216300 Sobic008G057300--Sobic001G216300 Sobic007G054100 Sobic007G054100 Sobic008G057300--Sobic007G054100 Sobic001G261432 Sobic001G261432 Sobic008G057300--Sobic001G261432 Sobic003G339900 Sobic003G339900 Sobic008G057300--Sobic003G339900 Sobic007G092400 Sobic007G092400 Sobic008G057300--Sobic007G092400 Sobic001G146200--Sobic003G276000 Sobic001G146200--Sobic001G318900 Sobic001G454200 Sobic001G454200 Sobic001G146200--Sobic001G454200 Sobic003G216232 Sobic003G216232 Sobic001G146200--Sobic003G216232 Sobic001G146200--Sobic005G217200 Sobic001G146200--Sobic003G031100 Sobic010G047800 Sobic010G047800 Sobic001G146200--Sobic010G047800 Sobic001G146200--Sobic007G074400 Sobic001G146200--Sobic010G018100 Sobic002G379866 Sobic002G379866 Sobic001G157200--Sobic002G379866 Sobic002G222800 Sobic002G222800 Sobic001G157200--Sobic002G222800 Sobic001G074200 Sobic001G074200 Sobic001G157200--Sobic001G074200 Sobic005G117400 Sobic005G117400 Sobic001G157200--Sobic005G117400 Sobic004G158901 Sobic004G158901 Sobic001G157200--Sobic004G158901 Sobic004G058000 Sobic004G058000 Sobic001G157200--Sobic004G058000 Sobic007G125900 Sobic007G125900 Sobic001G157200--Sobic007G125900 Sobic005G105300 Sobic005G105300 Sobic001G157200--Sobic005G105300 Sobic004G067200 Sobic004G067200 Sobic001G157200--Sobic004G067200
Octagon: transcription factors


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