Gene annotation
Transcriptome id Sobic.008G057300.1
Synonym PSKR1, Sb08g004820, ATPSKR1
Functional annotation phytosulfokine receptor precursor, putative, expressed
UniProt A0A1B6PBX7
Pfam PF08263 PF00560
Panther DB PTHR27000 PTHR27000:SF204
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G02220 : phytosulfokin receptor 1
RAP-DB (Rice) LOC_Os04g57630.1 : phytosulfokine receptor precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G092000 expressed protein -
2 Sobic.001G339600 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
3 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
4 Sobic.003G412700 serine palmitoyltransferase 2, putative, expressed K00654: serine palmitoyltransferase
5 Sobic.001G216300 glutaredoxin domain containing protein, putative, expressed -
6 Sobic.007G054100 stress-induced protein, putative, expressed -
7 Sobic.001G261432 - -
8 Sobic.003G339900 expressed protein -
9 Sobic.007G092400 amino acid transporter, putative, expressed -
10 Sobic.001G131200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PB1 domain containing protein, expressed -
11 Sobic.003G376200 expressed protein -
12 Sobic.002G335400 OsFBX250 - F-box domain containing protein, expressed -
13 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
14 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
15 Sobic.010G097900 expressed protein -
16 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
17 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
18 Sobic.009G008100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
19 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
20 Sobic.004G237600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase


Gene co-expression network
sample Sobic008G057300 Sobic008G057300 Sobic004G092000 Sobic004G092000 Sobic008G057300--Sobic004G092000 Sobic001G339600 Sobic001G339600 Sobic008G057300--Sobic001G339600 Sobic005G229400 Sobic005G229400 Sobic008G057300--Sobic005G229400 Sobic003G412700 Sobic003G412700 Sobic008G057300--Sobic003G412700 Sobic001G216300 Sobic001G216300 Sobic008G057300--Sobic001G216300 Sobic007G054100 Sobic007G054100 Sobic008G057300--Sobic007G054100 Sobic001G261432 Sobic001G261432 Sobic008G057300--Sobic001G261432 Sobic003G339900 Sobic003G339900 Sobic008G057300--Sobic003G339900 Sobic007G092400 Sobic007G092400 Sobic008G057300--Sobic007G092400 Sobic003G376200 Sobic003G376200 Sobic004G092000--Sobic003G376200 Sobic004G092000--Sobic003G339900 Sobic004G092000--Sobic001G339600 Sobic001G314300 Sobic001G314300 Sobic004G092000--Sobic001G314300 Sobic002G073900 Sobic002G073900 Sobic004G092000--Sobic002G073900 Sobic003G138400 Sobic003G138400 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic010G089700 Sobic010G089700 Sobic004G092000--Sobic010G089700 Sobic001G339600--Sobic004G092000 Sobic001G339600--Sobic003G138400 Sobic010G214200 Sobic010G214200 Sobic001G339600--Sobic010G214200 Sobic001G339600--Sobic003G339900 Sobic008G142100 Sobic008G142100 Sobic001G339600--Sobic008G142100 Sobic002G216500 Sobic002G216500 Sobic001G339600--Sobic002G216500 Sobic004G220600 Sobic004G220600 Sobic001G339600--Sobic004G220600 Sobic001G387000 Sobic001G387000 Sobic001G339600--Sobic001G387000 Sobic001G319100 Sobic001G319100 Sobic001G339600--Sobic001G319100 Sobic010G009400 Sobic010G009400 Sobic005G229400--Sobic010G009400 Sobic002G301800 Sobic002G301800 Sobic005G229400--Sobic002G301800 Sobic001G285000 Sobic001G285000 Sobic005G229400--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic005G229400--Sobic001G045000 Sobic009G156300 Sobic009G156300 Sobic005G229400--Sobic009G156300 Sobic004G227300 Sobic004G227300 Sobic005G229400--Sobic004G227300 Sobic001G288100 Sobic001G288100 Sobic005G229400--Sobic001G288100 Sobic009G100500 Sobic009G100500 Sobic005G229400--Sobic009G100500 Sobic001G162100 Sobic001G162100 Sobic005G229400--Sobic001G162100 Sobic010G079900 Sobic010G079900 Sobic003G412700--Sobic010G079900 Sobic004G003501 Sobic004G003501 Sobic003G412700--Sobic004G003501 Sobic006G199200 Sobic006G199200 Sobic003G412700--Sobic006G199200 Sobic003G086900 Sobic003G086900 Sobic003G412700--Sobic003G086900 Sobic001G253700 Sobic001G253700 Sobic003G412700--Sobic001G253700 Sobic004G237600 Sobic004G237600 Sobic003G412700--Sobic004G237600 Sobic008G070500 Sobic008G070500 Sobic003G412700--Sobic008G070500 Sobic002G187801 Sobic002G187801 Sobic003G412700--Sobic002G187801 Sobic001G309400 Sobic001G309400 Sobic003G412700--Sobic001G309400 Sobic001G314700 Sobic001G314700 Sobic001G216300--Sobic001G314700 Sobic006G205200 Sobic006G205200 Sobic001G216300--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic001G216300--Sobic001G161200 Sobic007G196600 Sobic007G196600 Sobic001G216300--Sobic007G196600 Sobic003G352400 Sobic003G352400 Sobic001G216300--Sobic003G352400 Sobic002G185200 Sobic002G185200 Sobic001G216300--Sobic002G185200 Sobic003G337800 Sobic003G337800 Sobic001G216300--Sobic003G337800 Sobic006G146500 Sobic006G146500 Sobic001G216300--Sobic006G146500 Sobic004G006500 Sobic004G006500 Sobic001G216300--Sobic004G006500 Sobic003G308700 Sobic003G308700 Sobic007G054100--Sobic003G308700 Sobic006G042200 Sobic006G042200 Sobic007G054100--Sobic006G042200 Sobic002G273700 Sobic002G273700 Sobic007G054100--Sobic002G273700 Sobic007G054100--Sobic002G073900 Sobic003G153800 Sobic003G153800 Sobic007G054100--Sobic003G153800 Sobic002G174900 Sobic002G174900 Sobic007G054100--Sobic002G174900 Sobic007G054100--Sobic002G187801 Sobic004G096300 Sobic004G096300 Sobic007G054100--Sobic004G096300 Sobic005G090600 Sobic005G090600 Sobic007G054100--Sobic005G090600 Sobic005G207400 Sobic005G207400 Sobic001G261432--Sobic005G207400 Sobic008G168200 Sobic008G168200 Sobic001G261432--Sobic008G168200 Sobic004G130400 Sobic004G130400 Sobic001G261432--Sobic004G130400 Sobic002G294100 Sobic002G294100 Sobic001G261432--Sobic002G294100 Sobic003G212100 Sobic003G212100 Sobic001G261432--Sobic003G212100 Sobic002G238400 Sobic002G238400 Sobic001G261432--Sobic002G238400 Sobic004G025300 Sobic004G025300 Sobic001G261432--Sobic004G025300 Sobic006G087400 Sobic006G087400 Sobic001G261432--Sobic006G087400 Sobic001G205100 Sobic001G205100 Sobic001G261432--Sobic001G205100 Sobic005G119100 Sobic005G119100 Sobic003G339900--Sobic005G119100 Sobic003G339900--Sobic004G092000 Sobic007G025900 Sobic007G025900 Sobic003G339900--Sobic007G025900 Sobic002G257100 Sobic002G257100 Sobic003G339900--Sobic002G257100 Sobic003G339900--Sobic001G339600 Sobic003G339900--Sobic001G314300 Sobic003G339900--Sobic008G142100 Sobic005G072200 Sobic005G072200 Sobic003G339900--Sobic005G072200 Sobic010G273700 Sobic010G273700 Sobic003G339900--Sobic010G273700 Sobic003G410300 Sobic003G410300 Sobic007G092400--Sobic003G410300 Sobic004G135366 Sobic004G135366 Sobic007G092400--Sobic004G135366 Sobic002G034750 Sobic002G034750 Sobic007G092400--Sobic002G034750 Sobic004G089300 Sobic004G089300 Sobic007G092400--Sobic004G089300 Sobic003G038400 Sobic003G038400 Sobic007G092400--Sobic003G038400 Sobic009G085300 Sobic009G085300 Sobic007G092400--Sobic009G085300 Sobic002G349900 Sobic002G349900 Sobic007G092400--Sobic002G349900 Sobic002G243300 Sobic002G243300 Sobic007G092400--Sobic002G243300 Sobic005G003600 Sobic005G003600 Sobic007G092400--Sobic005G003600
Octagon: transcription factors


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