Gene annotation
Transcriptome id Sobic.007G132600.1
Synonym Sb07g020880, AtMYB20, MYB20
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt Q6URS1 , Q6URS5 , Q6URS6 , Q6URS7 , Q8S439 , Q6URT3 , Q6URT6 , Q6URS8 , A0A1B6PHL6 , Q6URS4 , Q6URU3 , Q6URS2 , Q6URV5 , Q6URV1 , Q6URS3 , Q6URV8 , Q6URV2 , Q6URT4 , Q6URV9
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF503
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G66230 : myb domain protein 20
RAP-DB (Rice) LOC_Os09g23620.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a020817 , Zm00025a031141 , Zm00025a005907 , Zm00025a005701 , Zm00025a005986 , Zm00025a034206 , Zm00025a046904 , Zm00025a046903 , Zm00025a047793 , Zm00025a042709 , Zm00025a032658
Brachypodium KQJ91191 , KQK00034 , KQK18687 , KQJ98346 , KQJ84327 , KQJ90159 , KQK19995 , PNT76695 , KQK01592
Barley HORVU6Hr1G067380.1 , HORVU6Hr1G067380.2 , HORVU6Hr1G067380.3 , HORVU2Hr1G028470.3 , HORVU2Hr1G028470.2 , HORVU2Hr1G028470.1 , HORVU2Hr1G028470.7 , HORVU2Hr1G028470.6 , HORVU2Hr1G028470.5 , HORVU2Hr1G028470.4 , HORVU5Hr1G103970.5 , HORVU5Hr1G103970.4 , HORVU5Hr1G103970.1 , HORVU5Hr1G103970.3 , HORVU5Hr1G103970.2 , HORVU6Hr1G073500.5 , HORVU6Hr1G073500.4 , HORVU6Hr1G073500.3 , HORVU6Hr1G073500.1 , HORVU7Hr1G041810.9 , HORVU7Hr1G041810.8 , HORVU7Hr1G041810.1 , HORVU7Hr1G041810.3 , HORVU7Hr1G041810.2 , HORVU7Hr1G041810.5 , HORVU7Hr1G041810.4 , HORVU7Hr1G041810.7 , HORVU7Hr1G041810.6 , HORVU5Hr1G081770.2 , HORVU5Hr1G081770.6 , HORVU5Hr1G081770.7 , HORVU5Hr1G081770.4 , HORVU5Hr1G081770.5 , HORVU5Hr1G081770.8 , HORVU5Hr1G060650.10 , HORVU5Hr1G060650.1 , HORVU5Hr1G060650.2 , HORVU5Hr1G060650.3 , HORVU5Hr1G060650.5 , HORVU5Hr1G060650.6 , HORVU5Hr1G060650.7 , HORVU5Hr1G060650.9
Wheat TraesCS6D02G274900 , TraesCS2B02G343800 , TraesCS2D02G444200 , TraesCS5B02G203100 , TraesCS7A02G205100 , TraesCS6A02G265300 , TraesCS5D02G326600 , TraesCS2A02G447500 , TraesCS6B02G292500 , TraesCS7B02G112400 , TraesCS7B02G112400 , TraesCS6D02G249200 , TraesCS2D02G163700 , TraesCS6A02G294000 , TraesCS5A02G205200 , TraesCS2A02G157600 , TraesCS5D02G210900 , TraesCS2B02G466500 , TraesCS7D02G208000 , TraesCS2B02G183100 , TraesCS2D02G324800 , TraesCS2A02G338200 , TraesCS6B02G324600 , TraesCS6B02G324600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G079100 - -
2 Sobic.001G287301 - -
3 Sobic.005G139800 Brix domain containing protein, putative, expressed -
4 Sobic.002G007250 - -
5 Sobic.009G209800 OsFBX49 - F-box domain containing protein, expressed -
6 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.008G042250 - -
8 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
9 Sobic.008G049701 - -
10 Sobic.008G009500 pentatricopeptide, putative, expressed -
11 Sobic.010G248200 KID-containing protein, putative, expressed -
12 Sobic.K024000 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
13 Sobic.001G128800 RNA-binding zinc finger protein, putative, expressed -
14 Sobic.001G345333 - -
15 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
16 Sobic.005G110430 - -
17 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
18 Sobic.002G108800 auxin efflux carrier component, putative, expressed -
19 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
20 Sobic.004G212800 - -


Gene co-expression network
sample Sobic007G132600 Sobic007G132600 Sobic008G079100 Sobic008G079100 Sobic007G132600--Sobic008G079100 Sobic001G287301 Sobic001G287301 Sobic007G132600--Sobic001G287301 Sobic005G139800 Sobic005G139800 Sobic007G132600--Sobic005G139800 Sobic002G007250 Sobic002G007250 Sobic007G132600--Sobic002G007250 Sobic009G209800 Sobic009G209800 Sobic007G132600--Sobic009G209800 Sobic002G410200 Sobic002G410200 Sobic007G132600--Sobic002G410200 Sobic008G042250 Sobic008G042250 Sobic007G132600--Sobic008G042250 Sobic004G076732 Sobic004G076732 Sobic007G132600--Sobic004G076732 Sobic008G049701 Sobic008G049701 Sobic007G132600--Sobic008G049701 Sobic008G079100--Sobic008G042250 Sobic008G079100--Sobic009G209800 SobicK024000 SobicK024000 Sobic008G079100--SobicK024000 Sobic003G031750 Sobic003G031750 Sobic008G079100--Sobic003G031750 Sobic001G253100 Sobic001G253100 Sobic008G079100--Sobic001G253100 Sobic005G110430 Sobic005G110430 Sobic008G079100--Sobic005G110430 Sobic008G079100--Sobic008G049701 Sobic002G062300 Sobic002G062300 Sobic008G079100--Sobic002G062300 Sobic008G009500 Sobic008G009500 Sobic008G079100--Sobic008G009500 Sobic001G287301--Sobic008G049701 Sobic001G287301--Sobic008G042250 Sobic001G287301--Sobic005G139800 Sobic001G287301--Sobic005G110430 Sobic001G287301--Sobic009G209800 SobicK009900 SobicK009900 Sobic001G287301--SobicK009900 Sobic008G157950 Sobic008G157950 Sobic001G287301--Sobic008G157950 Sobic001G287301--Sobic001G253100 Sobic001G128800 Sobic001G128800 Sobic001G287301--Sobic001G128800 Sobic005G139800--Sobic008G049701 Sobic005G139800--Sobic009G209800 Sobic005G139800--Sobic001G287301 Sobic005G139800--Sobic008G042250 Sobic001G240400 Sobic001G240400 Sobic005G139800--Sobic001G240400 Sobic005G117801 Sobic005G117801 Sobic005G139800--Sobic005G117801 Sobic002G056100 Sobic002G056100 Sobic005G139800--Sobic002G056100 Sobic005G139800--Sobic002G410200 Sobic005G221425 Sobic005G221425 Sobic005G139800--Sobic005G221425 Sobic001G345333 Sobic001G345333 Sobic002G007250--Sobic001G345333 Sobic010G248200 Sobic010G248200 Sobic002G007250--Sobic010G248200 Sobic002G108800 Sobic002G108800 Sobic002G007250--Sobic002G108800 Sobic004G212800 Sobic004G212800 Sobic002G007250--Sobic004G212800 Sobic001G243901 Sobic001G243901 Sobic002G007250--Sobic001G243901 Sobic004G164600 Sobic004G164600 Sobic002G007250--Sobic004G164600 Sobic007G073400 Sobic007G073400 Sobic002G007250--Sobic007G073400 Sobic002G253500 Sobic002G253500 Sobic002G007250--Sobic002G253500 Sobic002G007250--Sobic008G042250 Sobic009G209800--Sobic008G049701 Sobic009G209800--Sobic001G253100 Sobic009G209800--Sobic005G139800 Sobic009G209800--Sobic001G240400 Sobic009G209800--Sobic008G042250 Sobic009G209800--Sobic005G117801 Sobic009G209800--Sobic002G056100 Sobic009G209800--Sobic005G221425 Sobic009G209800--Sobic002G410200 Sobic002G410200--Sobic004G076732 Sobic002G410200--Sobic009G209800 Sobic002G410200--SobicK009900 Sobic002G410200--Sobic001G253100 Sobic003G244800 Sobic003G244800 Sobic002G410200--Sobic003G244800 Sobic002G410200--Sobic005G139800 Sobic002G410200--Sobic008G042250 Sobic002G410200--Sobic008G009500 Sobic002G410200--Sobic008G049701 Sobic008G042250--Sobic005G110430 Sobic008G042250--Sobic008G049701 Sobic008G042250--Sobic001G287301 Sobic008G042250--Sobic001G253100 Sobic008G042250--Sobic008G157950 Sobic008G042250--Sobic009G209800 Sobic008G042250--SobicK009900 Sobic008G042250--Sobic005G117801 Sobic008G042250--Sobic004G164600 Sobic004G076732--SobicK009900 Sobic004G076732--Sobic002G410200 Sobic004G076732--Sobic001G253100 Sobic004G076732--Sobic008G009500 Sobic004G076732--Sobic007G073400 Sobic004G076732--Sobic009G209800 Sobic004G076732--Sobic008G042250 Sobic004G076732--Sobic005G110430 Sobic004G076732--Sobic004G212800 Sobic008G049701--Sobic001G287301 Sobic008G049701--Sobic008G042250 Sobic008G049701--Sobic009G209800 Sobic008G049701--Sobic005G110430 Sobic008G049701--Sobic005G139800 Sobic008G049701--Sobic001G253100 Sobic008G049701--Sobic005G117801 Sobic008G049701--SobicK009900 Sobic008G049701--Sobic001G240400
Octagon: transcription factors


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