Gene annotation
Transcriptome id Sobic.008G012300.1
Synonym Sb08g001140, ATRR4, ARR9
Functional annotation OsRR10 type-A response regulator, expressed
UniProt A0A1B6PAQ9
Pfam PF00072
Panther DB PTHR26402 PTHR26402:SF574
NCBI CDD -
KEGG Orthology K14492; two-component response regulator ARR-A family
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT3G57040 : response regulator 9
RAP-DB (Rice) LOC_Os11g04720.2 : OsRR10 type-A response regulator, expressed
MaizeGDB (Corn) Zm00025a039115 , Zm00025a053682
Brachypodium -
Barley HORVU5Hr1G043090.5 , HORVU5Hr1G043090.4 , HORVU5Hr1G043090.7 , HORVU5Hr1G043090.6 , HORVU5Hr1G043090.1 , HORVU5Hr1G043090.3 , HORVU5Hr1G043090.2
Wheat TraesCS5B02G132900 , TraesCS5B02G132900 , TraesCS3D02G494600 , TraesCS5A02G131600 , TraesCS5A02G131600 , TraesCS5D02G140200 , TraesCS3D02G494600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G072400 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.003G238200 receptor-like protein kinase, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.001G392000 WD40-like Beta Propeller Repeat family protein, expressed -
4 Sobic.003G125000 serpin domain containing protein, putative, expressed K13963: serpin B
5 Sobic.001G303600 respiratory burst oxidase protein B, putative, expressed -
6 Sobic.005G005800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase-23 precursor, putative, expressed K05909: laccase
7 Sobic.004G012200 phytosulfokine receptor precursor, putative, expressed -
8 Sobic.006G194700 zinc finger, C3HC4 type domain containing protein, expressed K10663: E3 ubiquitin-protein ligase ATL4
9 Sobic.001G058000 - -
10 Sobic.007G003000 no apical meristem protein, putative, expressed -
11 Sobic.001G160400 integral membrane protein DUF6 containing protein, expressed -
12 Sobic.008G010700 RGH1A, putative, expressed -
13 Sobic.005G205550 - -
14 Sobic.009G133100 cytochrome P450 72A1, putative, expressed -
15 Sobic.005G013800 WRKY104, expressed -
16 Sobic.005G161500 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
17 Sobic.005G219900 NB-ARC domain containing protein, expressed -
18 Sobic.004G156100 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G364200 cytochrome P450, putative, expressed -
20 Sobic.004G101100 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic008G012300 Sobic008G012300 Sobic004G072400 Sobic004G072400 Sobic008G012300--Sobic004G072400 Sobic003G238200 Sobic003G238200 Sobic008G012300--Sobic003G238200 Sobic001G392000 Sobic001G392000 Sobic008G012300--Sobic001G392000 Sobic003G125000 Sobic003G125000 Sobic008G012300--Sobic003G125000 Sobic001G303600 Sobic001G303600 Sobic008G012300--Sobic001G303600 Sobic005G005800 Sobic005G005800 Sobic008G012300--Sobic005G005800 Sobic004G012200 Sobic004G012200 Sobic008G012300--Sobic004G012200 Sobic006G194700 Sobic006G194700 Sobic008G012300--Sobic006G194700 Sobic001G058000 Sobic001G058000 Sobic008G012300--Sobic001G058000 Sobic009G133100 Sobic009G133100 Sobic004G072400--Sobic009G133100 Sobic004G072400--Sobic001G058000 Sobic001G364200 Sobic001G364200 Sobic004G072400--Sobic001G364200 Sobic007G131300 Sobic007G131300 Sobic004G072400--Sobic007G131300 Sobic008G055650 Sobic008G055650 Sobic004G072400--Sobic008G055650 Sobic004G101100 Sobic004G101100 Sobic004G072400--Sobic004G101100 Sobic005G050900 Sobic005G050900 Sobic004G072400--Sobic005G050900 Sobic004G072400--Sobic001G392000 Sobic004G233900 Sobic004G233900 Sobic004G072400--Sobic004G233900 Sobic004G126200 Sobic004G126200 Sobic003G238200--Sobic004G126200 Sobic003G270000 Sobic003G270000 Sobic003G238200--Sobic003G270000 Sobic005G154800 Sobic005G154800 Sobic003G238200--Sobic005G154800 Sobic003G238200--Sobic001G303600 Sobic003G238200--Sobic001G392000 Sobic007G148100 Sobic007G148100 Sobic003G238200--Sobic007G148100 Sobic008G010700 Sobic008G010700 Sobic003G238200--Sobic008G010700 Sobic008G055700 Sobic008G055700 Sobic003G238200--Sobic008G055700 Sobic004G162700 Sobic004G162700 Sobic003G238200--Sobic004G162700 Sobic001G392000--Sobic001G303600 Sobic004G156100 Sobic004G156100 Sobic001G392000--Sobic004G156100 Sobic001G392000--Sobic003G270000 Sobic001G392000--Sobic004G072400 Sobic001G392000--Sobic008G010700 Sobic005G205550 Sobic005G205550 Sobic001G392000--Sobic005G205550 Sobic001G392000--Sobic007G131300 Sobic001G392000--Sobic009G133100 Sobic001G392000--Sobic004G126200 Sobic001G270200 Sobic001G270200 Sobic003G125000--Sobic001G270200 Sobic001G160400 Sobic001G160400 Sobic003G125000--Sobic001G160400 Sobic001G272700 Sobic001G272700 Sobic003G125000--Sobic001G272700 Sobic003G125000--Sobic004G072400 Sobic005G161500 Sobic005G161500 Sobic003G125000--Sobic005G161500 Sobic006G092200 Sobic006G092200 Sobic003G125000--Sobic006G092200 Sobic007G165000 Sobic007G165000 Sobic003G125000--Sobic007G165000 Sobic003G125000--Sobic001G303600 Sobic001G288900 Sobic001G288900 Sobic003G125000--Sobic001G288900 Sobic001G303600--Sobic001G392000 Sobic001G303600--Sobic001G160400 Sobic001G303600--Sobic004G126200 Sobic001G303600--Sobic008G010700 Sobic001G303600--Sobic003G270000 Sobic001G303600--Sobic005G205550 Sobic001G303600--Sobic004G012200 Sobic001G303600--Sobic003G238200 Sobic001G303600--Sobic005G154800 Sobic005G005800--Sobic004G072400 Sobic005G005800--Sobic001G058000 Sobic005G005800--Sobic001G392000 Sobic005G005800--Sobic006G194700 Sobic005G005800--Sobic001G303600 Sobic007G003000 Sobic007G003000 Sobic005G005800--Sobic007G003000 Sobic005G005800--Sobic003G238200 Sobic005G005800--Sobic009G133100 Sobic005G005800--Sobic005G205550 Sobic004G012200--Sobic001G303600 Sobic004G012200--Sobic001G392000 Sobic004G012200--Sobic008G010700 Sobic004G012200--Sobic003G270000 Sobic004G012200--Sobic001G160400 Sobic004G012200--Sobic004G126200 Sobic008G078800 Sobic008G078800 Sobic004G012200--Sobic008G078800 Sobic004G012200--Sobic004G072400 Sobic004G012200--Sobic004G156100 Sobic006G194700--Sobic004G101100 Sobic006G194700--Sobic004G072400 Sobic006G194700--Sobic001G392000 Sobic006G194700--Sobic001G058000 Sobic006G194700--Sobic001G160400 Sobic006G194700--Sobic004G233900 Sobic006G069400 Sobic006G069400 Sobic006G194700--Sobic006G069400 Sobic006G194700--Sobic008G010700 Sobic006G194700--Sobic005G005800 Sobic001G058000--Sobic004G072400 Sobic001G058000--Sobic009G133100 Sobic001G058000--Sobic004G233900 Sobic001G058000--Sobic001G364200 Sobic009G190900 Sobic009G190900 Sobic001G058000--Sobic009G190900 Sobic001G058000--Sobic005G050900 Sobic001G058000--Sobic004G101100 Sobic001G058000--Sobic007G131300 Sobic001G058000--Sobic005G005800
Octagon: transcription factors


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