Gene annotation
Transcriptome id Sobic.008G059700.1
Synonym Sb08g005030
Functional annotation expressed protein
UniProt C5YT58
Pfam -
Panther DB PTHR34964 PTHR34964:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30770 : Putative membrane lipoprotein
RAP-DB (Rice) LOC_Os12g08150.1 : expressed protein
MaizeGDB (Corn) Zm00025a015622 , Zm00025a054086
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G092500 protein kinase domain containing protein, expressed -
2 Sobic.008G043200 - -
3 Sobic.010G016200 expressed protein -
4 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
5 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
6 Sobic.005G191300 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.003G004000 - -
8 Sobic.010G040400 polygalacturonase, putative, expressed -
9 Sobic.001G167300 - -
10 Sobic.001G089400 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
11 Sobic.004G192600 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.001G287400 VQ domain containing protein, putative, expressed -
13 Sobic.001G332000 pollen allergen, putative, expressed -
14 Sobic.001G261416 - K01858: INO1, myo-inositol-1-phosphate synthase
15 Sobic.009G110700 OsFBL58 - F-box domain and LRR containing protein, expressed -
16 Sobic.009G175400 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
17 Sobic.010G276100 transporter family protein, putative, expressed -
18 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
19 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
20 Sobic.010G090200 OsMADS63 - MADS-box family gene with MIKC , type-box, expressed -


Gene co-expression network
sample Sobic008G059700 Sobic008G059700 Sobic001G092500 Sobic001G092500 Sobic008G059700--Sobic001G092500 Sobic008G043200 Sobic008G043200 Sobic008G059700--Sobic008G043200 Sobic010G016200 Sobic010G016200 Sobic008G059700--Sobic010G016200 Sobic010G207800 Sobic010G207800 Sobic008G059700--Sobic010G207800 Sobic007G215200 Sobic007G215200 Sobic008G059700--Sobic007G215200 Sobic005G191300 Sobic005G191300 Sobic008G059700--Sobic005G191300 Sobic003G004000 Sobic003G004000 Sobic008G059700--Sobic003G004000 Sobic010G040400 Sobic010G040400 Sobic008G059700--Sobic010G040400 Sobic001G167300 Sobic001G167300 Sobic008G059700--Sobic001G167300 Sobic001G092500--Sobic010G040400 Sobic010G276100 Sobic010G276100 Sobic001G092500--Sobic010G276100 Sobic001G092500--Sobic005G191300 Sobic009G175400 Sobic009G175400 Sobic001G092500--Sobic009G175400 Sobic001G092500--Sobic008G043200 Sobic001G092500--Sobic010G016200 Sobic008G043300 Sobic008G043300 Sobic001G092500--Sobic008G043300 Sobic001G332000 Sobic001G332000 Sobic001G092500--Sobic001G332000 Sobic005G145400 Sobic005G145400 Sobic001G092500--Sobic005G145400 Sobic008G043200--Sobic010G016200 Sobic008G043200--Sobic005G145400 Sobic008G043200--Sobic009G175400 Sobic001G089400 Sobic001G089400 Sobic008G043200--Sobic001G089400 Sobic008G043200--Sobic010G040400 Sobic008G043200--Sobic007G215200 Sobic008G043200--Sobic001G092500 Sobic008G043200--Sobic010G207800 Sobic008G043200--Sobic001G332000 Sobic010G016200--Sobic008G043200 Sobic010G016200--Sobic010G040400 Sobic010G016200--Sobic001G092500 Sobic010G016200--Sobic009G175400 Sobic010G016200--Sobic007G215200 Sobic010G016200--Sobic001G332000 Sobic010G016200--Sobic010G207800 Sobic010G016200--Sobic005G145400 Sobic010G016200--Sobic001G089400 Sobic007G014000 Sobic007G014000 Sobic010G207800--Sobic007G014000 Sobic010G207800--Sobic007G215200 Sobic001G261416 Sobic001G261416 Sobic010G207800--Sobic001G261416 Sobic010G090200 Sobic010G090200 Sobic010G207800--Sobic010G090200 Sobic010G216100 Sobic010G216100 Sobic010G207800--Sobic010G216100 Sobic005G006100 Sobic005G006100 Sobic010G207800--Sobic005G006100 Sobic010G240300 Sobic010G240300 Sobic010G207800--Sobic010G240300 Sobic010G207800--Sobic001G167300 Sobic001G287400 Sobic001G287400 Sobic010G207800--Sobic001G287400 Sobic007G215200--Sobic010G207800 Sobic007G215200--Sobic001G261416 Sobic007G215200--Sobic001G332000 Sobic007G215200--Sobic010G090200 Sobic001G329200 Sobic001G329200 Sobic007G215200--Sobic001G329200 Sobic007G215200--Sobic001G287400 Sobic007G215200--Sobic007G014000 Sobic001G171300 Sobic001G171300 Sobic007G215200--Sobic001G171300 Sobic007G215200--Sobic010G216100 Sobic005G191300--Sobic001G092500 Sobic007G042800 Sobic007G042800 Sobic005G191300--Sobic007G042800 Sobic005G191300--Sobic008G043300 Sobic005G204600 Sobic005G204600 Sobic005G191300--Sobic005G204600 Sobic005G191300--Sobic010G040400 Sobic005G191300--Sobic010G016200 Sobic005G191300--Sobic010G276100 Sobic009G110700 Sobic009G110700 Sobic005G191300--Sobic009G110700 Sobic005G191300--Sobic008G043200 Sobic003G004000--Sobic001G167300 Sobic004G192600 Sobic004G192600 Sobic003G004000--Sobic004G192600 Sobic003G004000--Sobic001G089400 Sobic003G004000--Sobic008G043200 Sobic008G024200 Sobic008G024200 Sobic003G004000--Sobic008G024200 Sobic003G004000--Sobic010G207800 Sobic010G121700 Sobic010G121700 Sobic003G004000--Sobic010G121700 Sobic003G004000--Sobic005G006100 Sobic009G234900 Sobic009G234900 Sobic003G004000--Sobic009G234900 Sobic010G040400--Sobic009G175400 Sobic010G040400--Sobic010G276100 Sobic010G144700 Sobic010G144700 Sobic010G040400--Sobic010G144700 Sobic010G040400--Sobic001G332000 Sobic005G040700 Sobic005G040700 Sobic010G040400--Sobic005G040700 Sobic010G040400--Sobic001G092500 Sobic009G082900 Sobic009G082900 Sobic010G040400--Sobic009G082900 Sobic010G051000 Sobic010G051000 Sobic010G040400--Sobic010G051000 Sobic001G288400 Sobic001G288400 Sobic010G040400--Sobic001G288400 Sobic001G167300--Sobic003G004000 Sobic001G167300--Sobic005G006100 Sobic001G167300--Sobic010G207800 Sobic007G122600 Sobic007G122600 Sobic001G167300--Sobic007G122600 Sobic001G167300--Sobic008G024200 Sobic001G167300--Sobic004G192600 Sobic001G167300--Sobic001G089400 Sobic001G167300--Sobic009G234900 Sobic005G189100 Sobic005G189100 Sobic001G167300--Sobic005G189100
Octagon: transcription factors


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