Gene annotation
Transcriptome id Sobic.008G158200.1
Synonym
Functional annotation -
UniProt A0A1B6PE02
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G272300 cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed -
2 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
3 Sobic.005G043000 heat shock protein-related, putative, expressed -
4 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
5 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
6 Sobic.007G215900 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.005G168800 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
8 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
9 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
10 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
11 Sobic.010G226400 expressed protein -
12 Sobic.001G462700 expressed protein -
13 Sobic.003G139300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in flower and root, expression induced by IAA treatment"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.006G125100 ubiquitin family protein, putative, expressed -
16 Sobic.009G229000 expressed protein -
17 Sobic.003G416300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.009G120000 - -
19 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
20 Sobic.001G147900 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic008G158200 Sobic008G158200 Sobic010G272300 Sobic010G272300 Sobic008G158200--Sobic010G272300 Sobic001G082600 Sobic001G082600 Sobic008G158200--Sobic001G082600 Sobic005G043000 Sobic005G043000 Sobic008G158200--Sobic005G043000 Sobic005G063300 Sobic005G063300 Sobic008G158200--Sobic005G063300 Sobic003G079400 Sobic003G079400 Sobic008G158200--Sobic003G079400 Sobic007G215900 Sobic007G215900 Sobic008G158200--Sobic007G215900 Sobic005G168800 Sobic005G168800 Sobic008G158200--Sobic005G168800 Sobic006G059700 Sobic006G059700 Sobic008G158200--Sobic006G059700 Sobic001G243600 Sobic001G243600 Sobic008G158200--Sobic001G243600 Sobic010G110800 Sobic010G110800 Sobic010G272300--Sobic010G110800 Sobic010G272300--Sobic006G059700 Sobic001G147900 Sobic001G147900 Sobic010G272300--Sobic001G147900 Sobic010G272300--Sobic005G043000 Sobic003G280400 Sobic003G280400 Sobic010G272300--Sobic003G280400 Sobic006G256900 Sobic006G256900 Sobic010G272300--Sobic006G256900 Sobic010G272300--Sobic001G082600 Sobic003G011600 Sobic003G011600 Sobic010G272300--Sobic003G011600 Sobic003G404600 Sobic003G404600 Sobic010G272300--Sobic003G404600 Sobic001G082600--Sobic003G079400 Sobic004G046200 Sobic004G046200 Sobic001G082600--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic001G082600--Sobic006G044100 Sobic001G082600--Sobic003G011600 Sobic003G255200 Sobic003G255200 Sobic001G082600--Sobic003G255200 Sobic001G082600--Sobic007G215900 Sobic008G106700 Sobic008G106700 Sobic001G082600--Sobic008G106700 Sobic004G176600 Sobic004G176600 Sobic001G082600--Sobic004G176600 Sobic009G179900 Sobic009G179900 Sobic001G082600--Sobic009G179900 Sobic002G312900 Sobic002G312900 Sobic005G043000--Sobic002G312900 Sobic005G043000--Sobic010G272300 Sobic005G043000--Sobic006G059700 Sobic007G161400 Sobic007G161400 Sobic005G043000--Sobic007G161400 Sobic002G196100 Sobic002G196100 Sobic005G043000--Sobic002G196100 Sobic005G043000--Sobic001G147900 Sobic005G043000--Sobic001G082600 Sobic008G128900 Sobic008G128900 Sobic005G043000--Sobic008G128900 Sobic003G366600 Sobic003G366600 Sobic005G043000--Sobic003G366600 Sobic007G005700 Sobic007G005700 Sobic005G063300--Sobic007G005700 Sobic003G155600 Sobic003G155600 Sobic005G063300--Sobic003G155600 Sobic005G063300--Sobic003G255200 Sobic010G015300 Sobic010G015300 Sobic005G063300--Sobic010G015300 Sobic008G144600 Sobic008G144600 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic003G079400--Sobic004G046200 Sobic003G079400--Sobic001G082600 Sobic006G197100 Sobic006G197100 Sobic003G079400--Sobic006G197100 Sobic002G003800 Sobic002G003800 Sobic003G079400--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic003G079400--Sobic004G042000 Sobic003G079400--Sobic008G106700 Sobic003G016100 Sobic003G016100 Sobic003G079400--Sobic003G016100 Sobic004G349125 Sobic004G349125 Sobic003G079400--Sobic004G349125 Sobic009G187200 Sobic009G187200 Sobic003G079400--Sobic009G187200 Sobic002G125700 Sobic002G125700 Sobic007G215900--Sobic002G125700 Sobic003G352300 Sobic003G352300 Sobic007G215900--Sobic003G352300 Sobic007G215900--Sobic001G082600 Sobic002G287100 Sobic002G287100 Sobic007G215900--Sobic002G287100 Sobic006G092500 Sobic006G092500 Sobic007G215900--Sobic006G092500 Sobic002G375400 Sobic002G375400 Sobic007G215900--Sobic002G375400 Sobic007G215900--Sobic001G147900 Sobic010G259600 Sobic010G259600 Sobic007G215900--Sobic010G259600 Sobic004G348400 Sobic004G348400 Sobic007G215900--Sobic004G348400 Sobic003G416300 Sobic003G416300 Sobic005G168800--Sobic003G416300 Sobic005G168800--Sobic003G079400 Sobic005G168800--Sobic001G082600 Sobic005G168800--Sobic004G046200 Sobic005G168800--Sobic008G106700 Sobic003G050200 Sobic003G050200 Sobic005G168800--Sobic003G050200 Sobic005G168800--Sobic009G179900 Sobic001G139100 Sobic001G139100 Sobic005G168800--Sobic001G139100 Sobic001G325400 Sobic001G325400 Sobic005G168800--Sobic001G325400 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic006G059700--Sobic003G280400 Sobic006G059700--Sobic010G272300 Sobic010G001000 Sobic010G001000 Sobic006G059700--Sobic010G001000 Sobic006G059700--Sobic003G366600 Sobic006G059700--Sobic001G147900 Sobic006G125100 Sobic006G125100 Sobic006G059700--Sobic006G125100 Sobic006G059700--Sobic002G312900 Sobic004G273400 Sobic004G273400 Sobic001G243600--Sobic004G273400 Sobic005G213200 Sobic005G213200 Sobic001G243600--Sobic005G213200 Sobic001G243500 Sobic001G243500 Sobic001G243600--Sobic001G243500 Sobic001G100700 Sobic001G100700 Sobic001G243600--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic001G243600--Sobic009G120000 Sobic001G243600--Sobic002G375400 Sobic009G106800 Sobic009G106800 Sobic001G243600--Sobic009G106800 Sobic005G084600 Sobic005G084600 Sobic001G243600--Sobic005G084600 Sobic001G444400 Sobic001G444400 Sobic001G243600--Sobic001G444400
Octagon: transcription factors


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