Gene annotation
Transcriptome id Sobic.008G173500.1
Synonym
Functional annotation -
UniProt A0A1B6PE84
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G173601 - -
2 Sobic.007G164400 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
3 Sobic.002G261300 expressed protein -
4 Sobic.010G070300 DNA binding protein, putative, expressed -
5 Sobic.010G206800 expressed protein -
6 Sobic.007G047500 B3 DNA binding domain containing protein, expressed -
7 Sobic.006G277800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.006G072201 - -
9 Sobic.001G183700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
10 Sobic.010G081100 lipase, putative, expressed -
11 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G159900 uncharacterized protein At4g06744 precursor, putative, expressed -
13 Sobic.006G157900 C2 domain containing protein, putative, expressed -
14 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.007G030501 - -
17 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
18 Sobic.002G361800 expressed protein -
19 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase


Gene co-expression network
sample Sobic008G173500 Sobic008G173500 Sobic008G173601 Sobic008G173601 Sobic008G173500--Sobic008G173601 Sobic007G164400 Sobic007G164400 Sobic008G173500--Sobic007G164400 Sobic002G261300 Sobic002G261300 Sobic008G173500--Sobic002G261300 Sobic010G070300 Sobic010G070300 Sobic008G173500--Sobic010G070300 Sobic010G206800 Sobic010G206800 Sobic008G173500--Sobic010G206800 Sobic007G047500 Sobic007G047500 Sobic008G173500--Sobic007G047500 Sobic006G277800 Sobic006G277800 Sobic008G173500--Sobic006G277800 Sobic006G072201 Sobic006G072201 Sobic008G173500--Sobic006G072201 Sobic001G183700 Sobic001G183700 Sobic008G173500--Sobic001G183700 Sobic010G270700 Sobic010G270700 Sobic008G173601--Sobic010G270700 Sobic008G173601--Sobic008G173500 Sobic001G242000 Sobic001G242000 Sobic008G173601--Sobic001G242000 Sobic008G177400 Sobic008G177400 Sobic008G173601--Sobic008G177400 Sobic003G282100 Sobic003G282100 Sobic008G173601--Sobic003G282100 Sobic010G081100 Sobic010G081100 Sobic008G173601--Sobic010G081100 Sobic004G316350 Sobic004G316350 Sobic008G173601--Sobic004G316350 Sobic006G243600 Sobic006G243600 Sobic008G173601--Sobic006G243600 Sobic002G023200 Sobic002G023200 Sobic008G173601--Sobic002G023200 Sobic007G164400--Sobic002G261300 Sobic001G434800 Sobic001G434800 Sobic007G164400--Sobic001G434800 Sobic009G183900 Sobic009G183900 Sobic007G164400--Sobic009G183900 Sobic007G164400--Sobic006G277800 Sobic007G164400--Sobic008G173500 Sobic001G382900 Sobic001G382900 Sobic007G164400--Sobic001G382900 Sobic004G229400 Sobic004G229400 Sobic007G164400--Sobic004G229400 Sobic005G110406 Sobic005G110406 Sobic007G164400--Sobic005G110406 Sobic002G351300 Sobic002G351300 Sobic007G164400--Sobic002G351300 Sobic002G261300--Sobic007G164400 Sobic007G030501 Sobic007G030501 Sobic002G261300--Sobic007G030501 Sobic001G159900 Sobic001G159900 Sobic002G261300--Sobic001G159900 Sobic004G234100 Sobic004G234100 Sobic002G261300--Sobic004G234100 Sobic002G261300--Sobic001G434800 Sobic002G261300--Sobic006G277800 Sobic001G360400 Sobic001G360400 Sobic002G261300--Sobic001G360400 Sobic002G354200 Sobic002G354200 Sobic002G261300--Sobic002G354200 Sobic002G250000 Sobic002G250000 Sobic002G261300--Sobic002G250000 Sobic010G070300--Sobic001G183700 Sobic010G070300--Sobic007G047500 Sobic010G113100 Sobic010G113100 Sobic010G070300--Sobic010G113100 Sobic006G251400 Sobic006G251400 Sobic010G070300--Sobic006G251400 Sobic008G164450 Sobic008G164450 Sobic010G070300--Sobic008G164450 Sobic004G029100 Sobic004G029100 Sobic010G070300--Sobic004G029100 Sobic002G385500 Sobic002G385500 Sobic010G070300--Sobic002G385500 Sobic002G042200 Sobic002G042200 Sobic010G070300--Sobic002G042200 Sobic004G119600 Sobic004G119600 Sobic010G070300--Sobic004G119600 Sobic010G206800--Sobic001G360400 Sobic010G206800--Sobic007G030501 Sobic003G368600 Sobic003G368600 Sobic010G206800--Sobic003G368600 Sobic010G206800--Sobic002G261300 Sobic010G206800--Sobic007G047500 Sobic006G274933 Sobic006G274933 Sobic010G206800--Sobic006G274933 Sobic001G235800 Sobic001G235800 Sobic010G206800--Sobic001G235800 Sobic010G252500 Sobic010G252500 Sobic010G206800--Sobic010G252500 Sobic010G206800--Sobic001G159900 Sobic007G047500--Sobic001G360400 Sobic007G047500--Sobic010G070300 Sobic007G047500--Sobic010G113100 Sobic007G047500--Sobic007G030501 Sobic004G212600 Sobic004G212600 Sobic007G047500--Sobic004G212600 Sobic007G047500--Sobic010G206800 Sobic003G351600 Sobic003G351600 Sobic007G047500--Sobic003G351600 Sobic010G204200 Sobic010G204200 Sobic007G047500--Sobic010G204200 Sobic007G021900 Sobic007G021900 Sobic007G047500--Sobic007G021900 Sobic006G277500 Sobic006G277500 Sobic006G277800--Sobic006G277500 Sobic006G277800--Sobic005G110406 Sobic006G277800--Sobic006G072201 Sobic007G094300 Sobic007G094300 Sobic006G277800--Sobic007G094300 Sobic010G135100 Sobic010G135100 Sobic006G277800--Sobic010G135100 Sobic006G277800--Sobic002G261300 Sobic008G068300 Sobic008G068300 Sobic006G277800--Sobic008G068300 Sobic008G148200 Sobic008G148200 Sobic006G277800--Sobic008G148200 Sobic008G077550 Sobic008G077550 Sobic006G277800--Sobic008G077550 Sobic006G072201--Sobic008G148200 Sobic006G072201--Sobic006G277800 Sobic006G072201--Sobic007G094300 Sobic006G104700 Sobic006G104700 Sobic006G072201--Sobic006G104700 Sobic006G072201--Sobic002G261300 Sobic002G099451 Sobic002G099451 Sobic006G072201--Sobic002G099451 Sobic004G121700 Sobic004G121700 Sobic006G072201--Sobic004G121700 Sobic003G399700 Sobic003G399700 Sobic006G072201--Sobic003G399700 Sobic001G256800 Sobic001G256800 Sobic006G072201--Sobic001G256800 Sobic001G183700--Sobic010G070300 Sobic001G183700--Sobic001G360400 Sobic004G009500 Sobic004G009500 Sobic001G183700--Sobic004G009500 Sobic003G015300 Sobic003G015300 Sobic001G183700--Sobic003G015300 Sobic001G183700--Sobic010G113100 Sobic001G375200 Sobic001G375200 Sobic001G183700--Sobic001G375200 Sobic003G152200 Sobic003G152200 Sobic001G183700--Sobic003G152200 Sobic001G183700--Sobic006G251400 Sobic001G183700--Sobic002G385500
Octagon: transcription factors


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