Gene annotation
Transcriptome id Sobic.008G190200.1
Synonym Sb08g023060
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ligA, putative, expressed
UniProt A0A1B6PEL5
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G62680 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os12g44110.2 : ligA, putative, expressed
MaizeGDB (Corn) Zm00025a017093 , Zm00025a004867 , Zm00025a007621
Brachypodium PNT68390 , KQK13743 , KQJ85605
Barley HORVU5Hr1G000800.9 , HORVU5Hr1G000800.8 , HORVU5Hr1G000800.3 , HORVU5Hr1G000800.2 , HORVU5Hr1G000800.1 , HORVU5Hr1G000800.7 , HORVU5Hr1G000800.6 , HORVU5Hr1G000800.5 , HORVU5Hr1G000800.4 , HORVU4Hr1G004460.1 , HORVU4Hr1G004460.3 , HORVU4Hr1G004460.4 , HORVU4Hr1G004460.5 , HORVU4Hr1G004460.6 , HORVU4Hr1G004460.7 , HORVU1Hr1G074550.6 , HORVU1Hr1G074550.7 , HORVU1Hr1G074550.4 , HORVU1Hr1G074550.5 , HORVU1Hr1G074550.2 , HORVU1Hr1G074550.3 , HORVU1Hr1G074550.1 , HORVU1Hr1G074550.8 , HORVU1Hr1G074550.9 , HORVU7Hr1G018540.1 , HORVU7Hr1G018540.3 , HORVU7Hr1G018540.2 , HORVU2Hr1G006820.1 , HORVU2Hr1G006820.2 , HORVU2Hr1G006820.3 , HORVU5Hr1G000800.13 , HORVU5Hr1G000800.12 , HORVU5Hr1G000800.11 , HORVU5Hr1G000800.10 , HORVU5Hr1G000800.14
Wheat TraesCS4D02G026800 , TraesCS4A02G283900 , TraesCS5D02G012500 , TraesCS5A02G037900 , TraesCS5B02G039100 , TraesCS2D02G044200 , TraesCS2A02G045500 , TraesCS4B02G029600 , TraesCS2B02G057700 , TraesCS5D02G045300 , TraesCS5A02G004400 , TraesCS2B02G057600 , TraesCS5B02G001100 , TraesCS1A02G257400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G097500 - -
2 Sobic.005G142700 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
3 Sobic.002G001900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
4 Sobic.003G397600 expressed protein -
5 Sobic.002G136100 genetic modifier, putative, expressed -
6 Sobic.003G157900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycine-rich protein, putative, expressed -
7 Sobic.001G314400 OsMADS56 - MADS-box family gene with MIKCc type-box, expressed -
8 Sobic.004G223400 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.002G108500 cytochrome P450, putative, expressed -
10 Sobic.002G216900 - -
11 Sobic.K028200 cytochrome P450, putative, expressed -
12 Sobic.008G046400 - -
13 Sobic.009G045600 pro-resilin precursor, putative, expressed -
14 Sobic.002G272700 cytochrome P450, putative, expressed -
15 Sobic.001G276300 peptide transporter PTR2, putative, expressed -
16 Sobic.002G201900 transporter family protein, putative, expressed -
17 Sobic.006G212800 expressed protein -
18 Sobic.002G200700 expressed protein -
19 Sobic.003G371250 - -
20 Sobic.010G178000 - -


Gene co-expression network
sample Sobic008G190200 Sobic008G190200 Sobic003G097500 Sobic003G097500 Sobic008G190200--Sobic003G097500 Sobic005G142700 Sobic005G142700 Sobic008G190200--Sobic005G142700 Sobic002G001900 Sobic002G001900 Sobic008G190200--Sobic002G001900 Sobic003G397600 Sobic003G397600 Sobic008G190200--Sobic003G397600 Sobic002G136100 Sobic002G136100 Sobic008G190200--Sobic002G136100 Sobic003G157900 Sobic003G157900 Sobic008G190200--Sobic003G157900 Sobic001G314400 Sobic001G314400 Sobic008G190200--Sobic001G314400 Sobic004G223400 Sobic004G223400 Sobic008G190200--Sobic004G223400 Sobic002G108500 Sobic002G108500 Sobic008G190200--Sobic002G108500 Sobic003G328100 Sobic003G328100 Sobic003G097500--Sobic003G328100 Sobic007G169100 Sobic007G169100 Sobic003G097500--Sobic007G169100 Sobic006G226601 Sobic006G226601 Sobic003G097500--Sobic006G226601 Sobic004G006400 Sobic004G006400 Sobic003G097500--Sobic004G006400 Sobic006G140700 Sobic006G140700 Sobic003G097500--Sobic006G140700 Sobic001G276300 Sobic001G276300 Sobic003G097500--Sobic001G276300 Sobic001G104600 Sobic001G104600 Sobic003G097500--Sobic001G104600 Sobic007G053800 Sobic007G053800 Sobic003G097500--Sobic007G053800 Sobic001G517700 Sobic001G517700 Sobic003G097500--Sobic001G517700 Sobic005G142700--Sobic003G157900 Sobic005G142700--Sobic001G314400 Sobic007G090900 Sobic007G090900 Sobic005G142700--Sobic007G090900 Sobic003G329700 Sobic003G329700 Sobic005G142700--Sobic003G329700 Sobic008G077500 Sobic008G077500 Sobic005G142700--Sobic008G077500 Sobic005G142700--Sobic008G190200 Sobic005G142700--Sobic002G136100 Sobic006G212800 Sobic006G212800 Sobic005G142700--Sobic006G212800 Sobic005G142700--Sobic003G397600 Sobic006G123500 Sobic006G123500 Sobic002G001900--Sobic006G123500 Sobic004G268500 Sobic004G268500 Sobic002G001900--Sobic004G268500 Sobic003G223400 Sobic003G223400 Sobic002G001900--Sobic003G223400 Sobic002G001900--Sobic001G314400 Sobic008G065200 Sobic008G065200 Sobic002G001900--Sobic008G065200 Sobic009G045600 Sobic009G045600 Sobic002G001900--Sobic009G045600 Sobic003G255900 Sobic003G255900 Sobic002G001900--Sobic003G255900 Sobic006G055000 Sobic006G055000 Sobic002G001900--Sobic006G055000 Sobic004G099700 Sobic004G099700 Sobic002G001900--Sobic004G099700 Sobic003G397600--Sobic002G136100 Sobic003G397600--Sobic003G328100 Sobic003G397600--Sobic001G314400 Sobic008G046400 Sobic008G046400 Sobic003G397600--Sobic008G046400 Sobic006G145700 Sobic006G145700 Sobic003G397600--Sobic006G145700 Sobic003G397600--Sobic006G140700 Sobic003G437800 Sobic003G437800 Sobic003G397600--Sobic003G437800 Sobic010G177800 Sobic010G177800 Sobic003G397600--Sobic010G177800 Sobic003G397600--Sobic003G329700 Sobic004G154400 Sobic004G154400 Sobic002G136100--Sobic004G154400 Sobic002G136100--Sobic006G212800 Sobic009G207900 Sobic009G207900 Sobic002G136100--Sobic009G207900 Sobic010G058200 Sobic010G058200 Sobic002G136100--Sobic010G058200 Sobic001G286600 Sobic001G286600 Sobic002G136100--Sobic001G286600 Sobic002G136100--Sobic003G328100 Sobic009G062400 Sobic009G062400 Sobic002G136100--Sobic009G062400 Sobic002G136100--Sobic003G157900 Sobic007G015500 Sobic007G015500 Sobic002G136100--Sobic007G015500 Sobic003G157900--Sobic007G090900 Sobic003G157900--Sobic006G212800 Sobic003G380200 Sobic003G380200 Sobic003G157900--Sobic003G380200 Sobic009G103000 Sobic009G103000 Sobic003G157900--Sobic009G103000 Sobic003G157900--Sobic002G136100 Sobic002G275100 Sobic002G275100 Sobic003G157900--Sobic002G275100 Sobic004G267700 Sobic004G267700 Sobic003G157900--Sobic004G267700 Sobic002G162400 Sobic002G162400 Sobic003G157900--Sobic002G162400 Sobic006G213700 Sobic006G213700 Sobic003G157900--Sobic006G213700 Sobic001G314400--Sobic002G001900 Sobic001G314400--Sobic003G397600 Sobic001G314400--Sobic005G142700 Sobic001G314400--Sobic003G223400 Sobic001G314400--Sobic003G329700 Sobic001G448300 Sobic001G448300 Sobic001G314400--Sobic001G448300 Sobic002G272700 Sobic002G272700 Sobic001G314400--Sobic002G272700 Sobic006G036300 Sobic006G036300 Sobic001G314400--Sobic006G036300 Sobic001G314400--Sobic006G123500 Sobic010G138800 Sobic010G138800 Sobic004G223400--Sobic010G138800 Sobic003G080300 Sobic003G080300 Sobic004G223400--Sobic003G080300 Sobic002G030900 Sobic002G030900 Sobic004G223400--Sobic002G030900 Sobic002G072500 Sobic002G072500 Sobic004G223400--Sobic002G072500 Sobic008G115700 Sobic008G115700 Sobic004G223400--Sobic008G115700 Sobic010G100900 Sobic010G100900 Sobic004G223400--Sobic010G100900 Sobic006G243800 Sobic006G243800 Sobic004G223400--Sobic006G243800 Sobic003G295300 Sobic003G295300 Sobic004G223400--Sobic003G295300 Sobic001G434000 Sobic001G434000 Sobic004G223400--Sobic001G434000 Sobic010G178000 Sobic010G178000 Sobic002G108500--Sobic010G178000 Sobic004G214800 Sobic004G214800 Sobic002G108500--Sobic004G214800 Sobic001G112900 Sobic001G112900 Sobic002G108500--Sobic001G112900 Sobic002G108500--Sobic006G036300 Sobic003G154400 Sobic003G154400 Sobic002G108500--Sobic003G154400 Sobic002G108500--Sobic004G267700 Sobic003G339200 Sobic003G339200 Sobic002G108500--Sobic003G339200 Sobic005G002400 Sobic005G002400 Sobic002G108500--Sobic005G002400 Sobic003G326000 Sobic003G326000 Sobic002G108500--Sobic003G326000
Octagon: transcription factors


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