Gene annotation
Transcriptome id Sobic.009G139200.1
Synonym DegP10, Sb09g020480
Functional annotation OsDegp7 - Putative Deg protease homologue, expressed
UniProt A0A1Z5R3S1
Pfam PF13180 PF13365
Panther DB PTHR22939 PTHR22939:SF87
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G36950 : DegP protease 10
RAP-DB (Rice) LOC_Os05g34460.1 : OsDegp7 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) Zm00025a043712
Brachypodium KQK06237 , PNT71253 , KQK06239 , PNT71254 , KQK06238
Barley HORVU1Hr1G064600.19 , HORVU1Hr1G064600.18 , HORVU1Hr1G064600.13 , HORVU1Hr1G064600.12 , HORVU1Hr1G064600.11 , HORVU1Hr1G064600.17 , HORVU1Hr1G064600.16 , HORVU1Hr1G064600.15 , HORVU1Hr1G064600.14 , HORVU1Hr1G064600.22 , HORVU1Hr1G064600.23 , HORVU1Hr1G064600.20 , HORVU1Hr1G064600.21 , HORVU1Hr1G064600.26 , HORVU1Hr1G064600.27 , HORVU1Hr1G064600.24 , HORVU1Hr1G064600.25 , HORVU1Hr1G064600.9 , HORVU1Hr1G064600.8 , HORVU1Hr1G064600.3 , HORVU1Hr1G064600.2 , HORVU1Hr1G064600.1 , HORVU1Hr1G064600.7 , HORVU1Hr1G064600.6 , HORVU1Hr1G064600.5 , HORVU1Hr1G064600.4 , HORVU1Hr1G064600.10
Wheat TraesCS1B02G270700 , TraesCS1A02G260200 , TraesCS1A02G260200 , TraesCS1D02G260100 , TraesCS1D02G260100
Populus -


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cDNA sequences
Sobic.009G139200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G078400 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
2 Sobic.009G205000 pentatricopeptide repeat protein PPR986-12, putative, expressed -
3 Sobic.002G279200 - -
4 Sobic.005G110550 - -
5 Sobic.005G024600 Rf1, mitochondrial precursor, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
6 Sobic.002G292400 - -
7 Sobic.007G013200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.002G358900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
9 Sobic.003G051300 expressed protein -
10 Sobic.006G053500 expressed protein K10990: RMI1, RecQ-mediated genome instability protein 1
11 Sobic.010G129900 expressed protein -
12 Sobic.003G049100 prolyl 4-hydroxylase, putative, expressed K00472: prolyl 4-hydroxylase
13 Sobic.002G213050 - -
14 Sobic.010G103000 expressed protein -
15 Sobic.005G199500 OsFBL58 - F-box domain and LRR containing protein, expressed -
16 Sobic.006G018500 - -
17 Sobic.007G075200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
18 Sobic.004G082200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
19 Sobic.003G399900 pentatricopeptide repeat protein PPR1106-17, putative, expressed -
20 Sobic.007G069750 - -


Gene co-expression network
sample Sobic009G139200 Sobic009G139200 Sobic004G078400 Sobic004G078400 Sobic009G139200--Sobic004G078400 Sobic009G205000 Sobic009G205000 Sobic009G139200--Sobic009G205000 Sobic002G279200 Sobic002G279200 Sobic009G139200--Sobic002G279200 Sobic005G110550 Sobic005G110550 Sobic009G139200--Sobic005G110550 Sobic005G024600 Sobic005G024600 Sobic009G139200--Sobic005G024600 Sobic002G292400 Sobic002G292400 Sobic009G139200--Sobic002G292400 Sobic007G013200 Sobic007G013200 Sobic009G139200--Sobic007G013200 Sobic002G358900 Sobic002G358900 Sobic009G139200--Sobic002G358900 Sobic003G051300 Sobic003G051300 Sobic009G139200--Sobic003G051300 Sobic010G103000 Sobic010G103000 Sobic004G078400--Sobic010G103000 Sobic010G129900 Sobic010G129900 Sobic004G078400--Sobic010G129900 Sobic003G188900 Sobic003G188900 Sobic004G078400--Sobic003G188900 Sobic007G069750 Sobic007G069750 Sobic004G078400--Sobic007G069750 Sobic005G199500 Sobic005G199500 Sobic004G078400--Sobic005G199500 Sobic001G112300 Sobic001G112300 Sobic004G078400--Sobic001G112300 Sobic002G213050 Sobic002G213050 Sobic004G078400--Sobic002G213050 Sobic001G221750 Sobic001G221750 Sobic004G078400--Sobic001G221750 Sobic004G055400 Sobic004G055400 Sobic004G078400--Sobic004G055400 Sobic009G205000--Sobic005G024600 Sobic001G477350 Sobic001G477350 Sobic009G205000--Sobic001G477350 Sobic009G205000--Sobic004G078400 Sobic007G172900 Sobic007G172900 Sobic009G205000--Sobic007G172900 Sobic006G123600 Sobic006G123600 Sobic009G205000--Sobic006G123600 Sobic009G205000--Sobic010G103000 Sobic010G046200 Sobic010G046200 Sobic009G205000--Sobic010G046200 Sobic009G205000--Sobic002G358900 Sobic009G066000 Sobic009G066000 Sobic009G205000--Sobic009G066000 Sobic005G008700 Sobic005G008700 Sobic002G279200--Sobic005G008700 Sobic006G053500 Sobic006G053500 Sobic002G279200--Sobic006G053500 Sobic003G049100 Sobic003G049100 Sobic002G279200--Sobic003G049100 Sobic004G082200 Sobic004G082200 Sobic002G279200--Sobic004G082200 Sobic009G147100 Sobic009G147100 Sobic002G279200--Sobic009G147100 Sobic010G262650 Sobic010G262650 Sobic002G279200--Sobic010G262650 Sobic001G530650 Sobic001G530650 Sobic002G279200--Sobic001G530650 Sobic001G497750 Sobic001G497750 Sobic002G279200--Sobic001G497750 Sobic001G543000 Sobic001G543000 Sobic002G279200--Sobic001G543000 Sobic005G110550--Sobic010G046200 Sobic005G110550--Sobic002G358900 Sobic005G110550--Sobic005G008700 Sobic003G399900 Sobic003G399900 Sobic005G110550--Sobic003G399900 Sobic003G089900 Sobic003G089900 Sobic005G110550--Sobic003G089900 Sobic005G110550--Sobic002G279200 Sobic001G001066 Sobic001G001066 Sobic005G110550--Sobic001G001066 Sobic003G162200 Sobic003G162200 Sobic005G110550--Sobic003G162200 Sobic006G115400 Sobic006G115400 Sobic005G110550--Sobic006G115400 Sobic005G024600--Sobic009G205000 Sobic003G303000 Sobic003G303000 Sobic005G024600--Sobic003G303000 Sobic008G072050 Sobic008G072050 Sobic005G024600--Sobic008G072050 Sobic005G024600--Sobic005G110550 Sobic007G202000 Sobic007G202000 Sobic005G024600--Sobic007G202000 Sobic004G041000 Sobic004G041000 Sobic005G024600--Sobic004G041000 Sobic005G024600--Sobic003G399900 Sobic010G202900 Sobic010G202900 Sobic005G024600--Sobic010G202900 Sobic005G024600--Sobic007G172900 Sobic007G183500 Sobic007G183500 Sobic002G292400--Sobic007G183500 Sobic001G205600 Sobic001G205600 Sobic002G292400--Sobic001G205600 Sobic005G026500 Sobic005G026500 Sobic002G292400--Sobic005G026500 Sobic006G223700 Sobic006G223700 Sobic002G292400--Sobic006G223700 Sobic003G318350 Sobic003G318350 Sobic002G292400--Sobic003G318350 Sobic004G149433 Sobic004G149433 Sobic002G292400--Sobic004G149433 Sobic001G423900 Sobic001G423900 Sobic002G292400--Sobic001G423900 Sobic007G003300 Sobic007G003300 Sobic002G292400--Sobic007G003300 Sobic003G088300 Sobic003G088300 Sobic002G292400--Sobic003G088300 Sobic007G013200--Sobic003G399900 Sobic003G433600 Sobic003G433600 Sobic007G013200--Sobic003G433600 Sobic007G013200--Sobic010G202900 Sobic007G013200--Sobic005G110550 Sobic007G013200--Sobic002G279200 Sobic007G013200--Sobic009G139200 Sobic007G013200--Sobic005G024600 Sobic007G013200--Sobic007G183500 Sobic003G203100 Sobic003G203100 Sobic007G013200--Sobic003G203100 Sobic002G358900--Sobic005G110550 Sobic002G037900 Sobic002G037900 Sobic002G358900--Sobic002G037900 Sobic004G199400 Sobic004G199400 Sobic002G358900--Sobic004G199400 Sobic001G491700 Sobic001G491700 Sobic002G358900--Sobic001G491700 Sobic002G358900--Sobic009G205000 Sobic002G358900--Sobic005G024600 Sobic006G085800 Sobic006G085800 Sobic002G358900--Sobic006G085800 Sobic010G123100 Sobic010G123100 Sobic002G358900--Sobic010G123100 Sobic002G358900--Sobic003G399900 Sobic003G051300--Sobic004G082200 Sobic007G075200 Sobic007G075200 Sobic003G051300--Sobic007G075200 Sobic007G154901 Sobic007G154901 Sobic003G051300--Sobic007G154901 Sobic003G051300--Sobic001G530650 Sobic003G051300--Sobic001G497750 Sobic007G005800 Sobic007G005800 Sobic003G051300--Sobic007G005800 Sobic003G051300--Sobic003G049100 Sobic003G091100 Sobic003G091100 Sobic003G051300--Sobic003G091100 Sobic006G018500 Sobic006G018500 Sobic003G051300--Sobic006G018500
Octagon: transcription factors


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