Gene annotation
Transcriptome id Sobic.009G161800.2,Sobic.009G161800.1,Sobic.009G161800.3
Synonym Sb09g022410, HAI2
Functional annotation protein phosphatase 2C, putative, expressed
UniProt A0A1B6P9B4 , A0A1B6P951
Pfam PF00481
Panther DB PTHR13832:SF337 PTHR13832 PTHR13832 PTHR13832:SF337
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K14497; protein phosphatase 2C
Gene Ontology GO:0004722; protein serine/threonine phosphatase activity GO:0006470protein dephosphorylation GO:0003824catalytic activity GO:0003824catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G07430 : highly ABA-induced PP2C gene 2
RAP-DB (Rice) LOC_Os01g62760.1,LOC_Os05g38290.2 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a028197 , Zm00025a039666 , Zm00025a038704 , Zm00025a055673
Brachypodium KQK17349 , KQK17350
Barley HORVU3Hr1G085930.2 , HORVU3Hr1G085930.3 , HORVU3Hr1G085930.1 , HORVU3Hr1G085930.6 , HORVU3Hr1G085930.4 , HORVU3Hr1G085930.5
Wheat TraesCS7D02G417600 , TraesCS7A02G423900 , TraesCS3A02G362200 , TraesCS7B02G326200 , TraesCS3B02G394600 , TraesCS3B02G394600 , TraesCS3D02G355900
Populus -


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cDNA sequences
Sobic.009G161800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G029300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
2 Sobic.010G231900 early nodulin 20 precursor, putative, expressed -
3 Sobic.002G075800 Up-reguralion under drought(PubMedID : 24916767)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
4 Sobic.004G170032 - -
5 Sobic.009G182400 circadian clock coupling factor ZGT, putative, expressed -
6 Sobic.003G064300 - -
7 Sobic.002G207100 - -
8 Sobic.007G143200 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
9 Sobic.004G309600 ABA signaling component(PubMedID : 24151305)@"Central regulator in ABA signaling, biosynthesis, and drought resistance in rice"(PubMedID : 30367619)@bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
10 Sobic.007G143100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
11 Sobic.003G378000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/LRR-repeat protein 2, putative, expressed K03875: SKP2, F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
12 Sobic.003G423300 RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
13 Sobic.009G064400 cytochrome P450 71A1, putative, expressed -
14 Sobic.003G198200 "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
15 Sobic.004G116300 expressed protein -
16 Sobic.003G198150 - -
17 Sobic.001G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
18 Sobic.001G140200 Homeobox domain containing protein, expressed -
19 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G424400 similar to Putative uncharacterized protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C


Gene co-expression network
sample Sobic009G161800 Sobic009G161800 Sobic008G029300 Sobic008G029300 Sobic009G161800--Sobic008G029300 Sobic010G231900 Sobic010G231900 Sobic009G161800--Sobic010G231900 Sobic002G075800 Sobic002G075800 Sobic009G161800--Sobic002G075800 Sobic004G170032 Sobic004G170032 Sobic009G161800--Sobic004G170032 Sobic009G182400 Sobic009G182400 Sobic009G161800--Sobic009G182400 Sobic003G064300 Sobic003G064300 Sobic009G161800--Sobic003G064300 Sobic002G207100 Sobic002G207100 Sobic009G161800--Sobic002G207100 Sobic007G143200 Sobic007G143200 Sobic009G161800--Sobic007G143200 Sobic004G309600 Sobic004G309600 Sobic009G161800--Sobic004G309600 Sobic008G029300--Sobic002G075800 Sobic003G198200 Sobic003G198200 Sobic008G029300--Sobic003G198200 Sobic008G029300--Sobic009G161800 Sobic008G029300--Sobic004G170032 Sobic003G198150 Sobic003G198150 Sobic008G029300--Sobic003G198150 Sobic003G378000 Sobic003G378000 Sobic008G029300--Sobic003G378000 Sobic002G148700 Sobic002G148700 Sobic008G029300--Sobic002G148700 Sobic002G193600 Sobic002G193600 Sobic008G029300--Sobic002G193600 Sobic002G173800 Sobic002G173800 Sobic008G029300--Sobic002G173800 Sobic010G231900--Sobic009G161800 Sobic010G231900--Sobic009G182400 Sobic010G231900--Sobic003G064300 Sobic010G231900--Sobic002G207100 Sobic006G272700 Sobic006G272700 Sobic010G231900--Sobic006G272700 Sobic009G064400 Sobic009G064400 Sobic010G231900--Sobic009G064400 Sobic007G143100 Sobic007G143100 Sobic010G231900--Sobic007G143100 Sobic008G040900 Sobic008G040900 Sobic010G231900--Sobic008G040900 Sobic010G231900--Sobic007G143200 Sobic009G136700 Sobic009G136700 Sobic002G075800--Sobic009G136700 Sobic002G075800--Sobic008G029300 Sobic002G075800--Sobic002G173800 Sobic003G356000 Sobic003G356000 Sobic002G075800--Sobic003G356000 Sobic002G075800--Sobic009G161800 Sobic003G131800 Sobic003G131800 Sobic002G075800--Sobic003G131800 Sobic002G164960 Sobic002G164960 Sobic002G075800--Sobic002G164960 Sobic008G087500 Sobic008G087500 Sobic002G075800--Sobic008G087500 Sobic006G183200 Sobic006G183200 Sobic002G075800--Sobic006G183200 Sobic002G110200 Sobic002G110200 Sobic004G170032--Sobic002G110200 Sobic002G182800 Sobic002G182800 Sobic004G170032--Sobic002G182800 Sobic009G128300 Sobic009G128300 Sobic004G170032--Sobic009G128300 Sobic002G331450 Sobic002G331450 Sobic004G170032--Sobic002G331450 Sobic001G075101 Sobic001G075101 Sobic004G170032--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic004G170032--Sobic007G169600 Sobic004G170032--Sobic003G198150 Sobic001G509400 Sobic001G509400 Sobic004G170032--Sobic001G509400 Sobic003G227600 Sobic003G227600 Sobic004G170032--Sobic003G227600 Sobic009G182400--Sobic010G231900 Sobic009G182400--Sobic009G161800 Sobic001G155300 Sobic001G155300 Sobic009G182400--Sobic001G155300 Sobic004G283550 Sobic004G283550 Sobic009G182400--Sobic004G283550 Sobic003G422200 Sobic003G422200 Sobic009G182400--Sobic003G422200 Sobic009G182400--Sobic004G309600 Sobic009G182400--Sobic009G064400 Sobic009G182400--Sobic003G064300 Sobic009G182400--Sobic007G143100 Sobic003G397400 Sobic003G397400 Sobic003G064300--Sobic003G397400 Sobic003G064300--Sobic007G143200 Sobic003G064300--Sobic007G143100 Sobic003G064300--Sobic002G207100 Sobic005G016900 Sobic005G016900 Sobic003G064300--Sobic005G016900 Sobic007G073750 Sobic007G073750 Sobic003G064300--Sobic007G073750 Sobic009G076700 Sobic009G076700 Sobic003G064300--Sobic009G076700 Sobic003G064300--Sobic006G272700 Sobic003G064300--Sobic009G064400 Sobic002G207100--Sobic003G064300 Sobic002G207100--Sobic007G143200 Sobic002G207100--Sobic007G143100 Sobic009G076500 Sobic009G076500 Sobic002G207100--Sobic009G076500 Sobic002G207100--Sobic009G076700 Sobic002G207100--Sobic007G073750 Sobic002G207100--Sobic003G397400 Sobic009G167000 Sobic009G167000 Sobic002G207100--Sobic009G167000 Sobic010G253500 Sobic010G253500 Sobic002G207100--Sobic010G253500 Sobic007G143200--Sobic007G143100 Sobic007G143200--Sobic005G016900 Sobic007G143200--Sobic007G073750 Sobic007G143200--Sobic009G076700 Sobic007G143200--Sobic003G397400 Sobic007G143200--Sobic007G169600 Sobic003G083000 Sobic003G083000 Sobic007G143200--Sobic003G083000 Sobic002G037400 Sobic002G037400 Sobic007G143200--Sobic002G037400 Sobic007G143200--Sobic001G075101 Sobic003G087100 Sobic003G087100 Sobic004G309600--Sobic003G087100 Sobic004G309600--Sobic002G110200 Sobic003G272400 Sobic003G272400 Sobic004G309600--Sobic003G272400 Sobic004G300300 Sobic004G300300 Sobic004G309600--Sobic004G300300 Sobic008G059000 Sobic008G059000 Sobic004G309600--Sobic008G059000 Sobic006G203000 Sobic006G203000 Sobic004G309600--Sobic006G203000 Sobic006G163900 Sobic006G163900 Sobic004G309600--Sobic006G163900 Sobic004G309600--Sobic003G422200 Sobic004G309600--Sobic002G037400
Octagon: transcription factors


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