Gene annotation
Transcriptome id Sobic.009G171200.2
Synonym Sb09g023230, SNX2a
Functional annotation PX domain containing protein, expressed
UniProt A0A1Z5R336
Pfam PF09325 PF00787
Panther DB PTHR10555 PTHR10555:SF146
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07120 : sorting nexin 2B
RAP-DB (Rice) LOC_Os05g39680.1 : PX domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043964 , Zm00025a048322 , Zm00025a037782
Brachypodium KQK10389 , KQK10388 , KQK10390 , PNT71064
Barley HORVU1Hr1G070330.20 , HORVU1Hr1G070330.9 , HORVU1Hr1G070330.18 , HORVU1Hr1G070330.19 , HORVU1Hr1G070330.11 , HORVU1Hr1G070330.16 , HORVU1Hr1G070330.17
Wheat TraesCS3B02G379800 , TraesCS1B02G307500 , TraesCS3A02G347900 , TraesCS1D02G293200 , TraesCS3D02G341500 , TraesCS1A02G298000
Populus -


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cDNA sequences
Sobic.009G171200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G210700 potassium transporter, putative, expressed -
2 Sobic.001G179200 expressed protein -
3 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
4 Sobic.002G313900 potassium transporter, putative, expressed -
5 Sobic.003G150900 protein transport protein-related, putative, expressed -
6 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
7 Sobic.003G199500 integral membrane protein, putative, expressed -
8 Sobic.007G018200 RNA recognition motif containing protein, putative, expressed -
9 Sobic.003G262400 expressed protein -
10 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
11 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
12 Sobic.003G212900 zinc ion binding protein, putative, expressed -
13 Sobic.006G224300 APO, putative, expressed -
14 Sobic.009G160600 Yip1 domain containing protein, expressed -
15 Sobic.002G292900 protein binding protein, putative, expressed -
16 Sobic.009G152100 G-box-binding factor 4, putative, expressed K14432: ABA responsive element binding factor
17 Sobic.005G114800 protein transport protein, putative, expressed K14007: protein transport protein SEC24
18 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
19 Sobic.005G197100 acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
20 Sobic.008G021000 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic009G171200 Sobic009G171200 Sobic006G210700 Sobic006G210700 Sobic009G171200--Sobic006G210700 Sobic001G179200 Sobic001G179200 Sobic009G171200--Sobic001G179200 Sobic009G166600 Sobic009G166600 Sobic009G171200--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic009G171200--Sobic002G313900 Sobic003G150900 Sobic003G150900 Sobic009G171200--Sobic003G150900 Sobic007G218600 Sobic007G218600 Sobic009G171200--Sobic007G218600 Sobic003G199500 Sobic003G199500 Sobic009G171200--Sobic003G199500 Sobic007G018200 Sobic007G018200 Sobic009G171200--Sobic007G018200 Sobic003G262400 Sobic003G262400 Sobic009G171200--Sobic003G262400 Sobic001G114200 Sobic001G114200 Sobic006G210700--Sobic001G114200 Sobic006G210700--Sobic009G166600 Sobic006G128100 Sobic006G128100 Sobic006G210700--Sobic006G128100 Sobic009G186700 Sobic009G186700 Sobic006G210700--Sobic009G186700 Sobic010G169900 Sobic010G169900 Sobic006G210700--Sobic010G169900 Sobic006G210700--Sobic002G313900 Sobic007G148400 Sobic007G148400 Sobic006G210700--Sobic007G148400 Sobic002G076500 Sobic002G076500 Sobic006G210700--Sobic002G076500 Sobic001G490900 Sobic001G490900 Sobic006G210700--Sobic001G490900 Sobic001G179200--Sobic001G114200 Sobic007G153500 Sobic007G153500 Sobic001G179200--Sobic007G153500 Sobic004G345400 Sobic004G345400 Sobic001G179200--Sobic004G345400 Sobic004G068100 Sobic004G068100 Sobic001G179200--Sobic004G068100 Sobic002G115500 Sobic002G115500 Sobic001G179200--Sobic002G115500 Sobic005G114800 Sobic005G114800 Sobic001G179200--Sobic005G114800 Sobic009G122500 Sobic009G122500 Sobic001G179200--Sobic009G122500 Sobic001G179200--Sobic006G210700 Sobic004G060300 Sobic004G060300 Sobic001G179200--Sobic004G060300 Sobic009G166600--Sobic002G313900 Sobic009G166600--Sobic005G114800 Sobic009G166600--Sobic006G210700 Sobic005G197100 Sobic005G197100 Sobic009G166600--Sobic005G197100 Sobic009G249700 Sobic009G249700 Sobic009G166600--Sobic009G249700 Sobic008G021000 Sobic008G021000 Sobic009G166600--Sobic008G021000 Sobic003G394200 Sobic003G394200 Sobic009G166600--Sobic003G394200 Sobic002G292900 Sobic002G292900 Sobic009G166600--Sobic002G292900 Sobic009G166600--Sobic006G128100 Sobic002G313900--Sobic009G166600 Sobic009G208100 Sobic009G208100 Sobic002G313900--Sobic009G208100 Sobic006G139100 Sobic006G139100 Sobic002G313900--Sobic006G139100 Sobic002G313900--Sobic002G292900 Sobic002G313900--Sobic006G210700 Sobic002G313900--Sobic008G021000 Sobic002G313900--Sobic009G249700 Sobic001G478800 Sobic001G478800 Sobic002G313900--Sobic001G478800 Sobic003G212900 Sobic003G212900 Sobic002G313900--Sobic003G212900 Sobic003G150900--Sobic005G114800 Sobic003G150900--Sobic009G166600 Sobic001G005600 Sobic001G005600 Sobic003G150900--Sobic001G005600 Sobic003G150900--Sobic006G139100 Sobic001G042200 Sobic001G042200 Sobic003G150900--Sobic001G042200 Sobic007G146600 Sobic007G146600 Sobic003G150900--Sobic007G146600 Sobic003G150900--Sobic008G021000 Sobic010G077500 Sobic010G077500 Sobic003G150900--Sobic010G077500 Sobic009G160600 Sobic009G160600 Sobic003G150900--Sobic009G160600 Sobic007G218600--Sobic009G186700 Sobic001G305900 Sobic001G305900 Sobic007G218600--Sobic001G305900 Sobic007G218600--Sobic007G148400 Sobic003G255700 Sobic003G255700 Sobic007G218600--Sobic003G255700 Sobic001G280500 Sobic001G280500 Sobic007G218600--Sobic001G280500 Sobic003G308300 Sobic003G308300 Sobic007G218600--Sobic003G308300 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic007G056100 Sobic007G056100 Sobic003G199500--Sobic007G056100 Sobic004G296700 Sobic004G296700 Sobic003G199500--Sobic004G296700 Sobic001G313500 Sobic001G313500 Sobic003G199500--Sobic001G313500 Sobic010G243400 Sobic010G243400 Sobic003G199500--Sobic010G243400 Sobic003G199500--Sobic009G160600 Sobic002G355800 Sobic002G355800 Sobic003G199500--Sobic002G355800 Sobic008G140400 Sobic008G140400 Sobic003G199500--Sobic008G140400 Sobic001G421400 Sobic001G421400 Sobic003G199500--Sobic001G421400 Sobic001G378200 Sobic001G378200 Sobic003G199500--Sobic001G378200 Sobic003G004500 Sobic003G004500 Sobic007G018200--Sobic003G004500 Sobic001G517500 Sobic001G517500 Sobic007G018200--Sobic001G517500 Sobic007G018200--Sobic001G005600 Sobic004G160700 Sobic004G160700 Sobic007G018200--Sobic004G160700 Sobic007G046200 Sobic007G046200 Sobic007G018200--Sobic007G046200 Sobic004G068500 Sobic004G068500 Sobic007G018200--Sobic004G068500 Sobic004G180900 Sobic004G180900 Sobic007G018200--Sobic004G180900 Sobic002G277300 Sobic002G277300 Sobic007G018200--Sobic002G277300 Sobic008G160500 Sobic008G160500 Sobic007G018200--Sobic008G160500 Sobic003G432800 Sobic003G432800 Sobic003G262400--Sobic003G432800 Sobic003G262400--Sobic009G171200 Sobic004G084400 Sobic004G084400 Sobic003G262400--Sobic004G084400 Sobic003G120700 Sobic003G120700 Sobic003G262400--Sobic003G120700 Sobic001G017200 Sobic001G017200 Sobic003G262400--Sobic001G017200 Sobic003G262400--Sobic002G076500 Sobic009G199500 Sobic009G199500 Sobic003G262400--Sobic009G199500 Sobic002G056900 Sobic002G056900 Sobic003G262400--Sobic002G056900 Sobic006G112500 Sobic006G112500 Sobic003G262400--Sobic006G112500
Octagon: transcription factors


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