Gene annotation
Transcriptome id Sobic.009G174400.9,Sobic.009G174400.3,Sobic.009G174400.6,Sobic.009G174400.4,Sobic.009G174400.5,Sobic.009G174400.8,Sobic.009G174400.7
Synonym Sb09g023510
Functional annotation expressed protein
UniProt A0A1Z5R429 , A0A1Z5R3T9 , C5YZT2
Pfam PF11331
Panther DB PTHR31105 PTHR31105:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05190 : Protein of unknown function (DUF3133)
RAP-DB (Rice) LOC_Os05g40170.1 : expressed protein
MaizeGDB (Corn) Zm00025a043999
Brachypodium -
Barley HORVU1Hr1G069570.2
Wheat TraesCS1D02G301000 , TraesCS1B02G311100 , TraesCS1A02G301300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G001600 Leucine Rich Repeat family protein, expressed -
2 Sobic.004G319500 heat shock protein DnaJ, putative, expressed -
3 Sobic.003G201800 coiled-coil domain-containing protein, putative, expressed -
4 Sobic.006G057300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@leucoanthocyanidin dioxygenase, putative, expressed -
5 Sobic.010G120350 - -
6 Sobic.001G223000 cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
7 Sobic.002G382400 - -
8 Sobic.003G380100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@pentatricopeptide, putative, expressed -
9 Sobic.008G010700 RGH1A, putative, expressed -
10 Sobic.004G101100 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
11 Sobic.001G439050 - -
12 Sobic.009G055000 - -
13 Sobic.009G020200 NBS-LRR type disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.010G025200 RNA recognition motif containing protein, putative, expressed -
15 Sobic.003G056900 expressed protein -
16 Sobic.007G180800 - -
17 Sobic.001G148800 hsp20/alpha crystallin family protein, putative, expressed -
18 Sobic.004G072400 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.010G057250 - -
20 Sobic.002G249400 auxin efflux carrier component, putative, expressed -


Gene co-expression network
sample Sobic009G174400 Sobic009G174400 Sobic006G001600 Sobic006G001600 Sobic009G174400--Sobic006G001600 Sobic004G319500 Sobic004G319500 Sobic009G174400--Sobic004G319500 Sobic003G201800 Sobic003G201800 Sobic009G174400--Sobic003G201800 Sobic006G057300 Sobic006G057300 Sobic009G174400--Sobic006G057300 Sobic010G120350 Sobic010G120350 Sobic009G174400--Sobic010G120350 Sobic001G223000 Sobic001G223000 Sobic009G174400--Sobic001G223000 Sobic002G382400 Sobic002G382400 Sobic009G174400--Sobic002G382400 Sobic003G380100 Sobic003G380100 Sobic009G174400--Sobic003G380100 Sobic008G010700 Sobic008G010700 Sobic009G174400--Sobic008G010700 Sobic006G001600--Sobic004G319500 Sobic006G001600--Sobic003G201800 Sobic006G001600--Sobic010G120350 Sobic003G056900 Sobic003G056900 Sobic006G001600--Sobic003G056900 Sobic001G439050 Sobic001G439050 Sobic006G001600--Sobic001G439050 Sobic006G001600--Sobic002G382400 Sobic003G115266 Sobic003G115266 Sobic006G001600--Sobic003G115266 Sobic002G011200 Sobic002G011200 Sobic006G001600--Sobic002G011200 Sobic007G180800 Sobic007G180800 Sobic006G001600--Sobic007G180800 Sobic004G319500--Sobic010G120350 Sobic004G319500--Sobic001G439050 Sobic004G319500--Sobic002G382400 Sobic004G319500--Sobic006G001600 Sobic004G319500--Sobic003G201800 Sobic001G080500 Sobic001G080500 Sobic004G319500--Sobic001G080500 Sobic004G319500--Sobic003G056900 Sobic002G249400 Sobic002G249400 Sobic004G319500--Sobic002G249400 Sobic004G319500--Sobic007G180800 Sobic003G201800--Sobic002G382400 Sobic003G201800--Sobic010G120350 Sobic003G201800--Sobic002G249400 Sobic010G025200 Sobic010G025200 Sobic003G201800--Sobic010G025200 Sobic003G201800--Sobic001G223000 Sobic003G201800--Sobic004G319500 Sobic003G201800--Sobic006G001600 Sobic003G201800--Sobic003G056900 Sobic003G201800--Sobic007G180800 Sobic002G122900 Sobic002G122900 Sobic006G057300--Sobic002G122900 Sobic004G101100 Sobic004G101100 Sobic006G057300--Sobic004G101100 Sobic001G285700 Sobic001G285700 Sobic006G057300--Sobic001G285700 Sobic006G035950 Sobic006G035950 Sobic006G057300--Sobic006G035950 Sobic001G121000 Sobic001G121000 Sobic006G057300--Sobic001G121000 Sobic006G246800 Sobic006G246800 Sobic006G057300--Sobic006G246800 Sobic004G355101 Sobic004G355101 Sobic006G057300--Sobic004G355101 Sobic010G228300 Sobic010G228300 Sobic006G057300--Sobic010G228300 Sobic007G215300 Sobic007G215300 Sobic006G057300--Sobic007G215300 Sobic010G120350--Sobic004G319500 Sobic010G120350--Sobic003G201800 Sobic010G120350--Sobic002G382400 Sobic010G120350--Sobic002G249400 Sobic010G120350--Sobic006G001600 Sobic003G236501 Sobic003G236501 Sobic010G120350--Sobic003G236501 Sobic004G342700 Sobic004G342700 Sobic010G120350--Sobic004G342700 Sobic010G120350--Sobic006G246800 Sobic008G176401 Sobic008G176401 Sobic010G120350--Sobic008G176401 Sobic001G223000--Sobic010G025200 Sobic006G102600 Sobic006G102600 Sobic001G223000--Sobic006G102600 Sobic006G077100 Sobic006G077100 Sobic001G223000--Sobic006G077100 Sobic003G323750 Sobic003G323750 Sobic001G223000--Sobic003G323750 Sobic006G077900 Sobic006G077900 Sobic001G223000--Sobic006G077900 Sobic001G223000--Sobic003G201800 Sobic006G138700 Sobic006G138700 Sobic001G223000--Sobic006G138700 Sobic007G139800 Sobic007G139800 Sobic001G223000--Sobic007G139800 Sobic002G277366 Sobic002G277366 Sobic001G223000--Sobic002G277366 Sobic002G382400--Sobic003G201800 Sobic002G382400--Sobic001G439050 Sobic002G382400--Sobic010G120350 Sobic002G382400--Sobic004G319500 Sobic002G382400--Sobic003G236501 Sobic007G107900 Sobic007G107900 Sobic002G382400--Sobic007G107900 Sobic002G382400--Sobic003G056900 Sobic006G082100 Sobic006G082100 Sobic002G382400--Sobic006G082100 Sobic002G382400--Sobic006G001600 Sobic009G124850 Sobic009G124850 Sobic003G380100--Sobic009G124850 Sobic010G064300 Sobic010G064300 Sobic003G380100--Sobic010G064300 Sobic001G516400 Sobic001G516400 Sobic003G380100--Sobic001G516400 Sobic002G094100 Sobic002G094100 Sobic003G380100--Sobic002G094100 Sobic009G247200 Sobic009G247200 Sobic003G380100--Sobic009G247200 Sobic009G134700 Sobic009G134700 Sobic003G380100--Sobic009G134700 Sobic003G142500 Sobic003G142500 Sobic003G380100--Sobic003G142500 Sobic008G193000 Sobic008G193000 Sobic003G380100--Sobic008G193000 Sobic005G168900 Sobic005G168900 Sobic003G380100--Sobic005G168900 Sobic001G392000 Sobic001G392000 Sobic008G010700--Sobic001G392000 Sobic001G303600 Sobic001G303600 Sobic008G010700--Sobic001G303600 Sobic004G072400 Sobic004G072400 Sobic008G010700--Sobic004G072400 Sobic004G126200 Sobic004G126200 Sobic008G010700--Sobic004G126200 Sobic008G010700--Sobic004G101100 Sobic001G160400 Sobic001G160400 Sobic008G010700--Sobic001G160400 Sobic003G238200 Sobic003G238200 Sobic008G010700--Sobic003G238200 Sobic004G012200 Sobic004G012200 Sobic008G010700--Sobic004G012200 Sobic005G219900 Sobic005G219900 Sobic008G010700--Sobic005G219900
Octagon: transcription factors


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