Gene annotation
Transcriptome id Sobic.009G204700.1
Synonym Sb09g026160
Functional annotation light repressible receptor protein kinase, putative, expressed
UniProt A0A1Z5R3J1
Pfam PF13855 PF07714 PF12819
Panther DB PTHR27003 PTHR27003:SF49
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G29990 : Leucine-rich repeat transmembrane protein kinase protein
RAP-DB (Rice) LOC_Os05g44990.1 : light repressible receptor protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a018228 , Zm00025a004542 , Zm00025a014170 , Zm00025a044010 , Zm00025a016933 , Zm00025a044001 , Zm00025a044003
Brachypodium KQK17286 , KQK21008 , KQJ85665 , KQK08005 , KQJ86007 , KQK06744 , KQK00402 , PNT73415
Barley HORVU3Hr1G068540.2 , HORVU3Hr1G068540.3 , HORVU3Hr1G068540.6 , HORVU3Hr1G068540.7 , HORVU3Hr1G068540.4 , HORVU5Hr1G016730.6 , HORVU5Hr1G016730.7 , HORVU5Hr1G016730.2 , HORVU5Hr1G016730.3 , HORVU1Hr1G077200.3 , HORVU1Hr1G077200.2 , HORVU1Hr1G077200.1 , HORVU5Hr1G016730.11 , HORVU5Hr1G016730.12 , HORVU5Hr1G016730.13 , HORVU7Hr1G099520.1 , HORVU7Hr1G099520.2 , HORVU7Hr1G099520.3 , HORVU1Hr1G078280.10 , HORVU1Hr1G078280.11 , HORVU1Hr1G078280.12 , HORVU1Hr1G078280.13 , HORVU5Hr1G016730.8 , HORVU5Hr1G016730.9 , HORVU5Hr1G016730.14 , HORVU1Hr1G078280.6 , HORVU1Hr1G078280.7 , HORVU1Hr1G078280.4 , HORVU1Hr1G078280.5 , HORVU1Hr1G078280.2 , HORVU1Hr1G078280.3 , HORVU1Hr1G078280.1 , HORVU1Hr1G078280.8 , HORVU1Hr1G078280.9 , HORVU1Hr1G078300.3 , HORVU1Hr1G078300.2 , HORVU1Hr1G078300.1 , HORVU1Hr1G078300.6 , HORVU1Hr1G078300.5 , HORVU1Hr1G078300.4 , HORVU0Hr1G022070.1
Wheat TraesCS1A02G345700 , TraesCS1A02G345700 , TraesCS1B02G359300 , TraesCS1B02G359300 , TraesCS3D02G286200 , TraesCS3A02G286500 , TraesCS1D02G348200 , TraesCS1D02G348200 , TraesCS1D02G348200 , TraesCS3B02G320700 , TraesCS1D02G348000 , TraesCS1B02G359400 , TraesCS1B02G359400 , TraesCS5D02G073900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G267400 basic helix-loop-helix, putative, expressed -
2 Sobic.003G069601 - -
3 Sobic.006G045601 - -
4 Sobic.001G100300 - -
5 Sobic.009G216200 - -
6 Sobic.009G173700 expansin precursor, putative, expressed -
7 Sobic.003G433000 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.002G374000 - -
9 Sobic.009G235400 - -
10 Sobic.006G221500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed -
11 Sobic.002G377501 - -
12 Sobic.006G136300 - -
13 Sobic.008G142500 Leucine Rich Repeat family protein, expressed -
14 Sobic.005G228650 - -
15 Sobic.008G141700 heparanase-like protein precursor, putative, expressed K07964: heparanase
16 Sobic.006G235801 - -
17 Sobic.006G165200 amino acid permease family protein, putative, expressed -
18 Sobic.007G183600 expressed protein -
19 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
20 Sobic.004G072201 - -


Gene co-expression network
sample Sobic009G204700 Sobic009G204700 Sobic004G267400 Sobic004G267400 Sobic009G204700--Sobic004G267400 Sobic003G069601 Sobic003G069601 Sobic009G204700--Sobic003G069601 Sobic006G045601 Sobic006G045601 Sobic009G204700--Sobic006G045601 Sobic001G100300 Sobic001G100300 Sobic009G204700--Sobic001G100300 Sobic009G216200 Sobic009G216200 Sobic009G204700--Sobic009G216200 Sobic009G173700 Sobic009G173700 Sobic009G204700--Sobic009G173700 Sobic003G433000 Sobic003G433000 Sobic009G204700--Sobic003G433000 Sobic002G374000 Sobic002G374000 Sobic009G204700--Sobic002G374000 Sobic009G235400 Sobic009G235400 Sobic009G204700--Sobic009G235400 Sobic004G068600 Sobic004G068600 Sobic004G267400--Sobic004G068600 Sobic001G052700 Sobic001G052700 Sobic004G267400--Sobic001G052700 Sobic006G136300 Sobic006G136300 Sobic004G267400--Sobic006G136300 Sobic004G267400--Sobic002G374000 Sobic006G221500 Sobic006G221500 Sobic004G267400--Sobic006G221500 Sobic007G183600 Sobic007G183600 Sobic004G267400--Sobic007G183600 Sobic004G315400 Sobic004G315400 Sobic004G267400--Sobic004G315400 Sobic004G267400--Sobic003G069601 Sobic005G228650 Sobic005G228650 Sobic004G267400--Sobic005G228650 Sobic003G069601--Sobic007G183600 Sobic001G261452 Sobic001G261452 Sobic003G069601--Sobic001G261452 Sobic003G069601--Sobic002G374000 Sobic004G072201 Sobic004G072201 Sobic003G069601--Sobic004G072201 Sobic008G046700 Sobic008G046700 Sobic003G069601--Sobic008G046700 Sobic003G069601--Sobic006G045601 Sobic006G255200 Sobic006G255200 Sobic003G069601--Sobic006G255200 Sobic001G442000 Sobic001G442000 Sobic003G069601--Sobic001G442000 Sobic002G127300 Sobic002G127300 Sobic003G069601--Sobic002G127300 Sobic006G045601--Sobic009G235400 Sobic006G045601--Sobic002G374000 Sobic006G045601--Sobic003G069601 Sobic006G045601--Sobic001G100300 Sobic004G093700 Sobic004G093700 Sobic006G045601--Sobic004G093700 Sobic006G045601--Sobic007G183600 Sobic006G235801 Sobic006G235801 Sobic006G045601--Sobic006G235801 Sobic006G045601--Sobic004G072201 Sobic010G054700 Sobic010G054700 Sobic006G045601--Sobic010G054700 Sobic001G100300--Sobic009G173700 Sobic010G100600 Sobic010G100600 Sobic001G100300--Sobic010G100600 Sobic001G100300--Sobic009G235400 Sobic010G235100 Sobic010G235100 Sobic001G100300--Sobic010G235100 Sobic007G149500 Sobic007G149500 Sobic001G100300--Sobic007G149500 Sobic001G100300--Sobic006G235801 Sobic001G100300--Sobic006G045601 Sobic005G118800 Sobic005G118800 Sobic001G100300--Sobic005G118800 Sobic006G121950 Sobic006G121950 Sobic001G100300--Sobic006G121950 Sobic003G443601 Sobic003G443601 Sobic009G216200--Sobic003G443601 Sobic005G131500 Sobic005G131500 Sobic009G216200--Sobic005G131500 Sobic002G377501 Sobic002G377501 Sobic009G216200--Sobic002G377501 Sobic009G216200--Sobic009G204700 Sobic002G259900 Sobic002G259900 Sobic009G216200--Sobic002G259900 Sobic006G089266 Sobic006G089266 Sobic009G216200--Sobic006G089266 Sobic006G085601 Sobic006G085601 Sobic009G216200--Sobic006G085601 Sobic009G216200--Sobic004G267400 Sobic009G216200--Sobic003G433000 Sobic005G187700 Sobic005G187700 Sobic009G173700--Sobic005G187700 Sobic001G014600 Sobic001G014600 Sobic009G173700--Sobic001G014600 Sobic009G173700--Sobic006G221500 Sobic008G142500 Sobic008G142500 Sobic009G173700--Sobic008G142500 Sobic009G173700--Sobic001G100300 Sobic009G173700--Sobic006G235801 Sobic003G341900 Sobic003G341900 Sobic009G173700--Sobic003G341900 Sobic009G173700--Sobic007G149500 Sobic007G042700 Sobic007G042700 Sobic009G173700--Sobic007G042700 Sobic004G267650 Sobic004G267650 Sobic003G433000--Sobic004G267650 Sobic003G433000--Sobic003G069601 Sobic003G433000--Sobic008G046700 Sobic006G280250 Sobic006G280250 Sobic003G433000--Sobic006G280250 Sobic001G174100 Sobic001G174100 Sobic003G433000--Sobic001G174100 Sobic002G046150 Sobic002G046150 Sobic003G433000--Sobic002G046150 Sobic003G433000--Sobic002G374000 Sobic003G433000--Sobic004G267400 Sobic010G105900 Sobic010G105900 Sobic003G433000--Sobic010G105900 Sobic002G374000--Sobic004G072201 Sobic001G109400 Sobic001G109400 Sobic002G374000--Sobic001G109400 Sobic002G374000--Sobic004G315400 Sobic001G212900 Sobic001G212900 Sobic002G374000--Sobic001G212900 Sobic001G383200 Sobic001G383200 Sobic002G374000--Sobic001G383200 Sobic004G127600 Sobic004G127600 Sobic002G374000--Sobic004G127600 Sobic002G374000--Sobic007G183600 Sobic002G374000--Sobic003G069601 Sobic010G012200 Sobic010G012200 Sobic002G374000--Sobic010G012200 Sobic009G235400--Sobic006G045601 Sobic009G235400--Sobic001G100300 Sobic003G174500 Sobic003G174500 Sobic009G235400--Sobic003G174500 Sobic009G235400--Sobic001G261452 Sobic009G186300 Sobic009G186300 Sobic009G235400--Sobic009G186300 Sobic009G235400--Sobic005G118800 Sobic009G235400--Sobic004G093700 Sobic010G129100 Sobic010G129100 Sobic009G235400--Sobic010G129100 Sobic010G195000 Sobic010G195000 Sobic009G235400--Sobic010G195000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.