Gene annotation
Transcriptome id Sobic.009G217800.1
Synonym
Functional annotation -
UniProt A0A1B6PA28
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G180200 NC domain-containing protein, putative, expressed -
2 Sobic.002G360500 expressed protein -
3 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
4 Sobic.003G307200 expressed protein -
5 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
6 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
7 Sobic.001G393200 expressed protein -
8 Sobic.002G417000 expressed protein -
9 Sobic.010G014500 aspartic protease, putative, expressed -
10 Sobic.001G518000 protein kinase, putative, expressed -
11 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
12 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.001G155700 expansin precursor, putative, expressed -
14 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
15 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
17 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
18 Sobic.001G493900 beta-galactosidase, putative, expressed -
19 Sobic.008G093600 expressed protein -
20 Sobic.003G230000 serine/threonine-protein kinase, putative, expressed -


Gene co-expression network
sample Sobic009G217800 Sobic009G217800 Sobic007G180200 Sobic007G180200 Sobic009G217800--Sobic007G180200 Sobic002G360500 Sobic002G360500 Sobic009G217800--Sobic002G360500 Sobic010G235300 Sobic010G235300 Sobic009G217800--Sobic010G235300 Sobic003G307200 Sobic003G307200 Sobic009G217800--Sobic003G307200 Sobic007G165800 Sobic007G165800 Sobic009G217800--Sobic007G165800 Sobic001G299600 Sobic001G299600 Sobic009G217800--Sobic001G299600 Sobic001G393200 Sobic001G393200 Sobic009G217800--Sobic001G393200 Sobic002G417000 Sobic002G417000 Sobic009G217800--Sobic002G417000 Sobic010G014500 Sobic010G014500 Sobic009G217800--Sobic010G014500 Sobic005G199700 Sobic005G199700 Sobic007G180200--Sobic005G199700 Sobic007G180200--Sobic007G165800 Sobic007G180200--Sobic001G299600 Sobic003G338700 Sobic003G338700 Sobic007G180200--Sobic003G338700 Sobic003G027100 Sobic003G027100 Sobic007G180200--Sobic003G027100 Sobic009G146700 Sobic009G146700 Sobic007G180200--Sobic009G146700 Sobic001G199400 Sobic001G199400 Sobic007G180200--Sobic001G199400 Sobic010G014700 Sobic010G014700 Sobic007G180200--Sobic010G014700 Sobic007G180200--Sobic010G235300 Sobic002G360500--Sobic002G417000 Sobic001G518000 Sobic001G518000 Sobic002G360500--Sobic001G518000 Sobic002G360500--Sobic003G307200 Sobic001G493900 Sobic001G493900 Sobic002G360500--Sobic001G493900 Sobic004G003700 Sobic004G003700 Sobic002G360500--Sobic004G003700 Sobic010G211800 Sobic010G211800 Sobic002G360500--Sobic010G211800 Sobic008G114900 Sobic008G114900 Sobic002G360500--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic002G360500--Sobic001G155700 Sobic008G006800 Sobic008G006800 Sobic002G360500--Sobic008G006800 Sobic001G286700 Sobic001G286700 Sobic010G235300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic010G235300--Sobic005G009600 Sobic006G273600 Sobic006G273600 Sobic010G235300--Sobic006G273600 Sobic010G235300--Sobic003G027100 Sobic007G170100 Sobic007G170100 Sobic010G235300--Sobic007G170100 Sobic010G235300--Sobic007G165800 Sobic010G166300 Sobic010G166300 Sobic010G235300--Sobic010G166300 Sobic003G178500 Sobic003G178500 Sobic010G235300--Sobic003G178500 Sobic002G363300 Sobic002G363300 Sobic010G235300--Sobic002G363300 Sobic002G319300 Sobic002G319300 Sobic003G307200--Sobic002G319300 Sobic003G307200--Sobic002G360500 Sobic003G307200--Sobic001G493900 Sobic003G307200--Sobic002G417000 Sobic003G307200--Sobic001G155700 Sobic006G221800 Sobic006G221800 Sobic003G307200--Sobic006G221800 Sobic002G074000 Sobic002G074000 Sobic003G307200--Sobic002G074000 Sobic003G307200--Sobic001G518000 Sobic001G379900 Sobic001G379900 Sobic003G307200--Sobic001G379900 Sobic004G274600 Sobic004G274600 Sobic007G165800--Sobic004G274600 Sobic001G434100 Sobic001G434100 Sobic007G165800--Sobic001G434100 Sobic007G165800--Sobic007G180200 Sobic007G165800--Sobic001G286700 Sobic007G165800--Sobic003G027100 Sobic007G165800--Sobic010G235300 Sobic007G165800--Sobic001G199400 Sobic007G165800--Sobic007G170100 Sobic007G165800--Sobic003G338700 Sobic001G299600--Sobic007G180200 Sobic001G299600--Sobic010G014500 Sobic001G488900 Sobic001G488900 Sobic001G299600--Sobic001G488900 Sobic001G299600--Sobic003G338700 Sobic001G299600--Sobic005G199700 Sobic001G299600--Sobic001G199400 Sobic001G299600--Sobic001G155700 Sobic001G299600--Sobic007G165800 Sobic001G299600--Sobic001G493900 Sobic010G168700 Sobic010G168700 Sobic001G393200--Sobic010G168700 Sobic009G047500 Sobic009G047500 Sobic001G393200--Sobic009G047500 Sobic005G168400 Sobic005G168400 Sobic001G393200--Sobic005G168400 Sobic008G125700 Sobic008G125700 Sobic001G393200--Sobic008G125700 Sobic001G393200--Sobic002G360500 Sobic001G347201 Sobic001G347201 Sobic001G393200--Sobic001G347201 Sobic001G393200--Sobic005G199700 Sobic010G119300 Sobic010G119300 Sobic001G393200--Sobic010G119300 Sobic001G393200--Sobic007G180200 Sobic002G417000--Sobic002G360500 Sobic002G417000--Sobic001G493900 Sobic004G267600 Sobic004G267600 Sobic002G417000--Sobic004G267600 Sobic002G417000--Sobic003G307200 Sobic002G417000--Sobic008G114900 Sobic002G417000--Sobic010G211800 Sobic010G192500 Sobic010G192500 Sobic002G417000--Sobic010G192500 Sobic002G417000--Sobic002G074000 Sobic002G417000--Sobic006G221800 Sobic010G014500--Sobic003G338700 Sobic010G077000 Sobic010G077000 Sobic010G014500--Sobic010G077000 Sobic010G014500--Sobic005G199700 Sobic003G019900 Sobic003G019900 Sobic010G014500--Sobic003G019900 Sobic010G014500--Sobic010G014700 Sobic010G014500--Sobic009G146700 Sobic010G014500--Sobic001G299600 Sobic010G014500--Sobic007G165800 Sobic010G014500--Sobic007G180200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.