Gene annotation
Transcriptome id Sobic.010G025000.1
Synonym ATASY1, ASY1
Functional annotation meiotic asynaptic mutant 1, putative, expressed
UniProt C5Z3F0
Pfam PF02301
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67370 : DNA-binding HORMA family protein
RAP-DB (Rice) LOC_Os12g41350.1 : meiotic asynaptic mutant 1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5B02G285800 , TraesCS5A02G286500 , TraesCS5A02G304300 , TraesCS5D02G294100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G370300 GPI transamidase subunit PIG-U domain containing protein, expressed K10879: DNA-repair protein XRCC2
2 Sobic.004G336100 ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
3 Sobic.003G188600 expressed protein -
4 Sobic.005G166500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@allergen-related, putative, expressed -
5 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
6 Sobic.009G156400 tubulin-specific chaperone E, putative, expressed -
7 Sobic.010G030000 leucine rich repeat protein, putative, expressed -
8 Sobic.008G070700 leafbladeless1, putative, expressed -
9 Sobic.007G096800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
10 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
11 Sobic.007G121600 - -
12 Sobic.004G328300 expressed protein -
13 Sobic.007G184100 expressed protein -
14 Sobic.001G191900 mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
15 Sobic.007G121650 - -
16 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.010G222800 expressed protein -
18 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
19 Sobic.002G173400 expressed protein -
20 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -


Gene co-expression network
sample Sobic010G025000 Sobic010G025000 Sobic003G370300 Sobic003G370300 Sobic010G025000--Sobic003G370300 Sobic004G336100 Sobic004G336100 Sobic010G025000--Sobic004G336100 Sobic003G188600 Sobic003G188600 Sobic010G025000--Sobic003G188600 Sobic005G166500 Sobic005G166500 Sobic010G025000--Sobic005G166500 Sobic002G317700 Sobic002G317700 Sobic010G025000--Sobic002G317700 Sobic009G156400 Sobic009G156400 Sobic010G025000--Sobic009G156400 Sobic010G030000 Sobic010G030000 Sobic010G025000--Sobic010G030000 Sobic008G070700 Sobic008G070700 Sobic010G025000--Sobic008G070700 Sobic007G096800 Sobic007G096800 Sobic010G025000--Sobic007G096800 Sobic002G021200 Sobic002G021200 Sobic003G370300--Sobic002G021200 Sobic002G112000 Sobic002G112000 Sobic003G370300--Sobic002G112000 Sobic010G250400 Sobic010G250400 Sobic003G370300--Sobic010G250400 Sobic003G129500 Sobic003G129500 Sobic003G370300--Sobic003G129500 Sobic005G153000 Sobic005G153000 Sobic003G370300--Sobic005G153000 Sobic007G121600 Sobic007G121600 Sobic003G370300--Sobic007G121600 Sobic003G370300--Sobic002G317700 Sobic001G377700 Sobic001G377700 Sobic003G370300--Sobic001G377700 Sobic001G054700 Sobic001G054700 Sobic003G370300--Sobic001G054700 Sobic006G179300 Sobic006G179300 Sobic004G336100--Sobic006G179300 Sobic004G336100--Sobic010G025000 Sobic003G223900 Sobic003G223900 Sobic004G336100--Sobic003G223900 Sobic001G217300 Sobic001G217300 Sobic004G336100--Sobic001G217300 Sobic004G277400 Sobic004G277400 Sobic004G336100--Sobic004G277400 Sobic005G125000 Sobic005G125000 Sobic004G336100--Sobic005G125000 Sobic003G360300 Sobic003G360300 Sobic004G336100--Sobic003G360300 Sobic003G356300 Sobic003G356300 Sobic004G336100--Sobic003G356300 Sobic002G203500 Sobic002G203500 Sobic004G336100--Sobic002G203500 Sobic001G242500 Sobic001G242500 Sobic003G188600--Sobic001G242500 Sobic003G188600--Sobic002G112000 Sobic003G188600--Sobic003G370300 Sobic003G188600--Sobic002G317700 Sobic003G259300 Sobic003G259300 Sobic003G188600--Sobic003G259300 Sobic007G121650 Sobic007G121650 Sobic003G188600--Sobic007G121650 Sobic008G063600 Sobic008G063600 Sobic003G188600--Sobic008G063600 Sobic002G335500 Sobic002G335500 Sobic003G188600--Sobic002G335500 Sobic004G078500 Sobic004G078500 Sobic003G188600--Sobic004G078500 Sobic005G166500--Sobic008G070700 Sobic009G099150 Sobic009G099150 Sobic005G166500--Sobic009G099150 Sobic007G084200 Sobic007G084200 Sobic005G166500--Sobic007G084200 Sobic005G166500--Sobic002G317700 Sobic010G092400 Sobic010G092400 Sobic005G166500--Sobic010G092400 Sobic007G087800 Sobic007G087800 Sobic005G166500--Sobic007G087800 Sobic009G219500 Sobic009G219500 Sobic005G166500--Sobic009G219500 Sobic006G014400 Sobic006G014400 Sobic005G166500--Sobic006G014400 Sobic006G163300 Sobic006G163300 Sobic005G166500--Sobic006G163300 Sobic002G317700--Sobic002G112000 Sobic002G317700--Sobic010G092400 Sobic002G317700--Sobic008G070700 Sobic004G267600 Sobic004G267600 Sobic002G317700--Sobic004G267600 Sobic006G274200 Sobic006G274200 Sobic002G317700--Sobic006G274200 Sobic009G202801 Sobic009G202801 Sobic002G317700--Sobic009G202801 Sobic006G211900 Sobic006G211900 Sobic002G317700--Sobic006G211900 Sobic004G234500 Sobic004G234500 Sobic002G317700--Sobic004G234500 Sobic007G188001 Sobic007G188001 Sobic002G317700--Sobic007G188001 Sobic009G156400--Sobic002G317700 Sobic009G156400--Sobic006G211900 Sobic008G118100 Sobic008G118100 Sobic009G156400--Sobic008G118100 Sobic009G156400--Sobic002G112000 Sobic003G198016 Sobic003G198016 Sobic009G156400--Sobic003G198016 Sobic001G033300 Sobic001G033300 Sobic009G156400--Sobic001G033300 Sobic010G175350 Sobic010G175350 Sobic009G156400--Sobic010G175350 Sobic003G198048 Sobic003G198048 Sobic009G156400--Sobic003G198048 Sobic009G156400--Sobic004G078500 Sobic010G038200 Sobic010G038200 Sobic010G030000--Sobic010G038200 Sobic009G136000 Sobic009G136000 Sobic010G030000--Sobic009G136000 Sobic008G131900 Sobic008G131900 Sobic010G030000--Sobic008G131900 Sobic010G009700 Sobic010G009700 Sobic010G030000--Sobic010G009700 Sobic010G243100 Sobic010G243100 Sobic010G030000--Sobic010G243100 Sobic005G210500 Sobic005G210500 Sobic010G030000--Sobic005G210500 Sobic003G216600 Sobic003G216600 Sobic010G030000--Sobic003G216600 Sobic001G486600 Sobic001G486600 Sobic010G030000--Sobic001G486600 Sobic010G222800 Sobic010G222800 Sobic010G030000--Sobic010G222800 Sobic006G272800 Sobic006G272800 Sobic008G070700--Sobic006G272800 Sobic008G070700--Sobic002G112000 Sobic008G070700--Sobic004G267600 Sobic001G439800 Sobic001G439800 Sobic008G070700--Sobic001G439800 Sobic008G070700--Sobic010G222800 Sobic008G070700--Sobic010G092400 Sobic008G070700--Sobic002G317700 Sobic001G175100 Sobic001G175100 Sobic008G070700--Sobic001G175100 Sobic003G393100 Sobic003G393100 Sobic008G070700--Sobic003G393100 Sobic004G070100 Sobic004G070100 Sobic007G096800--Sobic004G070100 Sobic003G354500 Sobic003G354500 Sobic007G096800--Sobic003G354500 Sobic007G096800--Sobic010G030000 Sobic002G123600 Sobic002G123600 Sobic007G096800--Sobic002G123600 Sobic007G096800--Sobic010G038200 Sobic001G154300 Sobic001G154300 Sobic007G096800--Sobic001G154300 Sobic003G050700 Sobic003G050700 Sobic007G096800--Sobic003G050700 Sobic007G221700 Sobic007G221700 Sobic007G096800--Sobic007G221700 Sobic008G022500 Sobic008G022500 Sobic007G096800--Sobic008G022500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.