Gene annotation
Transcriptome id Sobic.010G069300.2
Synonym CYP709B2, Sb10g006050
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
cytochrome P450 72A1, putative, expressed
UniProt A0A1W0VRV5
Pfam PF00067
Panther DB PTHR24282 PTHR24282:SF52
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K15639; CYP734A1, PHYB activation tagged suppressor 1
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G46950 : cytochrome P450, family 709, subfamily B, polypeptide 2
RAP-DB (Rice) LOC_Os06g09210.1 : cytochrome P450 72A1, putative, expressed
MaizeGDB (Corn) Zm00025a048892 , Zm00025a015288 , Zm00025a015287 , Zm00025a042421 , Zm00025a042420 , Zm00025a006307 , Zm00025a049716
Brachypodium KQK15033 , KQK15036 , KQJ90173 , KQJ98354 , KQK19190
Barley HORVU5Hr1G060870.4 , HORVU2Hr1G027460.1 , HORVU2Hr1G027460.3 , HORVU2Hr1G027460.2 , HORVU7Hr1G031730.3 , HORVU7Hr1G031730.2 , HORVU7Hr1G031730.1 , HORVU7Hr1G031730.6 , HORVU7Hr1G031730.5 , HORVU7Hr1G031730.4 , HORVU5Hr1G114900.8 , HORVU5Hr1G114900.15 , HORVU5Hr1G060870.8 , HORVU5Hr1G060870.5 , HORVU5Hr1G060870.1 , HORVU5Hr1G060870.2 , HORVU5Hr1G060870.3 , HORVU7Hr1G077590.1 , HORVU5Hr1G060870.6 , HORVU5Hr1G060870.7 , HORVU5Hr1G114900.16
Wheat TraesCS7D02G155400 , TraesCS7B02G224900 , TraesCS5B02G203900 , TraesCS7B02G059200 , TraesCS2D02G157400 , TraesCS7A02G155000 , TraesCS7B02G059100 , TraesCS7D02G320600 , TraesCS7D02G320600 , TraesCS5A02G204300 , TraesCS7D02G155300 , TraesCS2A02G152300 , TraesCS7A02G324300 , TraesCS5D02G211800 , TraesCS5D02G211800 , TraesCS2B02G177400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G303500 DNA-directed RNA polymerase subunit beta, putative, expressed -
2 Sobic.001G525500 TKL_IRAK_CrRLK1L-1.6 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
3 Sobic.006G209700 CAX-interacting protein 4, putative, expressed -
4 Sobic.006G174050 - K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
5 Sobic.009G215100 jacalin-like lectin domain containing protein, expressed -
6 Sobic.004G023600 expressed protein -
7 Sobic.003G205000 DUF623 domain containing protein, expressed -
8 Sobic.002G334700 - -
9 Sobic.003G233332 - -
10 Sobic.001G516400 - -
11 Sobic.003G436100 zinc knuckle domain containing protein, expressed -
12 Sobic.001G413300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
13 Sobic.K031400 ATP synthase protein YMF19, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
14 Sobic.003G034350 - -
15 Sobic.006G053550 - -
16 Sobic.002G199300 - -
17 Sobic.009G082800 - -
18 Sobic.010G098800 NADH-ubiquinone oxidoreductase chain 6, putative, expressed K03884: NADH-ubiquinone oxidoreductase chain 6
19 Sobic.001G224500 - -
20 Sobic.001G443400 conserved hypothetical protein -


Gene co-expression network
sample Sobic010G069300 Sobic010G069300 Sobic004G303500 Sobic004G303500 Sobic010G069300--Sobic004G303500 Sobic001G525500 Sobic001G525500 Sobic010G069300--Sobic001G525500 Sobic006G209700 Sobic006G209700 Sobic010G069300--Sobic006G209700 Sobic006G174050 Sobic006G174050 Sobic010G069300--Sobic006G174050 Sobic009G215100 Sobic009G215100 Sobic010G069300--Sobic009G215100 Sobic004G023600 Sobic004G023600 Sobic010G069300--Sobic004G023600 Sobic003G205000 Sobic003G205000 Sobic010G069300--Sobic003G205000 Sobic002G334700 Sobic002G334700 Sobic010G069300--Sobic002G334700 Sobic003G233332 Sobic003G233332 Sobic010G069300--Sobic003G233332 Sobic003G172800 Sobic003G172800 Sobic004G303500--Sobic003G172800 Sobic001G261444 Sobic001G261444 Sobic004G303500--Sobic001G261444 Sobic004G126050 Sobic004G126050 Sobic004G303500--Sobic004G126050 Sobic003G161900 Sobic003G161900 Sobic004G303500--Sobic003G161900 SobicK032200 SobicK032200 Sobic004G303500--SobicK032200 Sobic007G183200 Sobic007G183200 Sobic004G303500--Sobic007G183200 Sobic010G201332 Sobic010G201332 Sobic004G303500--Sobic010G201332 Sobic004G115100 Sobic004G115100 Sobic004G303500--Sobic004G115100 Sobic001G383350 Sobic001G383350 Sobic004G303500--Sobic001G383350 Sobic001G525500--Sobic004G023600 Sobic001G525500--Sobic006G174050 Sobic002G199300 Sobic002G199300 Sobic001G525500--Sobic002G199300 Sobic001G525500--Sobic004G303500 Sobic001G525500--Sobic003G205000 Sobic010G266400 Sobic010G266400 Sobic001G525500--Sobic010G266400 Sobic001G525500--Sobic009G215100 Sobic006G053550 Sobic006G053550 Sobic001G525500--Sobic006G053550 Sobic010G166201 Sobic010G166201 Sobic001G525500--Sobic010G166201 Sobic003G023450 Sobic003G023450 Sobic006G209700--Sobic003G023450 Sobic005G019250 Sobic005G019250 Sobic006G209700--Sobic005G019250 Sobic001G202450 Sobic001G202450 Sobic006G209700--Sobic001G202450 Sobic001G497400 Sobic001G497400 Sobic006G209700--Sobic001G497400 Sobic005G045250 Sobic005G045250 Sobic006G209700--Sobic005G045250 Sobic009G077000 Sobic009G077000 Sobic006G209700--Sobic009G077000 Sobic004G252300 Sobic004G252300 Sobic006G209700--Sobic004G252300 Sobic001G278900 Sobic001G278900 Sobic006G209700--Sobic001G278900 Sobic003G085533 Sobic003G085533 Sobic006G209700--Sobic003G085533 Sobic009G170050 Sobic009G170050 Sobic006G174050--Sobic009G170050 Sobic006G174050--Sobic003G205000 Sobic009G158150 Sobic009G158150 Sobic006G174050--Sobic009G158150 Sobic006G174050--Sobic010G266400 Sobic006G174050--Sobic010G166201 Sobic005G168900 Sobic005G168900 Sobic006G174050--Sobic005G168900 Sobic001G516400 Sobic001G516400 Sobic006G174050--Sobic001G516400 Sobic006G174050--Sobic002G199300 Sobic002G178900 Sobic002G178900 Sobic006G174050--Sobic002G178900 Sobic009G215100--Sobic006G053550 Sobic003G173200 Sobic003G173200 Sobic009G215100--Sobic003G173200 Sobic009G215100--Sobic003G205000 SobicK031400 SobicK031400 Sobic009G215100--SobicK031400 Sobic003G268100 Sobic003G268100 Sobic009G215100--Sobic003G268100 Sobic010G098800 Sobic010G098800 Sobic009G215100--Sobic010G098800 Sobic001G224500 Sobic001G224500 Sobic009G215100--Sobic001G224500 SobicK031900 SobicK031900 Sobic009G215100--SobicK031900 Sobic004G310350 Sobic004G310350 Sobic009G215100--Sobic004G310350 Sobic001G397550 Sobic001G397550 Sobic004G023600--Sobic001G397550 Sobic004G199100 Sobic004G199100 Sobic004G023600--Sobic004G199100 Sobic006G261650 Sobic006G261650 Sobic004G023600--Sobic006G261650 Sobic003G169700 Sobic003G169700 Sobic004G023600--Sobic003G169700 Sobic003G327950 Sobic003G327950 Sobic004G023600--Sobic003G327950 Sobic007G028300 Sobic007G028300 Sobic004G023600--Sobic007G028300 Sobic002G033550 Sobic002G033550 Sobic004G023600--Sobic002G033550 Sobic004G303900 Sobic004G303900 Sobic004G023600--Sobic004G303900 Sobic003G163000 Sobic003G163000 Sobic004G023600--Sobic003G163000 Sobic003G205000--Sobic009G215100 Sobic003G205000--Sobic006G053550 Sobic003G205000--Sobic002G199300 Sobic003G205000--Sobic002G334700 Sobic003G205000--Sobic004G310350 Sobic003G205000--Sobic003G173200 Sobic003G205000--Sobic001G224500 Sobic003G205000--SobicK031400 Sobic002G094100 Sobic002G094100 Sobic003G205000--Sobic002G094100 Sobic002G334700--Sobic003G205000 Sobic002G334700--Sobic002G199300 Sobic002G334700--Sobic009G215100 Sobic002G334700--Sobic006G053550 Sobic003G436100 Sobic003G436100 Sobic002G334700--Sobic003G436100 Sobic003G059450 Sobic003G059450 Sobic002G334700--Sobic003G059450 Sobic009G188200 Sobic009G188200 Sobic002G334700--Sobic009G188200 Sobic002G334700--Sobic002G094100 Sobic003G031300 Sobic003G031300 Sobic002G334700--Sobic003G031300 Sobic001G325100 Sobic001G325100 Sobic003G233332--Sobic001G325100 Sobic003G068200 Sobic003G068200 Sobic003G233332--Sobic003G068200 Sobic003G254850 Sobic003G254850 Sobic003G233332--Sobic003G254850 Sobic005G019300 Sobic005G019300 Sobic003G233332--Sobic005G019300 Sobic002G316400 Sobic002G316400 Sobic003G233332--Sobic002G316400 Sobic001G279800 Sobic001G279800 Sobic003G233332--Sobic001G279800 Sobic005G024500 Sobic005G024500 Sobic003G233332--Sobic005G024500 Sobic008G053500 Sobic008G053500 Sobic003G233332--Sobic008G053500 Sobic008G138850 Sobic008G138850 Sobic003G233332--Sobic008G138850
Octagon: transcription factors


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