Gene annotation
Transcriptome id Sobic.001G525500.1
Synonym Sb01g048920, HERK1
Functional annotation TKL_IRAK_CrRLK1L-1.6 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
UniProt C5X026
Pfam PF12819 PF07714
Panther DB PTHR27003 PTHR27003:SF21
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G46290 : hercules receptor kinase 1
RAP-DB (Rice) LOC_Os03g03280.1 : TKL_IRAK_CrRLK1L-1.6 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
MaizeGDB (Corn) Zm00025a000327 , Zm00025a047473 , Zm00025a001899 , Zm00025a041336 , Zm00025a050223
Brachypodium KQK23907 , KQK03621 , KQK06928
Barley HORVU4Hr1G066310.2 , HORVU4Hr1G066310.10 , HORVU4Hr1G066310.11 , HORVU4Hr1G066310.8 , HORVU4Hr1G066310.9 , HORVU2Hr1G113120.2 , HORVU2Hr1G113120.3 , HORVU2Hr1G013080.1 , HORVU4Hr1G087720.2 , HORVU4Hr1G087720.1 , HORVU4Hr1G087720.9 , HORVU2Hr1G113120.1 , HORVU4Hr1G084510.1 , HORVU4Hr1G084510.2 , HORVU4Hr1G084510.3 , HORVU4Hr1G084510.4 , HORVU4Hr1G087720.10 , HORVU4Hr1G087720.11 , HORVU4Hr1G087720.12 , HORVU4Hr1G087720.13 , HORVU7Hr1G010130.1 , HORVU4Hr1G000730.1 , HORVU4Hr1G000730.2 , HORVU4Hr1G000730.3 , HORVU1Hr1G024070.1 , HORVU1Hr1G024070.2 , HORVU1Hr1G024070.3
Wheat TraesCS2B02G094400 , TraesCS4D02G238900 , TraesCS4B02G367000 , TraesCS5B02G005400 , TraesCS5B02G005400 , TraesCS5B02G005400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G023600 expressed protein -
2 Sobic.006G174050 - K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
3 Sobic.002G199300 - -
4 Sobic.004G303500 DNA-directed RNA polymerase subunit beta, putative, expressed -
5 Sobic.003G205000 DUF623 domain containing protein, expressed -
6 Sobic.010G266400 - -
7 Sobic.009G215100 jacalin-like lectin domain containing protein, expressed -
8 Sobic.006G053550 - -
9 Sobic.010G166201 - -
10 Sobic.001G443400 conserved hypothetical protein -
11 Sobic.003G357900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@strictosidine synthase, putative, expressed -
12 Sobic.007G050650 - -
13 Sobic.005G192350 - -
14 Sobic.009G170050 - -
15 Sobic.002G334700 - -
16 Sobic.008G174200 NBS-LRR type disease resistance protein, putative, expressed -
17 Sobic.004G252300 CCT/B-box zinc finger protein, putative, expressed -
18 Sobic.004G250000 OsMADS57 - MADS-box family gene with MIKCc type-box, expressed -
19 Sobic.010G069300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
20 Sobic.009G158150 - -


Gene co-expression network
sample Sobic001G525500 Sobic001G525500 Sobic004G023600 Sobic004G023600 Sobic001G525500--Sobic004G023600 Sobic006G174050 Sobic006G174050 Sobic001G525500--Sobic006G174050 Sobic002G199300 Sobic002G199300 Sobic001G525500--Sobic002G199300 Sobic004G303500 Sobic004G303500 Sobic001G525500--Sobic004G303500 Sobic003G205000 Sobic003G205000 Sobic001G525500--Sobic003G205000 Sobic010G266400 Sobic010G266400 Sobic001G525500--Sobic010G266400 Sobic009G215100 Sobic009G215100 Sobic001G525500--Sobic009G215100 Sobic006G053550 Sobic006G053550 Sobic001G525500--Sobic006G053550 Sobic010G166201 Sobic010G166201 Sobic001G525500--Sobic010G166201 Sobic001G397550 Sobic001G397550 Sobic004G023600--Sobic001G397550 Sobic004G199100 Sobic004G199100 Sobic004G023600--Sobic004G199100 Sobic006G261650 Sobic006G261650 Sobic004G023600--Sobic006G261650 Sobic003G169700 Sobic003G169700 Sobic004G023600--Sobic003G169700 Sobic003G327950 Sobic003G327950 Sobic004G023600--Sobic003G327950 Sobic007G028300 Sobic007G028300 Sobic004G023600--Sobic007G028300 Sobic002G033550 Sobic002G033550 Sobic004G023600--Sobic002G033550 Sobic004G303900 Sobic004G303900 Sobic004G023600--Sobic004G303900 Sobic003G163000 Sobic003G163000 Sobic004G023600--Sobic003G163000 Sobic009G170050 Sobic009G170050 Sobic006G174050--Sobic009G170050 Sobic006G174050--Sobic003G205000 Sobic009G158150 Sobic009G158150 Sobic006G174050--Sobic009G158150 Sobic006G174050--Sobic010G266400 Sobic006G174050--Sobic010G166201 Sobic005G168900 Sobic005G168900 Sobic006G174050--Sobic005G168900 Sobic001G516400 Sobic001G516400 Sobic006G174050--Sobic001G516400 Sobic006G174050--Sobic002G199300 Sobic002G178900 Sobic002G178900 Sobic006G174050--Sobic002G178900 Sobic002G199300--Sobic003G205000 Sobic002G334700 Sobic002G334700 Sobic002G199300--Sobic002G334700 Sobic002G199300--Sobic010G266400 Sobic002G199300--Sobic009G215100 Sobic002G199300--Sobic006G053550 Sobic001G443400 Sobic001G443400 Sobic002G199300--Sobic001G443400 Sobic002G199300--Sobic006G174050 Sobic005G192350 Sobic005G192350 Sobic002G199300--Sobic005G192350 Sobic002G199300--Sobic010G166201 Sobic003G172800 Sobic003G172800 Sobic004G303500--Sobic003G172800 Sobic001G261444 Sobic001G261444 Sobic004G303500--Sobic001G261444 Sobic004G126050 Sobic004G126050 Sobic004G303500--Sobic004G126050 Sobic003G161900 Sobic003G161900 Sobic004G303500--Sobic003G161900 SobicK032200 SobicK032200 Sobic004G303500--SobicK032200 Sobic007G183200 Sobic007G183200 Sobic004G303500--Sobic007G183200 Sobic010G201332 Sobic010G201332 Sobic004G303500--Sobic010G201332 Sobic004G115100 Sobic004G115100 Sobic004G303500--Sobic004G115100 Sobic001G383350 Sobic001G383350 Sobic004G303500--Sobic001G383350 Sobic003G205000--Sobic009G215100 Sobic003G205000--Sobic006G053550 Sobic003G205000--Sobic002G199300 Sobic003G205000--Sobic002G334700 Sobic004G310350 Sobic004G310350 Sobic003G205000--Sobic004G310350 Sobic003G173200 Sobic003G173200 Sobic003G205000--Sobic003G173200 Sobic001G224500 Sobic001G224500 Sobic003G205000--Sobic001G224500 SobicK031400 SobicK031400 Sobic003G205000--SobicK031400 Sobic002G094100 Sobic002G094100 Sobic003G205000--Sobic002G094100 Sobic007G050650 Sobic007G050650 Sobic010G266400--Sobic007G050650 Sobic010G266400--Sobic002G199300 Sobic010G266400--Sobic001G443400 Sobic010G266400--Sobic005G192350 Sobic010G266400--Sobic003G205000 Sobic010G266400--Sobic006G174050 Sobic007G020400 Sobic007G020400 Sobic010G266400--Sobic007G020400 Sobic010G266400--Sobic002G334700 Sobic010G064300 Sobic010G064300 Sobic010G266400--Sobic010G064300 Sobic009G215100--Sobic006G053550 Sobic009G215100--Sobic003G173200 Sobic009G215100--Sobic003G205000 Sobic009G215100--SobicK031400 Sobic003G268100 Sobic003G268100 Sobic009G215100--Sobic003G268100 Sobic010G098800 Sobic010G098800 Sobic009G215100--Sobic010G098800 Sobic009G215100--Sobic001G224500 SobicK031900 SobicK031900 Sobic009G215100--SobicK031900 Sobic009G215100--Sobic004G310350 Sobic006G053550--Sobic009G215100 Sobic006G053550--Sobic004G310350 Sobic006G053550--Sobic003G205000 Sobic006G053550--Sobic001G224500 Sobic006G053550--SobicK031400 Sobic006G053550--Sobic003G173200 Sobic006G053550--SobicK031900 Sobic006G053550--Sobic003G268100 Sobic006G053550--Sobic002G334700 Sobic002G073000 Sobic002G073000 Sobic010G166201--Sobic002G073000 Sobic010G166201--Sobic009G158150 Sobic010G259800 Sobic010G259800 Sobic010G166201--Sobic010G259800 Sobic001G050650 Sobic001G050650 Sobic010G166201--Sobic001G050650 Sobic010G166201--Sobic001G443400 Sobic006G053601 Sobic006G053601 Sobic010G166201--Sobic006G053601 Sobic010G166201--Sobic010G098800 Sobic010G166201--Sobic001G516400 Sobic007G045750 Sobic007G045750 Sobic010G166201--Sobic007G045750
Octagon: transcription factors


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