Gene annotation
Transcriptome id Sobic.010G076100.1
Synonym
Functional annotation -
UniProt A0A194YHX7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
3 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
4 Sobic.004G088000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G269000 STE_MEKK_ste11_MAP3K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
6 Sobic.001G363400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
7 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.003G073380 - -
9 Sobic.003G230100 expressed protein -
10 Sobic.009G144600 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
12 Sobic.002G220000 expressed protein -
13 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
14 Sobic.004G246600 expressed protein -
15 Sobic.004G352000 cytochrome P450, putative, expressed -
16 Sobic.004G097100 F-box family protein, putative, expressed -
17 Sobic.008G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Phospholipase dalpha 1(PubMedID : 26320239)@Phospholipase D alpha 1 PLD Alpha 1 (Zm)(PubMedID : 27208977)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@phospholipase D, putative, expressed K01115: phospholipase D1/2
18 Sobic.005G013500 WRKY52, expressed -
19 Sobic.004G315200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
20 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase


Gene co-expression network
sample Sobic010G076100 Sobic010G076100 Sobic004G219800 Sobic004G219800 Sobic010G076100--Sobic004G219800 Sobic002G184300 Sobic002G184300 Sobic010G076100--Sobic002G184300 Sobic001G330400 Sobic001G330400 Sobic010G076100--Sobic001G330400 Sobic004G088000 Sobic004G088000 Sobic010G076100--Sobic004G088000 Sobic003G269000 Sobic003G269000 Sobic010G076100--Sobic003G269000 Sobic001G363400 Sobic001G363400 Sobic010G076100--Sobic001G363400 Sobic009G032000 Sobic009G032000 Sobic010G076100--Sobic009G032000 Sobic003G073380 Sobic003G073380 Sobic010G076100--Sobic003G073380 Sobic003G230100 Sobic003G230100 Sobic010G076100--Sobic003G230100 Sobic001G256700 Sobic001G256700 Sobic004G219800--Sobic001G256700 Sobic001G330100 Sobic001G330100 Sobic004G219800--Sobic001G330100 Sobic004G352000 Sobic004G352000 Sobic004G219800--Sobic004G352000 Sobic004G219800--Sobic001G330400 Sobic004G219800--Sobic009G032000 Sobic008G187001 Sobic008G187001 Sobic004G219800--Sobic008G187001 Sobic002G388900 Sobic002G388900 Sobic004G219800--Sobic002G388900 Sobic007G017500 Sobic007G017500 Sobic004G219800--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G219800--Sobic006G075400 Sobic002G184300--Sobic001G363400 Sobic002G184300--Sobic003G230100 Sobic002G358300 Sobic002G358300 Sobic002G184300--Sobic002G358300 Sobic004G097100 Sobic004G097100 Sobic002G184300--Sobic004G097100 Sobic002G184300--Sobic009G032000 Sobic009G205500 Sobic009G205500 Sobic002G184300--Sobic009G205500 Sobic004G246600 Sobic004G246600 Sobic002G184300--Sobic004G246600 Sobic005G013500 Sobic005G013500 Sobic002G184300--Sobic005G013500 Sobic004G308900 Sobic004G308900 Sobic002G184300--Sobic004G308900 Sobic003G268600 Sobic003G268600 Sobic001G330400--Sobic003G268600 Sobic001G330400--Sobic006G075400 Sobic001G330400--Sobic004G219800 Sobic001G330400--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic001G330400--Sobic009G122400 Sobic004G294400 Sobic004G294400 Sobic001G330400--Sobic004G294400 Sobic001G318700 Sobic001G318700 Sobic001G330400--Sobic001G318700 Sobic002G220000 Sobic002G220000 Sobic001G330400--Sobic002G220000 Sobic001G330400--Sobic001G330100 Sobic004G088000--Sobic010G076100 Sobic007G058400 Sobic007G058400 Sobic004G088000--Sobic007G058400 Sobic010G182200 Sobic010G182200 Sobic004G088000--Sobic010G182200 Sobic010G081100 Sobic010G081100 Sobic004G088000--Sobic010G081100 Sobic004G088000--Sobic009G032000 Sobic004G088000--Sobic005G013500 Sobic004G088000--Sobic004G219800 Sobic004G088000--Sobic001G330400 Sobic002G377000 Sobic002G377000 Sobic004G088000--Sobic002G377000 Sobic003G269000--Sobic003G073380 Sobic005G086600 Sobic005G086600 Sobic003G269000--Sobic005G086600 Sobic003G269000--Sobic003G268600 Sobic009G186800 Sobic009G186800 Sobic003G269000--Sobic009G186800 Sobic006G235000 Sobic006G235000 Sobic003G269000--Sobic006G235000 Sobic003G269000--Sobic001G330400 Sobic004G064500 Sobic004G064500 Sobic003G269000--Sobic004G064500 Sobic004G315200 Sobic004G315200 Sobic003G269000--Sobic004G315200 Sobic002G063800 Sobic002G063800 Sobic003G269000--Sobic002G063800 Sobic001G363400--Sobic002G184300 Sobic001G330200 Sobic001G330200 Sobic001G363400--Sobic001G330200 Sobic001G363400--Sobic005G013500 Sobic001G363400--Sobic009G032000 Sobic001G363400--Sobic001G330100 Sobic001G363400--Sobic002G358300 Sobic009G144700 Sobic009G144700 Sobic001G363400--Sobic009G144700 Sobic001G363400--Sobic001G330400 Sobic001G363400--Sobic004G246600 Sobic009G032000--Sobic001G256700 Sobic009G032000--Sobic002G388900 Sobic009G032000--Sobic004G219800 Sobic009G032000--Sobic002G358300 Sobic009G032000--Sobic004G308900 Sobic009G032000--Sobic004G246600 Sobic009G032000--Sobic001G330100 Sobic009G032000--Sobic005G013500 Sobic002G395300 Sobic002G395300 Sobic009G032000--Sobic002G395300 Sobic003G073380--Sobic003G269000 Sobic003G073380--Sobic005G086600 Sobic004G161751 Sobic004G161751 Sobic003G073380--Sobic004G161751 Sobic009G145500 Sobic009G145500 Sobic003G073380--Sobic009G145500 Sobic003G073380--Sobic003G268600 Sobic003G043600 Sobic003G043600 Sobic003G073380--Sobic003G043600 Sobic003G073380--Sobic001G330400 Sobic003G050300 Sobic003G050300 Sobic003G073380--Sobic003G050300 Sobic003G079200 Sobic003G079200 Sobic003G073380--Sobic003G079200 Sobic003G230100--Sobic004G097100 Sobic003G230100--Sobic002G184300 Sobic003G230100--Sobic004G219800 Sobic003G230100--Sobic002G395300 Sobic006G216700 Sobic006G216700 Sobic003G230100--Sobic006G216700 Sobic004G169200 Sobic004G169200 Sobic003G230100--Sobic004G169200 Sobic003G230100--Sobic009G032000 Sobic003G230100--Sobic002G358300 Sobic003G230100--Sobic002G220000
Octagon: transcription factors


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