Gene annotation
Transcriptome id Sobic.010G116300.1
Synonym Sb10g010280
Functional annotation armadillo/beta-catenin repeat family protein, putative, expressed
UniProt A0A194YIJ4
Pfam PF04564
Panther DB PTHR22849 PTHR22849:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G68940 : Armadillo/beta-catenin-like repeat family protein
RAP-DB (Rice) LOC_Os06g16410.1 : armadillo/beta-catenin repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a032605 , Zm00025a050461
Brachypodium KQK18612 , PNT76071
Barley HORVU0Hr1G020210.1
Wheat TraesCS7B02G118900 , TraesCS7D02G213600 , TraesCS7A02G212000 , TraesCS7B02G118900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G112000 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
2 Sobic.006G022301 - -
3 Sobic.004G251000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING finger protein, putative, expressed -
4 Sobic.007G152500 cytochrome P450, putative, expressed -
5 Sobic.003G231200 - -
6 Sobic.001G446000 protein kinase, putative, expressed -
7 Sobic.003G196500 - -
8 Sobic.004G090300 OsFBX46 - F-box domain containing protein, expressed -
9 Sobic.004G187200 ICE-like protease p20 domain containing protein, putative, expressed -
10 Sobic.003G364400 Ferredoxin-6 (Zm)(PubMedID : 27208977)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
11 Sobic.001G129500 - -
12 Sobic.002G193000 EARLY flowering protein, putative, expressed -
13 Sobic.001G099500 ankyrin repeat family protein, putative, expressed -
14 Sobic.007G060550 - -
15 Sobic.007G176500 - -
16 Sobic.001G087400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@anther-specific proline-rich protein APG precursor, putative, expressed -
17 Sobic.002G029200 - -
18 Sobic.010G093400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Starch synthesis(PubMedID : 31624872)@Starch Synthase IIa(PubMedID : 21853065)@soluble starch synthase 2-3, chloroplast precursor, putative, expressed K00703: starch synthase
19 Sobic.010G010600 - -
20 Sobic.003G353000 WRKY56, expressed -


Gene co-expression network
sample Sobic010G116300 Sobic010G116300 Sobic008G112000 Sobic008G112000 Sobic010G116300--Sobic008G112000 Sobic006G022301 Sobic006G022301 Sobic010G116300--Sobic006G022301 Sobic004G251000 Sobic004G251000 Sobic010G116300--Sobic004G251000 Sobic007G152500 Sobic007G152500 Sobic010G116300--Sobic007G152500 Sobic003G231200 Sobic003G231200 Sobic010G116300--Sobic003G231200 Sobic001G446000 Sobic001G446000 Sobic010G116300--Sobic001G446000 Sobic003G196500 Sobic003G196500 Sobic010G116300--Sobic003G196500 Sobic004G090300 Sobic004G090300 Sobic010G116300--Sobic004G090300 Sobic004G187200 Sobic004G187200 Sobic010G116300--Sobic004G187200 Sobic008G112000--Sobic010G116300 Sobic008G112000--Sobic004G251000 Sobic008G112000--Sobic003G196500 Sobic002G193000 Sobic002G193000 Sobic008G112000--Sobic002G193000 Sobic003G283000 Sobic003G283000 Sobic008G112000--Sobic003G283000 Sobic005G196533 Sobic005G196533 Sobic008G112000--Sobic005G196533 Sobic003G364400 Sobic003G364400 Sobic008G112000--Sobic003G364400 Sobic001G491600 Sobic001G491600 Sobic008G112000--Sobic001G491600 Sobic003G034100 Sobic003G034100 Sobic008G112000--Sobic003G034100 Sobic002G059100 Sobic002G059100 Sobic006G022301--Sobic002G059100 Sobic001G059800 Sobic001G059800 Sobic006G022301--Sobic001G059800 Sobic006G022301--Sobic003G231200 Sobic001G297300 Sobic001G297300 Sobic006G022301--Sobic001G297300 Sobic001G234000 Sobic001G234000 Sobic006G022301--Sobic001G234000 Sobic007G064400 Sobic007G064400 Sobic006G022301--Sobic007G064400 Sobic003G302466 Sobic003G302466 Sobic006G022301--Sobic003G302466 Sobic002G320300 Sobic002G320300 Sobic006G022301--Sobic002G320300 Sobic010G274300 Sobic010G274300 Sobic006G022301--Sobic010G274300 Sobic006G064500 Sobic006G064500 Sobic004G251000--Sobic006G064500 Sobic004G251000--Sobic008G112000 Sobic002G259900 Sobic002G259900 Sobic004G251000--Sobic002G259900 Sobic003G443601 Sobic003G443601 Sobic004G251000--Sobic003G443601 Sobic007G138200 Sobic007G138200 Sobic004G251000--Sobic007G138200 Sobic004G251000--Sobic003G196500 Sobic006G151100 Sobic006G151100 Sobic004G251000--Sobic006G151100 Sobic004G251000--Sobic003G283000 Sobic010G196433 Sobic010G196433 Sobic004G251000--Sobic010G196433 Sobic010G093400 Sobic010G093400 Sobic007G152500--Sobic010G093400 Sobic002G420800 Sobic002G420800 Sobic007G152500--Sobic002G420800 Sobic003G358200 Sobic003G358200 Sobic007G152500--Sobic003G358200 Sobic005G198700 Sobic005G198700 Sobic007G152500--Sobic005G198700 Sobic007G204600 Sobic007G204600 Sobic007G152500--Sobic007G204600 Sobic002G053100 Sobic002G053100 Sobic007G152500--Sobic002G053100 Sobic005G090500 Sobic005G090500 Sobic007G152500--Sobic005G090500 Sobic001G037800 Sobic001G037800 Sobic007G152500--Sobic001G037800 Sobic006G031000 Sobic006G031000 Sobic007G152500--Sobic006G031000 Sobic003G231200--Sobic002G320300 Sobic003G231200--Sobic006G022301 Sobic003G231200--Sobic007G064400 Sobic002G424550 Sobic002G424550 Sobic003G231200--Sobic002G424550 Sobic003G231200--Sobic004G090300 Sobic003G231200--Sobic001G234000 Sobic003G231200--Sobic003G302466 Sobic003G231200--Sobic002G059100 Sobic003G247100 Sobic003G247100 Sobic003G231200--Sobic003G247100 Sobic006G164000 Sobic006G164000 Sobic001G446000--Sobic006G164000 Sobic001G419700 Sobic001G419700 Sobic001G446000--Sobic001G419700 Sobic001G446000--Sobic003G358200 Sobic001G446000--Sobic007G152500 Sobic010G033300 Sobic010G033300 Sobic001G446000--Sobic010G033300 Sobic009G254000 Sobic009G254000 Sobic001G446000--Sobic009G254000 Sobic006G261200 Sobic006G261200 Sobic001G446000--Sobic006G261200 Sobic001G379000 Sobic001G379000 Sobic001G446000--Sobic001G379000 Sobic008G092400 Sobic008G092400 Sobic001G446000--Sobic008G092400 Sobic010G079150 Sobic010G079150 Sobic003G196500--Sobic010G079150 Sobic006G110101 Sobic006G110101 Sobic003G196500--Sobic006G110101 Sobic001G369550 Sobic001G369550 Sobic003G196500--Sobic001G369550 Sobic008G052700 Sobic008G052700 Sobic003G196500--Sobic008G052700 Sobic008G043000 Sobic008G043000 Sobic003G196500--Sobic008G043000 Sobic009G225250 Sobic009G225250 Sobic003G196500--Sobic009G225250 Sobic003G063801 Sobic003G063801 Sobic003G196500--Sobic003G063801 Sobic002G250700 Sobic002G250700 Sobic003G196500--Sobic002G250700 Sobic009G163000 Sobic009G163000 Sobic003G196500--Sobic009G163000 Sobic006G279000 Sobic006G279000 Sobic004G090300--Sobic006G279000 Sobic004G090300--Sobic001G234000 Sobic002G147500 Sobic002G147500 Sobic004G090300--Sobic002G147500 Sobic002G291132 Sobic002G291132 Sobic004G090300--Sobic002G291132 Sobic001G530400 Sobic001G530400 Sobic004G090300--Sobic001G530400 Sobic004G090300--Sobic004G187200 Sobic002G211501 Sobic002G211501 Sobic004G090300--Sobic002G211501 Sobic001G330600 Sobic001G330600 Sobic004G090300--Sobic001G330600 Sobic006G036201 Sobic006G036201 Sobic004G090300--Sobic006G036201 Sobic004G187200--Sobic001G234000 Sobic004G187200--Sobic004G090300 Sobic009G029900 Sobic009G029900 Sobic004G187200--Sobic009G029900 Sobic004G090200 Sobic004G090200 Sobic004G187200--Sobic004G090200 Sobic004G187200--Sobic002G147500 Sobic004G187200--Sobic006G279000 Sobic004G187200--Sobic007G064400 Sobic004G187200--Sobic001G330600 Sobic004G187200--Sobic001G530400
Octagon: transcription factors


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