Gene annotation
Transcriptome id Sobic.001G446000.1
Synonym Sb01g041910
Functional annotation protein kinase, putative, expressed
UniProt C5WRQ0
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF25
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G34500 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g12680.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a052966 , Zm00025a001431 , Zm00025a018713 , Zm00025a037301
Brachypodium KQK22732
Barley HORVU4Hr1G065470.7 , HORVU4Hr1G065470.4 , HORVU4Hr1G065470.5 , HORVU4Hr1G065470.2 , HORVU4Hr1G065470.3 , HORVU4Hr1G065470.1 , HORVU7Hr1G099520.1 , HORVU7Hr1G099520.2 , HORVU7Hr1G099520.3
Wheat TraesCS4B02G234200 , TraesCS4A02G078100 , TraesCS4D02G235400
Populus -


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cDNA sequences
Sobic.001G446000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G164000 expressed protein -
2 Sobic.001G419700 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
3 Sobic.003G358200 reticulon domain containing protein, putative, expressed -
4 Sobic.007G152500 cytochrome P450, putative, expressed -
5 Sobic.010G033300 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
6 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
7 Sobic.006G261200 Trihelix Family(PubMedID : 24864043)@GL4(Ortholog in rice:Wu et al. (2017) )(PubMedID : 31659902)@transcription factor, putative, expressed -
8 Sobic.001G379000 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
9 Sobic.008G092400 - -
10 Sobic.002G103700 - -
11 Sobic.001G170500 expressed protein -
12 Sobic.010G150200 OsFBX209 - F-box domain containing protein, expressed -
13 Sobic.002G400400 choline transporter-related, putative, expressed -
14 Sobic.002G250550 - -
15 Sobic.007G023600 ATP binding protein, putative, expressed -
16 Sobic.010G093400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Starch synthesis(PubMedID : 31624872)@Starch Synthase IIa(PubMedID : 21853065)@soluble starch synthase 2-3, chloroplast precursor, putative, expressed K00703: starch synthase
17 Sobic.007G093300 expressed protein -
18 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
19 Sobic.002G257900 Highest expression level in primordial inflorescence(PubMedID : 27501690)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659857)@OsSPL18 - SBP-box gene family member, expressed -
20 Sobic.001G166401 - -


Gene co-expression network
sample Sobic001G446000 Sobic001G446000 Sobic006G164000 Sobic006G164000 Sobic001G446000--Sobic006G164000 Sobic001G419700 Sobic001G419700 Sobic001G446000--Sobic001G419700 Sobic003G358200 Sobic003G358200 Sobic001G446000--Sobic003G358200 Sobic007G152500 Sobic007G152500 Sobic001G446000--Sobic007G152500 Sobic010G033300 Sobic010G033300 Sobic001G446000--Sobic010G033300 Sobic009G254000 Sobic009G254000 Sobic001G446000--Sobic009G254000 Sobic006G261200 Sobic006G261200 Sobic001G446000--Sobic006G261200 Sobic001G379000 Sobic001G379000 Sobic001G446000--Sobic001G379000 Sobic008G092400 Sobic008G092400 Sobic001G446000--Sobic008G092400 Sobic006G164000--Sobic003G358200 Sobic004G155300 Sobic004G155300 Sobic006G164000--Sobic004G155300 Sobic005G084900 Sobic005G084900 Sobic006G164000--Sobic005G084900 Sobic006G164000--Sobic001G419700 Sobic002G420800 Sobic002G420800 Sobic006G164000--Sobic002G420800 Sobic003G159500 Sobic003G159500 Sobic006G164000--Sobic003G159500 Sobic004G345100 Sobic004G345100 Sobic006G164000--Sobic004G345100 Sobic002G400400 Sobic002G400400 Sobic006G164000--Sobic002G400400 Sobic001G170500 Sobic001G170500 Sobic006G164000--Sobic001G170500 Sobic003G402100 Sobic003G402100 Sobic001G419700--Sobic003G402100 Sobic007G128400 Sobic007G128400 Sobic001G419700--Sobic007G128400 Sobic001G419700--Sobic001G170500 Sobic005G198700 Sobic005G198700 Sobic001G419700--Sobic005G198700 Sobic001G419700--Sobic002G420800 Sobic001G068200 Sobic001G068200 Sobic001G419700--Sobic001G068200 Sobic010G227400 Sobic010G227400 Sobic001G419700--Sobic010G227400 Sobic005G102451 Sobic005G102451 Sobic001G419700--Sobic005G102451 Sobic005G056100 Sobic005G056100 Sobic001G419700--Sobic005G056100 Sobic010G093400 Sobic010G093400 Sobic003G358200--Sobic010G093400 Sobic003G358200--Sobic002G420800 Sobic003G358200--Sobic007G152500 Sobic003G358200--Sobic006G164000 Sobic001G067000 Sobic001G067000 Sobic003G358200--Sobic001G067000 Sobic003G358200--Sobic001G379000 Sobic001G294600 Sobic001G294600 Sobic003G358200--Sobic001G294600 Sobic003G358200--Sobic001G419700 Sobic010G207400 Sobic010G207400 Sobic003G358200--Sobic010G207400 Sobic007G152500--Sobic010G093400 Sobic007G152500--Sobic002G420800 Sobic007G152500--Sobic003G358200 Sobic007G152500--Sobic005G198700 Sobic007G204600 Sobic007G204600 Sobic007G152500--Sobic007G204600 Sobic002G053100 Sobic002G053100 Sobic007G152500--Sobic002G053100 Sobic005G090500 Sobic005G090500 Sobic007G152500--Sobic005G090500 Sobic001G037800 Sobic001G037800 Sobic007G152500--Sobic001G037800 Sobic006G031000 Sobic006G031000 Sobic007G152500--Sobic006G031000 Sobic009G082600 Sobic009G082600 Sobic010G033300--Sobic009G082600 Sobic010G150200 Sobic010G150200 Sobic010G033300--Sobic010G150200 Sobic007G211300 Sobic007G211300 Sobic010G033300--Sobic007G211300 Sobic003G223900 Sobic003G223900 Sobic010G033300--Sobic003G223900 Sobic002G257900 Sobic002G257900 Sobic010G033300--Sobic002G257900 Sobic001G119700 Sobic001G119700 Sobic010G033300--Sobic001G119700 Sobic004G234300 Sobic004G234300 Sobic010G033300--Sobic004G234300 Sobic003G410700 Sobic003G410700 Sobic010G033300--Sobic003G410700 Sobic002G267800 Sobic002G267800 Sobic010G033300--Sobic002G267800 Sobic006G140300 Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic002G006100 Sobic002G006100 Sobic009G254000--Sobic002G006100 Sobic004G250600 Sobic004G250600 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic007G023600 Sobic007G023600 Sobic006G261200--Sobic007G023600 Sobic006G261200--Sobic001G170500 Sobic009G168300 Sobic009G168300 Sobic006G261200--Sobic009G168300 Sobic006G261200--Sobic003G402100 Sobic010G118200 Sobic010G118200 Sobic006G261200--Sobic010G118200 Sobic006G261200--Sobic004G250600 Sobic009G017000 Sobic009G017000 Sobic006G261200--Sobic009G017000 Sobic009G253800 Sobic009G253800 Sobic006G261200--Sobic009G253800 Sobic006G261200--Sobic001G068200 Sobic003G129400 Sobic003G129400 Sobic001G379000--Sobic003G129400 Sobic001G379000--Sobic003G358200 Sobic009G156600 Sobic009G156600 Sobic001G379000--Sobic009G156600 Sobic001G206300 Sobic001G206300 Sobic001G379000--Sobic001G206300 Sobic001G379000--Sobic007G152500 Sobic004G155200 Sobic004G155200 Sobic001G379000--Sobic004G155200 Sobic001G379000--Sobic006G164000 Sobic001G379000--Sobic008G092400 Sobic001G379000--Sobic010G093400 Sobic008G092400--Sobic004G155200 Sobic004G331300 Sobic004G331300 Sobic008G092400--Sobic004G331300 Sobic004G155150 Sobic004G155150 Sobic008G092400--Sobic004G155150 Sobic003G367350 Sobic003G367350 Sobic008G092400--Sobic003G367350 Sobic001G159850 Sobic001G159850 Sobic008G092400--Sobic001G159850
Octagon: transcription factors


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