Gene annotation
Transcriptome id Sobic.010G126100.1
Synonym Sb10g011110
Functional annotation aspartic proteinase nepenthesin-2 precursor, putative, expressed
UniProt A0A1W0VSQ8
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF371
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os06g20040.1 : aspartic proteinase nepenthesin-2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021838 , Zm00025a050558
Brachypodium KQK01556 , KQK18505
Barley HORVU6Hr1G071270.5 , HORVU6Hr1G071270.4 , HORVU6Hr1G071270.3 , HORVU6Hr1G071270.2 , HORVU6Hr1G071270.1 , HORVU6Hr1G071210.1 , HORVU6Hr1G071210.3 , HORVU6Hr1G071210.2 , HORVU6Hr1G071210.5 , HORVU6Hr1G071210.9 , HORVU6Hr1G071210.8 , HORVU6Hr1G071520.3 , HORVU6Hr1G071520.2 , HORVU6Hr1G071520.1 , HORVU6Hr1G071520.7 , HORVU6Hr1G071520.6 , HORVU6Hr1G071520.5 , HORVU6Hr1G071520.4 , HORVU6Hr1G071520.8 , HORVU6Hr1G071280.2 , HORVU6Hr1G071280.1 , HORVU7Hr1G045580.7 , HORVU7Hr1G045580.6 , HORVU7Hr1G045580.5 , HORVU7Hr1G045580.4 , HORVU7Hr1G045580.3 , HORVU7Hr1G045580.2 , HORVU7Hr1G045580.1 , HORVU7Hr1G045580.9 , HORVU7Hr1G045580.8 , HORVU6Hr1G071390.1 , HORVU6Hr1G071210.4
Wheat TraesCS7D02G222800 , TraesCS6D02G264200 , TraesCS6D02G264200 , TraesCS6B02G312000 , TraesCS6B02G312000 , TraesCS7B02G128000 , TraesCS6A02G283700 , TraesCS6A02G283700 , TraesCS7A02G219300
Populus -


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cDNA sequences
Sobic.010G126100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G100900 cytokinin-O-glucosyltransferase 2, putative, expressed -
2 Sobic.004G224700 OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
3 Sobic.003G305300 - -
4 Sobic.008G064601 - -
5 Sobic.006G060700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic proline-rich protein, putative, expressed -
6 Sobic.002G242600 expressed protein -
7 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G042301 - -
9 Sobic.004G191200 PsbQ-like protein 1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3, identical, putative, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
10 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
11 Sobic.003G030900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.004G114800 expressed protein -
13 Sobic.002G215000 chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
14 Sobic.004G202600 rhodanese family protein, putative, expressed -
15 Sobic.002G064400 expressed protein -
16 Sobic.009G144200 glycosyl transferase, putative, expressed -
17 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
18 Sobic.002G328900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.003G074700 thylakoid lumenal protein, putative, expressed -
20 Sobic.008G117600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutaredoxin family protein (Os)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3


Gene co-expression network
sample Sobic010G126100 Sobic010G126100 Sobic006G100900 Sobic006G100900 Sobic010G126100--Sobic006G100900 Sobic004G224700 Sobic004G224700 Sobic010G126100--Sobic004G224700 Sobic003G305300 Sobic003G305300 Sobic010G126100--Sobic003G305300 Sobic008G064601 Sobic008G064601 Sobic010G126100--Sobic008G064601 Sobic006G060700 Sobic006G060700 Sobic010G126100--Sobic006G060700 Sobic002G242600 Sobic002G242600 Sobic010G126100--Sobic002G242600 Sobic002G190100 Sobic002G190100 Sobic010G126100--Sobic002G190100 Sobic001G042301 Sobic001G042301 Sobic010G126100--Sobic001G042301 Sobic004G191200 Sobic004G191200 Sobic010G126100--Sobic004G191200 Sobic004G114800 Sobic004G114800 Sobic006G100900--Sobic004G114800 Sobic001G203000 Sobic001G203000 Sobic006G100900--Sobic001G203000 Sobic001G382100 Sobic001G382100 Sobic006G100900--Sobic001G382100 Sobic004G234200 Sobic004G234200 Sobic006G100900--Sobic004G234200 Sobic008G051000 Sobic008G051000 Sobic006G100900--Sobic008G051000 Sobic009G091800 Sobic009G091800 Sobic006G100900--Sobic009G091800 Sobic004G238500 Sobic004G238500 Sobic006G100900--Sobic004G238500 Sobic007G116950 Sobic007G116950 Sobic006G100900--Sobic007G116950 Sobic002G297300 Sobic002G297300 Sobic006G100900--Sobic002G297300 Sobic004G224700--Sobic010G126100 Sobic004G224700--Sobic001G042301 Sobic004G224700--Sobic006G100900 Sobic004G224700--Sobic004G114800 Sobic004G224700--Sobic004G234200 Sobic006G248200 Sobic006G248200 Sobic004G224700--Sobic006G248200 Sobic001G206200 Sobic001G206200 Sobic004G224700--Sobic001G206200 Sobic002G328900 Sobic002G328900 Sobic004G224700--Sobic002G328900 Sobic004G068300 Sobic004G068300 Sobic004G224700--Sobic004G068300 Sobic008G131700 Sobic008G131700 Sobic003G305300--Sobic008G131700 Sobic002G215000 Sobic002G215000 Sobic003G305300--Sobic002G215000 Sobic009G212000 Sobic009G212000 Sobic003G305300--Sobic009G212000 Sobic003G132300 Sobic003G132300 Sobic003G305300--Sobic003G132300 Sobic003G074700 Sobic003G074700 Sobic003G305300--Sobic003G074700 Sobic005G084000 Sobic005G084000 Sobic003G305300--Sobic005G084000 Sobic006G229300 Sobic006G229300 Sobic003G305300--Sobic006G229300 Sobic007G210600 Sobic007G210600 Sobic003G305300--Sobic007G210600 Sobic009G136900 Sobic009G136900 Sobic003G305300--Sobic009G136900 Sobic008G064601--Sobic010G126100 Sobic009G144200 Sobic009G144200 Sobic008G064601--Sobic009G144200 Sobic002G133100 Sobic002G133100 Sobic008G064601--Sobic002G133100 Sobic009G055900 Sobic009G055900 Sobic008G064601--Sobic009G055900 Sobic003G071600 Sobic003G071600 Sobic008G064601--Sobic003G071600 Sobic008G143600 Sobic008G143600 Sobic008G064601--Sobic008G143600 Sobic010G122200 Sobic010G122200 Sobic008G064601--Sobic010G122200 Sobic003G052600 Sobic003G052600 Sobic008G064601--Sobic003G052600 Sobic008G186500 Sobic008G186500 Sobic008G064601--Sobic008G186500 Sobic008G008500 Sobic008G008500 Sobic006G060700--Sobic008G008500 Sobic006G060700--Sobic003G305300 Sobic007G090415 Sobic007G090415 Sobic006G060700--Sobic007G090415 Sobic006G060700--Sobic008G131700 Sobic006G060700--Sobic002G190100 Sobic009G083300 Sobic009G083300 Sobic006G060700--Sobic009G083300 Sobic006G060200 Sobic006G060200 Sobic006G060700--Sobic006G060200 Sobic006G060700--Sobic002G242600 Sobic006G060700--Sobic005G084000 Sobic004G044000 Sobic004G044000 Sobic002G242600--Sobic004G044000 Sobic007G013400 Sobic007G013400 Sobic002G242600--Sobic007G013400 Sobic003G030900 Sobic003G030900 Sobic002G242600--Sobic003G030900 Sobic003G383500 Sobic003G383500 Sobic002G242600--Sobic003G383500 Sobic009G001500 Sobic009G001500 Sobic002G242600--Sobic009G001500 Sobic002G242600--Sobic002G190100 Sobic001G027600 Sobic001G027600 Sobic002G242600--Sobic001G027600 Sobic001G475600 Sobic001G475600 Sobic002G242600--Sobic001G475600 Sobic002G242600--Sobic006G248200 Sobic006G025700 Sobic006G025700 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic008G130700 Sobic008G130700 Sobic002G190100--Sobic008G130700 Sobic002G190100--Sobic002G242600 Sobic002G190100--Sobic001G027600 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic001G120000 Sobic001G120000 Sobic002G190100--Sobic001G120000 Sobic001G042301--Sobic001G206200 Sobic007G023300 Sobic007G023300 Sobic001G042301--Sobic007G023300 Sobic001G407900 Sobic001G407900 Sobic001G042301--Sobic001G407900 Sobic004G193400 Sobic004G193400 Sobic001G042301--Sobic004G193400 Sobic001G042301--Sobic004G234200 Sobic008G117400 Sobic008G117400 Sobic001G042301--Sobic008G117400 Sobic002G414400 Sobic002G414400 Sobic001G042301--Sobic002G414400 Sobic001G065500 Sobic001G065500 Sobic001G042301--Sobic001G065500 Sobic002G338000 Sobic002G338000 Sobic001G042301--Sobic002G338000 Sobic004G191200--Sobic001G027600 Sobic006G280050 Sobic006G280050 Sobic004G191200--Sobic006G280050 Sobic003G202300 Sobic003G202300 Sobic004G191200--Sobic003G202300 Sobic001G191000 Sobic001G191000 Sobic004G191200--Sobic001G191000 Sobic004G317900 Sobic004G317900 Sobic004G191200--Sobic004G317900 Sobic001G453300 Sobic001G453300 Sobic004G191200--Sobic001G453300 Sobic007G034500 Sobic007G034500 Sobic004G191200--Sobic007G034500 Sobic003G246400 Sobic003G246400 Sobic004G191200--Sobic003G246400 Sobic002G305700 Sobic002G305700 Sobic004G191200--Sobic002G305700
Octagon: transcription factors


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