Gene annotation
Transcriptome id Sobic.004G224700.1
Synonym SCPL34, Sb04g026900
Functional annotation OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5XY68
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF31
NCBI CDD -
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT5G23210 : serine carboxypeptidase-like 34
RAP-DB (Rice) LOC_Os02g42310.1 : OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a029806 , Zm00025a015672 , Zm00025a021035 , Zm00025a021039 , Zm00025a049742 , Zm00025a032080
Brachypodium KQK19241 , KQK19240 , KQK17647 , KQK00468 , KQK00467 , PNT69112
Barley HORVU2Hr1G023420.1 , HORVU6Hr1G059550.4 , HORVU6Hr1G059550.5 , HORVU6Hr1G059550.6 , HORVU6Hr1G059550.7 , HORVU6Hr1G059550.1 , HORVU6Hr1G059550.2 , HORVU6Hr1G059550.3 , HORVU6Hr1G059550.8 , HORVU6Hr1G059550.9 , HORVU1Hr1G018710.2 , HORVU1Hr1G018710.3 , HORVU1Hr1G018710.1 , HORVU1Hr1G018710.4 , HORVU2Hr1G023420.5 , HORVU2Hr1G023420.4 , HORVU2Hr1G023420.7 , HORVU2Hr1G023420.6 , HORVU2Hr1G023420.3 , HORVU2Hr1G023420.2 , HORVU2Hr1G023420.8 , HORVU6Hr1G059550.16 , HORVU6Hr1G059550.17 , HORVU6Hr1G059550.14 , HORVU6Hr1G059550.15 , HORVU6Hr1G059550.12 , HORVU6Hr1G059550.13 , HORVU6Hr1G059550.10 , HORVU6Hr1G059550.11 , HORVU7Hr1G031020.3 , HORVU7Hr1G031020.2 , HORVU7Hr1G031020.6 , HORVU7Hr1G031020.5 , HORVU7Hr1G031020.4
Wheat TraesCS1D02G087700 , TraesCS1D02G087700 , TraesCS5B02G242600 , TraesCS7D02G152800 , TraesCS7D02G152800 , TraesCS7B02G054900 , TraesCS7B02G054900 , TraesCS1B02G104500 , TraesCS2B02G157000 , TraesCS5B02G242600 , TraesCS7A02G150900 , TraesCS7A02G507800 , TraesCS1D02G087600 , TraesCS2D02G135500 , TraesCS5A02G245000 , TraesCS6B02G388600 , TraesCS2D02G372500 , TraesCS6B02G261700 , TraesCS6B02G261700 , TraesCS5D02G251700 , TraesCS7B02G301600 , TraesCS6A02G220200 , TraesCS6D02G215000 , TraesCS4B02G013700 , TraesCS7D02G395300 , TraesCS5D02G251300 , TraesCS7B02G416000 , TraesCS2A02G133500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G126100 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
2 Sobic.001G042301 - -
3 Sobic.006G100900 cytokinin-O-glucosyltransferase 2, putative, expressed -
4 Sobic.004G114800 expressed protein -
5 Sobic.004G234200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
6 Sobic.006G248200 - -
7 Sobic.001G206200 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed K00218: protochlorophyllide reductase
8 Sobic.002G328900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.004G068300 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
10 Sobic.002G030200 Photosystem II subunit P(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
11 Sobic.004G193400 photosystem II 5 kDa protein, chloroplast precursor, putative, expressed -
12 Sobic.003G055300 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
13 Sobic.002G414400 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
14 Sobic.009G091800 -(PubMedID : 29017446)@PTAC16, putative, expressed -
15 Sobic.008G117400 OsGrx_C11 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
16 Sobic.010G000500 Plastocyanin(PubMedID : 26186930)@plastocyanin, chloroplast precursor, putative, expressed K02638: plastocyanin
17 Sobic.007G029300 acyl-activating enzyme 14, putative, expressed K14760: acyl-activating enzyme 14
18 Sobic.006G264201 - K08917: light-harvesting complex II chlorophyll a/b binding protein 6
19 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
20 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase


Gene co-expression network
sample Sobic004G224700 Sobic004G224700 Sobic010G126100 Sobic010G126100 Sobic004G224700--Sobic010G126100 Sobic001G042301 Sobic001G042301 Sobic004G224700--Sobic001G042301 Sobic006G100900 Sobic006G100900 Sobic004G224700--Sobic006G100900 Sobic004G114800 Sobic004G114800 Sobic004G224700--Sobic004G114800 Sobic004G234200 Sobic004G234200 Sobic004G224700--Sobic004G234200 Sobic006G248200 Sobic006G248200 Sobic004G224700--Sobic006G248200 Sobic001G206200 Sobic001G206200 Sobic004G224700--Sobic001G206200 Sobic002G328900 Sobic002G328900 Sobic004G224700--Sobic002G328900 Sobic004G068300 Sobic004G068300 Sobic004G224700--Sobic004G068300 Sobic010G126100--Sobic006G100900 Sobic010G126100--Sobic004G224700 Sobic003G305300 Sobic003G305300 Sobic010G126100--Sobic003G305300 Sobic008G064601 Sobic008G064601 Sobic010G126100--Sobic008G064601 Sobic006G060700 Sobic006G060700 Sobic010G126100--Sobic006G060700 Sobic002G242600 Sobic002G242600 Sobic010G126100--Sobic002G242600 Sobic002G190100 Sobic002G190100 Sobic010G126100--Sobic002G190100 Sobic010G126100--Sobic001G042301 Sobic004G191200 Sobic004G191200 Sobic010G126100--Sobic004G191200 Sobic001G042301--Sobic001G206200 Sobic007G023300 Sobic007G023300 Sobic001G042301--Sobic007G023300 Sobic001G407900 Sobic001G407900 Sobic001G042301--Sobic001G407900 Sobic004G193400 Sobic004G193400 Sobic001G042301--Sobic004G193400 Sobic001G042301--Sobic004G234200 Sobic008G117400 Sobic008G117400 Sobic001G042301--Sobic008G117400 Sobic002G414400 Sobic002G414400 Sobic001G042301--Sobic002G414400 Sobic001G065500 Sobic001G065500 Sobic001G042301--Sobic001G065500 Sobic002G338000 Sobic002G338000 Sobic001G042301--Sobic002G338000 Sobic006G100900--Sobic004G114800 Sobic001G203000 Sobic001G203000 Sobic006G100900--Sobic001G203000 Sobic001G382100 Sobic001G382100 Sobic006G100900--Sobic001G382100 Sobic006G100900--Sobic004G234200 Sobic008G051000 Sobic008G051000 Sobic006G100900--Sobic008G051000 Sobic009G091800 Sobic009G091800 Sobic006G100900--Sobic009G091800 Sobic004G238500 Sobic004G238500 Sobic006G100900--Sobic004G238500 Sobic007G116950 Sobic007G116950 Sobic006G100900--Sobic007G116950 Sobic002G297300 Sobic002G297300 Sobic006G100900--Sobic002G297300 Sobic004G114800--Sobic001G203000 Sobic004G114800--Sobic004G234200 Sobic004G114800--Sobic006G100900 Sobic004G114800--Sobic008G051000 Sobic004G114800--Sobic009G091800 Sobic004G114800--Sobic007G116950 Sobic004G114800--Sobic001G382100 Sobic004G114800--Sobic002G328900 Sobic004G114800--Sobic004G238500 Sobic004G234200--Sobic009G091800 Sobic010G022100 Sobic010G022100 Sobic004G234200--Sobic010G022100 Sobic004G234200--Sobic002G297300 Sobic004G234200--Sobic004G193400 Sobic002G288300 Sobic002G288300 Sobic004G234200--Sobic002G288300 Sobic004G234200--Sobic008G051000 Sobic004G234200--Sobic002G414400 Sobic010G000500 Sobic010G000500 Sobic004G234200--Sobic010G000500 Sobic004G234200--Sobic004G114800 Sobic003G386300 Sobic003G386300 Sobic006G248200--Sobic003G386300 Sobic001G240000 Sobic001G240000 Sobic006G248200--Sobic001G240000 Sobic001G531200 Sobic001G531200 Sobic006G248200--Sobic001G531200 Sobic002G198600 Sobic002G198600 Sobic006G248200--Sobic002G198600 Sobic003G030900 Sobic003G030900 Sobic006G248200--Sobic003G030900 Sobic001G475600 Sobic001G475600 Sobic006G248200--Sobic001G475600 Sobic004G054500 Sobic004G054500 Sobic006G248200--Sobic004G054500 Sobic002G305700 Sobic002G305700 Sobic006G248200--Sobic002G305700 Sobic004G311100 Sobic004G311100 Sobic006G248200--Sobic004G311100 Sobic001G206200--Sobic002G338000 Sobic003G055300 Sobic003G055300 Sobic001G206200--Sobic003G055300 Sobic001G206200--Sobic010G000500 Sobic001G206200--Sobic002G414400 Sobic002G030200 Sobic002G030200 Sobic001G206200--Sobic002G030200 Sobic009G234600 Sobic009G234600 Sobic001G206200--Sobic009G234600 Sobic001G206200--Sobic004G234200 Sobic001G046900 Sobic001G046900 Sobic001G206200--Sobic001G046900 Sobic002G329600 Sobic002G329600 Sobic001G206200--Sobic002G329600 Sobic002G328900--Sobic004G114800 Sobic003G300500 Sobic003G300500 Sobic002G328900--Sobic003G300500 Sobic002G328900--Sobic004G193400 Sobic004G105800 Sobic004G105800 Sobic002G328900--Sobic004G105800 Sobic002G328900--Sobic004G234200 Sobic001G017000 Sobic001G017000 Sobic002G328900--Sobic001G017000 Sobic008G112300 Sobic008G112300 Sobic002G328900--Sobic008G112300 Sobic004G317900 Sobic004G317900 Sobic002G328900--Sobic004G317900 Sobic002G328900--Sobic006G100900 Sobic004G068300--Sobic004G234200 Sobic001G041800 Sobic001G041800 Sobic004G068300--Sobic001G041800 Sobic004G068300--Sobic002G030200 Sobic004G068300--Sobic001G531200 Sobic004G068300--Sobic008G117400 Sobic004G068300--Sobic003G030900 Sobic006G222700 Sobic006G222700 Sobic004G068300--Sobic006G222700 Sobic004G068300--Sobic010G022100 Sobic004G068300--Sobic001G206200
Octagon: transcription factors


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