Gene annotation
Transcriptome id Sobic.010G164500.1
Synonym PDF1, Sb10g021810
Functional annotation meiosis 5, putative, expressed
UniProt C5Z4J0
Pfam -
Panther DB PTHR33210 PTHR33210:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42840 : protodermal factor 1
RAP-DB (Rice) LOC_Os06g35970.1 : meiosis 5, putative, expressed
MaizeGDB (Corn) Zm00025a051075 , Zm00025a042336
Brachypodium KQK18030
Barley HORVU7Hr1G088880.5 , HORVU7Hr1G088890.2 , HORVU7Hr1G088890.3 , HORVU7Hr1G088890.1 , HORVU7Hr1G088880.3
Wheat TraesCS7A02G355400 , TraesCS7D02G367600 , TraesCS7D02G367600
Populus -


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cDNA sequences
Sobic.010G164500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G010000 OsSCP6 - Putative Serine Carboxypeptidase homologue, expressed K09645: vitellogenic carboxypeptidase-like protein
2 Sobic.006G110700 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.006G140300 expressed protein -
4 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
5 Sobic.004G218000 SET domain containing protein, expressed -
6 Sobic.003G217300 zinc finger, C3HC4 type family protein, expressed -
7 Sobic.002G123100 alpha-galactosidase precursor, putative, expressed K07407: E3.2.1.22B, galA, alpha-galactosidase
8 Sobic.004G157100 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
9 Sobic.003G176375 - -
10 Sobic.010G037600 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.008G078000 EDM2, putative, expressed -
12 Sobic.004G064000 WAX2, putative, expressed -
13 Sobic.002G221100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
15 Sobic.003G217500 expressed protein -
16 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase
17 Sobic.006G177000 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
18 Sobic.006G192800 expressed protein -
19 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -
20 Sobic.008G176300 YABBY domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G164500 Sobic010G164500 Sobic004G010000 Sobic004G010000 Sobic010G164500--Sobic004G010000 Sobic006G110700 Sobic006G110700 Sobic010G164500--Sobic006G110700 Sobic006G140300 Sobic006G140300 Sobic010G164500--Sobic006G140300 Sobic004G014100 Sobic004G014100 Sobic010G164500--Sobic004G014100 Sobic004G218000 Sobic004G218000 Sobic010G164500--Sobic004G218000 Sobic003G217300 Sobic003G217300 Sobic010G164500--Sobic003G217300 Sobic002G123100 Sobic002G123100 Sobic010G164500--Sobic002G123100 Sobic004G157100 Sobic004G157100 Sobic010G164500--Sobic004G157100 Sobic003G176375 Sobic003G176375 Sobic010G164500--Sobic003G176375 Sobic005G186400 Sobic005G186400 Sobic004G010000--Sobic005G186400 Sobic001G458400 Sobic001G458400 Sobic004G010000--Sobic001G458400 Sobic007G191200 Sobic007G191200 Sobic004G010000--Sobic007G191200 Sobic002G115900 Sobic002G115900 Sobic004G010000--Sobic002G115900 Sobic008G069000 Sobic008G069000 Sobic004G010000--Sobic008G069000 Sobic010G029800 Sobic010G029800 Sobic004G010000--Sobic010G029800 Sobic006G143300 Sobic006G143300 Sobic004G010000--Sobic006G143300 Sobic002G238900 Sobic002G238900 Sobic004G010000--Sobic002G238900 Sobic008G181200 Sobic008G181200 Sobic004G010000--Sobic008G181200 Sobic003G022900 Sobic003G022900 Sobic006G110700--Sobic003G022900 Sobic006G177000 Sobic006G177000 Sobic006G110700--Sobic006G177000 Sobic002G341700 Sobic002G341700 Sobic006G110700--Sobic002G341700 Sobic003G078400 Sobic003G078400 Sobic006G110700--Sobic003G078400 Sobic006G066400 Sobic006G066400 Sobic006G110700--Sobic006G066400 Sobic010G212700 Sobic010G212700 Sobic006G110700--Sobic010G212700 Sobic010G024000 Sobic010G024000 Sobic006G110700--Sobic010G024000 Sobic003G343200 Sobic003G343200 Sobic006G110700--Sobic003G343200 Sobic010G222800 Sobic010G222800 Sobic006G110700--Sobic010G222800 Sobic006G140300--Sobic004G014100 Sobic009G254000 Sobic009G254000 Sobic006G140300--Sobic009G254000 Sobic010G180200 Sobic010G180200 Sobic006G140300--Sobic010G180200 Sobic003G217500 Sobic003G217500 Sobic006G140300--Sobic003G217500 Sobic007G023600 Sobic007G023600 Sobic006G140300--Sobic007G023600 Sobic006G140300--Sobic006G066400 Sobic006G200901 Sobic006G200901 Sobic006G140300--Sobic006G200901 Sobic001G423300 Sobic001G423300 Sobic006G140300--Sobic001G423300 Sobic004G250600 Sobic004G250600 Sobic006G140300--Sobic004G250600 Sobic002G343000 Sobic002G343000 Sobic004G014100--Sobic002G343000 Sobic004G014100--Sobic006G200901 Sobic005G160200 Sobic005G160200 Sobic004G014100--Sobic005G160200 Sobic004G014100--Sobic006G143300 Sobic004G014100--Sobic003G343200 Sobic002G349000 Sobic002G349000 Sobic004G014100--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic004G014100--Sobic006G140300 Sobic004G218000--Sobic003G217300 Sobic007G056900 Sobic007G056900 Sobic004G218000--Sobic007G056900 Sobic005G164800 Sobic005G164800 Sobic004G218000--Sobic005G164800 Sobic004G218000--Sobic002G349000 Sobic002G221100 Sobic002G221100 Sobic004G218000--Sobic002G221100 Sobic005G041900 Sobic005G041900 Sobic004G218000--Sobic005G041900 Sobic004G218000--Sobic003G022900 Sobic009G042600 Sobic009G042600 Sobic004G218000--Sobic009G042600 Sobic004G218000--Sobic010G180200 Sobic003G217300--Sobic004G218000 Sobic003G217300--Sobic005G164800 Sobic003G217300--Sobic007G056900 Sobic010G067200 Sobic010G067200 Sobic003G217300--Sobic010G067200 Sobic003G217300--Sobic005G041900 Sobic003G217300--Sobic009G042600 Sobic002G259301 Sobic002G259301 Sobic003G217300--Sobic002G259301 Sobic003G217300--Sobic002G221100 Sobic007G193300 Sobic007G193300 Sobic003G217300--Sobic007G193300 Sobic001G150300 Sobic001G150300 Sobic002G123100--Sobic001G150300 Sobic004G354600 Sobic004G354600 Sobic002G123100--Sobic004G354600 Sobic007G167300 Sobic007G167300 Sobic002G123100--Sobic007G167300 Sobic001G401975 Sobic001G401975 Sobic002G123100--Sobic001G401975 Sobic001G394900 Sobic001G394900 Sobic002G123100--Sobic001G394900 Sobic003G101200 Sobic003G101200 Sobic002G123100--Sobic003G101200 Sobic003G331100 Sobic003G331100 Sobic002G123100--Sobic003G331100 Sobic001G359700 Sobic001G359700 Sobic002G123100--Sobic001G359700 Sobic001G324800 Sobic001G324800 Sobic002G123100--Sobic001G324800 Sobic004G157100--Sobic002G349000 Sobic001G085200 Sobic001G085200 Sobic004G157100--Sobic001G085200 Sobic004G157100--Sobic002G230400 Sobic008G174500 Sobic008G174500 Sobic004G157100--Sobic008G174500 Sobic004G157100--Sobic004G014100 Sobic003G142200 Sobic003G142200 Sobic004G157100--Sobic003G142200 Sobic004G157100--Sobic006G143300 Sobic004G157100--Sobic002G221100 Sobic004G157100--Sobic002G354800 Sobic007G088700 Sobic007G088700 Sobic003G176375--Sobic007G088700 Sobic007G116766 Sobic007G116766 Sobic003G176375--Sobic007G116766 Sobic003G176375--Sobic003G142200 Sobic003G027000 Sobic003G027000 Sobic003G176375--Sobic003G027000 Sobic003G176375--Sobic005G041900 Sobic003G176375--Sobic003G217300 Sobic003G176375--Sobic004G218000 Sobic003G090000 Sobic003G090000 Sobic003G176375--Sobic003G090000 Sobic006G062600 Sobic006G062600 Sobic003G176375--Sobic006G062600
Octagon: transcription factors


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