Gene annotation
Transcriptome id Sobic.010G195901.1
Synonym -
Functional annotation -
UniProt A0A1W0VTY4
Pfam PF00643
Panther DB PTHR31832 PTHR31832:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005622intracellular


Orthologs (automatic annotation)
TAIR AT2G24790 : CONSTANS-like 3
RAP-DB (Rice) LOC_Os06g45040.1 : B-box zinc finger family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G153500 ankyrin repeat family protein, putative, expressed -
2 Sobic.001G055400 WRKY6, expressed -
3 Sobic.001G261448 - -
4 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
5 Sobic.007G021700 carrier, putative, expressed -
6 Sobic.001G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@secretory protein, putative, expressed -
7 Sobic.001G161000 AGG2, putative, expressed -
8 Sobic.005G036900 RCLEA6 - Root cap and Late embryogenesis related family protein precursor, expressed -
9 Sobic.004G065400 "GW6(Ortholog in rice:Song et al., 2015)"(PubMedID : 31659877)@HLS, putative, expressed -
10 Sobic.010G241800 - -
11 Sobic.007G087600 homeobox domain containing protein, expressed -
12 Sobic.010G204200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
13 Sobic.003G143100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
14 Sobic.005G066600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
16 Sobic.009G150600 expressed protein -
17 Sobic.010G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
18 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
19 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.005G170100 phosphoesterase family protein, putative, expressed K01114: phospholipase C


Gene co-expression network
sample Sobic010G195901 Sobic010G195901 Sobic009G153500 Sobic009G153500 Sobic010G195901--Sobic009G153500 Sobic001G055400 Sobic001G055400 Sobic010G195901--Sobic001G055400 Sobic001G261448 Sobic001G261448 Sobic010G195901--Sobic001G261448 Sobic008G011700 Sobic008G011700 Sobic010G195901--Sobic008G011700 Sobic007G021700 Sobic007G021700 Sobic010G195901--Sobic007G021700 Sobic001G209300 Sobic001G209300 Sobic010G195901--Sobic001G209300 Sobic001G161000 Sobic001G161000 Sobic010G195901--Sobic001G161000 Sobic005G036900 Sobic005G036900 Sobic010G195901--Sobic005G036900 Sobic004G065400 Sobic004G065400 Sobic010G195901--Sobic004G065400 Sobic002G155700 Sobic002G155700 Sobic009G153500--Sobic002G155700 Sobic004G021400 Sobic004G021400 Sobic009G153500--Sobic004G021400 Sobic007G087400 Sobic007G087400 Sobic009G153500--Sobic007G087400 Sobic004G232600 Sobic004G232600 Sobic009G153500--Sobic004G232600 Sobic003G205600 Sobic003G205600 Sobic009G153500--Sobic003G205600 Sobic004G160500 Sobic004G160500 Sobic009G153500--Sobic004G160500 Sobic002G096900 Sobic002G096900 Sobic009G153500--Sobic002G096900 Sobic001G348800 Sobic001G348800 Sobic009G153500--Sobic001G348800 Sobic010G230300 Sobic010G230300 Sobic009G153500--Sobic010G230300 Sobic003G203600 Sobic003G203600 Sobic001G055400--Sobic003G203600 Sobic001G067100 Sobic001G067100 Sobic001G055400--Sobic001G067100 Sobic006G028400 Sobic006G028400 Sobic001G055400--Sobic006G028400 Sobic003G182200 Sobic003G182200 Sobic001G055400--Sobic003G182200 Sobic002G185800 Sobic002G185800 Sobic001G055400--Sobic002G185800 Sobic003G426500 Sobic003G426500 Sobic001G055400--Sobic003G426500 Sobic001G055400--Sobic008G011700 Sobic006G183900 Sobic006G183900 Sobic001G055400--Sobic006G183900 Sobic007G090472 Sobic007G090472 Sobic001G055400--Sobic007G090472 Sobic007G087600 Sobic007G087600 Sobic001G261448--Sobic007G087600 Sobic003G185300 Sobic003G185300 Sobic001G261448--Sobic003G185300 Sobic005G115300 Sobic005G115300 Sobic001G261448--Sobic005G115300 Sobic004G312200 Sobic004G312200 Sobic001G261448--Sobic004G312200 Sobic004G248500 Sobic004G248500 Sobic001G261448--Sobic004G248500 Sobic001G464300 Sobic001G464300 Sobic001G261448--Sobic001G464300 Sobic001G261448--Sobic001G055400 Sobic001G261448--Sobic003G203600 Sobic001G261448--Sobic001G348800 Sobic007G100700 Sobic007G100700 Sobic008G011700--Sobic007G100700 Sobic008G011700--Sobic003G426500 Sobic008G011700--Sobic001G067100 Sobic008G011700--Sobic003G182200 Sobic010G066800 Sobic010G066800 Sobic008G011700--Sobic010G066800 Sobic002G255000 Sobic002G255000 Sobic008G011700--Sobic002G255000 Sobic003G349400 Sobic003G349400 Sobic008G011700--Sobic003G349400 Sobic003G140700 Sobic003G140700 Sobic008G011700--Sobic003G140700 Sobic004G306900 Sobic004G306900 Sobic008G011700--Sobic004G306900 Sobic003G059000 Sobic003G059000 Sobic007G021700--Sobic003G059000 Sobic003G228600 Sobic003G228600 Sobic007G021700--Sobic003G228600 Sobic010G088800 Sobic010G088800 Sobic007G021700--Sobic010G088800 Sobic003G399600 Sobic003G399600 Sobic007G021700--Sobic003G399600 Sobic001G318300 Sobic001G318300 Sobic007G021700--Sobic001G318300 Sobic004G038700 Sobic004G038700 Sobic007G021700--Sobic004G038700 Sobic001G542000 Sobic001G542000 Sobic007G021700--Sobic001G542000 Sobic010G241800 Sobic010G241800 Sobic007G021700--Sobic010G241800 Sobic001G231900 Sobic001G231900 Sobic007G021700--Sobic001G231900 Sobic001G209300--Sobic010G241800 Sobic010G168400 Sobic010G168400 Sobic001G209300--Sobic010G168400 Sobic001G209300--Sobic003G426500 Sobic001G209300--Sobic007G100700 Sobic001G209300--Sobic003G203600 Sobic004G119800 Sobic004G119800 Sobic001G209300--Sobic004G119800 Sobic001G209300--Sobic008G011700 Sobic001G209300--Sobic003G182200 Sobic001G209300--Sobic001G067100 Sobic004G024100 Sobic004G024100 Sobic001G161000--Sobic004G024100 Sobic006G197100 Sobic006G197100 Sobic001G161000--Sobic006G197100 Sobic001G147900 Sobic001G147900 Sobic001G161000--Sobic001G147900 Sobic001G161000--Sobic002G185800 Sobic007G165400 Sobic007G165400 Sobic001G161000--Sobic007G165400 Sobic003G079400 Sobic003G079400 Sobic001G161000--Sobic003G079400 Sobic003G368600 Sobic003G368600 Sobic001G161000--Sobic003G368600 Sobic001G082600 Sobic001G082600 Sobic001G161000--Sobic001G082600 Sobic007G176000 Sobic007G176000 Sobic001G161000--Sobic007G176000 Sobic010G021700 Sobic010G021700 Sobic005G036900--Sobic010G021700 Sobic002G391200 Sobic002G391200 Sobic005G036900--Sobic002G391200 Sobic001G301400 Sobic001G301400 Sobic005G036900--Sobic001G301400 Sobic002G307900 Sobic002G307900 Sobic005G036900--Sobic002G307900 Sobic003G269900 Sobic003G269900 Sobic005G036900--Sobic003G269900 Sobic001G212451 Sobic001G212451 Sobic005G036900--Sobic001G212451 Sobic005G036900--Sobic001G464300 Sobic010G174100 Sobic010G174100 Sobic005G036900--Sobic010G174100 Sobic005G036900--Sobic007G087600 Sobic001G111300 Sobic001G111300 Sobic004G065400--Sobic001G111300 Sobic006G150100 Sobic006G150100 Sobic004G065400--Sobic006G150100 Sobic003G269600 Sobic003G269600 Sobic004G065400--Sobic003G269600 Sobic010G158400 Sobic010G158400 Sobic004G065400--Sobic010G158400 Sobic004G065400--Sobic003G349400 Sobic004G065400--Sobic004G248500 Sobic004G110700 Sobic004G110700 Sobic004G065400--Sobic004G110700 Sobic004G351200 Sobic004G351200 Sobic004G065400--Sobic004G351200 Sobic004G065400--Sobic003G182200
Octagon: transcription factors


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