Gene annotation
Transcriptome id Sobic.003G143100.1
Synonym SRG1, Sb03g012370, ATSRG1
Functional annotation flavonol synthase/flavanone 3-hydroxylase, putative, expressed
UniProt C5XI48
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF204
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G17020 : senescence-related gene 1
RAP-DB (Rice) LOC_Os10g40880.1 : flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a024266
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G022100 carrier, putative, expressed -
2 Sobic.001G318300 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.004G110700 DNA binding protein, putative, expressed -
4 Sobic.006G274933 - -
5 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
6 Sobic.001G055400 WRKY6, expressed -
7 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
8 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.005G127400 expressed protein -
10 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
12 Sobic.001G062500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
13 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
14 Sobic.007G090460 - K08235: xyloglucan:xyloglucosyl transferase
15 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
16 Sobic.003G140700 peroxidase precursor, putative, expressed -
17 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
18 Sobic.003G349400 expressed protein -
19 Sobic.003G097300 - -
20 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic003G143100 Sobic003G143100 Sobic007G022100 Sobic007G022100 Sobic003G143100--Sobic007G022100 Sobic001G318300 Sobic001G318300 Sobic003G143100--Sobic001G318300 Sobic004G110700 Sobic004G110700 Sobic003G143100--Sobic004G110700 Sobic006G274933 Sobic006G274933 Sobic003G143100--Sobic006G274933 Sobic003G269600 Sobic003G269600 Sobic003G143100--Sobic003G269600 Sobic001G055400 Sobic001G055400 Sobic003G143100--Sobic001G055400 Sobic008G011700 Sobic008G011700 Sobic003G143100--Sobic008G011700 Sobic003G121100 Sobic003G121100 Sobic003G143100--Sobic003G121100 Sobic005G127400 Sobic005G127400 Sobic003G143100--Sobic005G127400 Sobic007G022100--Sobic003G143100 Sobic005G036900 Sobic005G036900 Sobic007G022100--Sobic005G036900 Sobic010G158400 Sobic010G158400 Sobic007G022100--Sobic010G158400 Sobic010G139100 Sobic010G139100 Sobic007G022100--Sobic010G139100 Sobic003G215350 Sobic003G215350 Sobic007G022100--Sobic003G215350 Sobic004G209450 Sobic004G209450 Sobic007G022100--Sobic004G209450 Sobic009G032900 Sobic009G032900 Sobic007G022100--Sobic009G032900 Sobic003G269900 Sobic003G269900 Sobic007G022100--Sobic003G269900 Sobic010G115000 Sobic010G115000 Sobic007G022100--Sobic010G115000 Sobic003G132400 Sobic003G132400 Sobic001G318300--Sobic003G132400 Sobic002G329200 Sobic002G329200 Sobic001G318300--Sobic002G329200 Sobic001G318300--Sobic005G127400 Sobic003G059000 Sobic003G059000 Sobic001G318300--Sobic003G059000 Sobic006G150100 Sobic006G150100 Sobic001G318300--Sobic006G150100 Sobic006G225500 Sobic006G225500 Sobic001G318300--Sobic006G225500 Sobic003G349400 Sobic003G349400 Sobic001G318300--Sobic003G349400 Sobic006G170600 Sobic006G170600 Sobic001G318300--Sobic006G170600 Sobic009G035900 Sobic009G035900 Sobic001G318300--Sobic009G035900 Sobic006G028500 Sobic006G028500 Sobic004G110700--Sobic006G028500 Sobic004G110700--Sobic003G269600 Sobic004G110700--Sobic006G150100 Sobic003G140700 Sobic003G140700 Sobic004G110700--Sobic003G140700 Sobic002G003700 Sobic002G003700 Sobic004G110700--Sobic002G003700 Sobic004G322100 Sobic004G322100 Sobic004G110700--Sobic004G322100 Sobic004G110700--Sobic005G127400 Sobic001G229000 Sobic001G229000 Sobic004G110700--Sobic001G229000 Sobic006G019700 Sobic006G019700 Sobic004G110700--Sobic006G019700 Sobic002G183700 Sobic002G183700 Sobic006G274933--Sobic002G183700 Sobic003G311800 Sobic003G311800 Sobic006G274933--Sobic003G311800 Sobic006G274933--Sobic003G269600 Sobic006G274933--Sobic003G140700 Sobic002G361200 Sobic002G361200 Sobic006G274933--Sobic002G361200 Sobic001G062500 Sobic001G062500 Sobic006G274933--Sobic001G062500 Sobic003G399600 Sobic003G399600 Sobic006G274933--Sobic003G399600 Sobic006G274933--Sobic006G225500 Sobic006G274933--Sobic003G121100 Sobic003G269600--Sobic004G110700 Sobic003G269600--Sobic003G399600 Sobic003G269600--Sobic006G274933 Sobic003G269600--Sobic006G150100 Sobic003G269600--Sobic002G183700 Sobic010G106500 Sobic010G106500 Sobic003G269600--Sobic010G106500 Sobic003G269600--Sobic003G121100 Sobic003G269600--Sobic003G140700 Sobic003G269600--Sobic006G170600 Sobic003G203600 Sobic003G203600 Sobic001G055400--Sobic003G203600 Sobic001G067100 Sobic001G067100 Sobic001G055400--Sobic001G067100 Sobic006G028400 Sobic006G028400 Sobic001G055400--Sobic006G028400 Sobic003G182200 Sobic003G182200 Sobic001G055400--Sobic003G182200 Sobic002G185800 Sobic002G185800 Sobic001G055400--Sobic002G185800 Sobic003G426500 Sobic003G426500 Sobic001G055400--Sobic003G426500 Sobic001G055400--Sobic008G011700 Sobic006G183900 Sobic006G183900 Sobic001G055400--Sobic006G183900 Sobic007G090472 Sobic007G090472 Sobic001G055400--Sobic007G090472 Sobic007G100700 Sobic007G100700 Sobic008G011700--Sobic007G100700 Sobic008G011700--Sobic003G426500 Sobic008G011700--Sobic001G067100 Sobic008G011700--Sobic003G182200 Sobic010G066800 Sobic010G066800 Sobic008G011700--Sobic010G066800 Sobic002G255000 Sobic002G255000 Sobic008G011700--Sobic002G255000 Sobic008G011700--Sobic003G349400 Sobic008G011700--Sobic003G140700 Sobic004G306900 Sobic004G306900 Sobic008G011700--Sobic004G306900 Sobic003G121100--Sobic002G183700 Sobic003G121100--Sobic004G110700 Sobic003G121100--Sobic006G225500 Sobic003G121100--Sobic003G140700 Sobic003G121100--Sobic003G269600 Sobic003G121100--Sobic003G311800 Sobic003G121100--Sobic006G170600 Sobic003G121100--Sobic003G399600 Sobic003G121100--Sobic006G274933 Sobic003G064800 Sobic003G064800 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic009G186500 Sobic009G186500 Sobic005G127400--Sobic009G186500 Sobic010G234500 Sobic010G234500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700
Octagon: transcription factors


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