Gene annotation
Transcriptome id Sobic.010G240200.1
Synonym
Functional annotation -
UniProt A0A194YL44
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
2 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
3 Sobic.007G161400 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
K13348: protein Mpv17
4 Sobic.008G158200 - -
5 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.010G272300 cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed -
7 Sobic.002G185800 transporter, putative, expressed -
8 Sobic.010G070000 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
9 Sobic.002G185600 transporter, putative, expressed -
10 Sobic.010G102500 expressed protein -
11 Sobic.005G043000 heat shock protein-related, putative, expressed -
12 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.003G441500 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
14 Sobic.001G302500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
15 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
17 Sobic.003G060200 expressed protein -
18 Sobic.007G144700 receptor-like protein kinase precursor, putative, expressed -
19 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
20 Sobic.003G363900 glycosyl hydrolase, putative, expressed K01183: chitinase


Gene co-expression network
sample Sobic010G240200 Sobic010G240200 Sobic007G170300 Sobic007G170300 Sobic010G240200--Sobic007G170300 Sobic003G280400 Sobic003G280400 Sobic010G240200--Sobic003G280400 Sobic007G161400 Sobic007G161400 Sobic010G240200--Sobic007G161400 Sobic008G158200 Sobic008G158200 Sobic010G240200--Sobic008G158200 Sobic008G144600 Sobic008G144600 Sobic010G240200--Sobic008G144600 Sobic010G272300 Sobic010G272300 Sobic010G240200--Sobic010G272300 Sobic002G185800 Sobic002G185800 Sobic010G240200--Sobic002G185800 Sobic010G070000 Sobic010G070000 Sobic010G240200--Sobic010G070000 Sobic002G185600 Sobic002G185600 Sobic010G240200--Sobic002G185600 Sobic007G015200 Sobic007G015200 Sobic007G170300--Sobic007G015200 Sobic002G101400 Sobic002G101400 Sobic007G170300--Sobic002G101400 Sobic005G046700 Sobic005G046700 Sobic007G170300--Sobic005G046700 Sobic003G203600 Sobic003G203600 Sobic007G170300--Sobic003G203600 Sobic006G028400 Sobic006G028400 Sobic007G170300--Sobic006G028400 Sobic006G183900 Sobic006G183900 Sobic007G170300--Sobic006G183900 Sobic007G073000 Sobic007G073000 Sobic007G170300--Sobic007G073000 Sobic007G170300--Sobic002G185800 Sobic003G287200 Sobic003G287200 Sobic007G170300--Sobic003G287200 Sobic003G280400--Sobic007G161400 Sobic006G059700 Sobic006G059700 Sobic003G280400--Sobic006G059700 Sobic010G110800 Sobic010G110800 Sobic003G280400--Sobic010G110800 Sobic007G204700 Sobic007G204700 Sobic003G280400--Sobic007G204700 Sobic003G280400--Sobic010G272300 Sobic001G264000 Sobic001G264000 Sobic003G280400--Sobic001G264000 Sobic005G065900 Sobic005G065900 Sobic003G280400--Sobic005G065900 Sobic006G197100 Sobic006G197100 Sobic003G280400--Sobic006G197100 Sobic006G256900 Sobic006G256900 Sobic003G280400--Sobic006G256900 Sobic007G161400--Sobic003G280400 Sobic008G128900 Sobic008G128900 Sobic007G161400--Sobic008G128900 Sobic007G161400--Sobic006G059700 Sobic004G042000 Sobic004G042000 Sobic007G161400--Sobic004G042000 Sobic005G043000 Sobic005G043000 Sobic007G161400--Sobic005G043000 Sobic007G078100 Sobic007G078100 Sobic007G161400--Sobic007G078100 Sobic002G312900 Sobic002G312900 Sobic007G161400--Sobic002G312900 Sobic003G363800 Sobic003G363800 Sobic007G161400--Sobic003G363800 Sobic004G051700 Sobic004G051700 Sobic007G161400--Sobic004G051700 Sobic008G158200--Sobic010G272300 Sobic001G082600 Sobic001G082600 Sobic008G158200--Sobic001G082600 Sobic008G158200--Sobic005G043000 Sobic005G063300 Sobic005G063300 Sobic008G158200--Sobic005G063300 Sobic003G079400 Sobic003G079400 Sobic008G158200--Sobic003G079400 Sobic007G215900 Sobic007G215900 Sobic008G158200--Sobic007G215900 Sobic005G168800 Sobic005G168800 Sobic008G158200--Sobic005G168800 Sobic008G158200--Sobic006G059700 Sobic001G243600 Sobic001G243600 Sobic008G158200--Sobic001G243600 Sobic001G487400 Sobic001G487400 Sobic008G144600--Sobic001G487400 Sobic006G150700 Sobic006G150700 Sobic008G144600--Sobic006G150700 Sobic002G213600 Sobic002G213600 Sobic008G144600--Sobic002G213600 Sobic003G016100 Sobic003G016100 Sobic008G144600--Sobic003G016100 Sobic003G363900 Sobic003G363900 Sobic008G144600--Sobic003G363900 Sobic001G039200 Sobic001G039200 Sobic008G144600--Sobic001G039200 Sobic001G340400 Sobic001G340400 Sobic008G144600--Sobic001G340400 Sobic008G144600--Sobic003G079400 Sobic002G093700 Sobic002G093700 Sobic008G144600--Sobic002G093700 Sobic010G272300--Sobic010G110800 Sobic010G272300--Sobic006G059700 Sobic001G147900 Sobic001G147900 Sobic010G272300--Sobic001G147900 Sobic010G272300--Sobic005G043000 Sobic010G272300--Sobic003G280400 Sobic010G272300--Sobic006G256900 Sobic010G272300--Sobic001G082600 Sobic003G011600 Sobic003G011600 Sobic010G272300--Sobic003G011600 Sobic003G404600 Sobic003G404600 Sobic010G272300--Sobic003G404600 Sobic002G185800--Sobic005G046700 Sobic004G139300 Sobic004G139300 Sobic002G185800--Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic002G185800--Sobic002G216100 Sobic002G185800--Sobic006G197100 Sobic002G185800--Sobic001G264000 Sobic007G178900 Sobic007G178900 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic002G185800--Sobic006G256900 Sobic007G176000 Sobic007G176000 Sobic002G185800--Sobic007G176000 Sobic009G071300 Sobic009G071300 Sobic010G070000--Sobic009G071300 Sobic005G202400 Sobic005G202400 Sobic010G070000--Sobic005G202400 Sobic002G326500 Sobic002G326500 Sobic010G070000--Sobic002G326500 Sobic010G102500 Sobic010G102500 Sobic010G070000--Sobic010G102500 Sobic005G041200 Sobic005G041200 Sobic010G070000--Sobic005G041200 Sobic005G224300 Sobic005G224300 Sobic010G070000--Sobic005G224300 Sobic010G070000--Sobic006G150700 Sobic003G060200 Sobic003G060200 Sobic010G070000--Sobic003G060200 Sobic001G256000 Sobic001G256000 Sobic010G070000--Sobic001G256000 Sobic002G185600--Sobic007G170300 Sobic002G195600 Sobic002G195600 Sobic002G185600--Sobic002G195600 Sobic004G312200 Sobic004G312200 Sobic002G185600--Sobic004G312200 Sobic002G185600--Sobic007G073000 Sobic005G046801 Sobic005G046801 Sobic002G185600--Sobic005G046801 Sobic008G138900 Sobic008G138900 Sobic002G185600--Sobic008G138900 Sobic006G229100 Sobic006G229100 Sobic002G185600--Sobic006G229100 Sobic004G322000 Sobic004G322000 Sobic002G185600--Sobic004G322000 Sobic005G067300 Sobic005G067300 Sobic002G185600--Sobic005G067300
Octagon: transcription factors


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