Gene annotation
Transcriptome id Sobic.010G244000.2,Sobic.010G244000.1
Synonym Sb10g028350
Functional annotation expressed protein
UniProt A0A194YL66 , C5Z8R2
Pfam -
Panther DB PTHR14873 PTHR14873:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39910 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os06g47900.1 : expressed protein
MaizeGDB (Corn) Zm00025a018274
Brachypodium -
Barley HORVU7Hr1G098610.5 , HORVU7Hr1G098610.4 , HORVU7Hr1G098610.7 , HORVU7Hr1G098610.6 , HORVU7Hr1G098610.1 , HORVU7Hr1G098610.3 , HORVU7Hr1G098610.2 , HORVU7Hr1G098610.9 , HORVU7Hr1G098610.8 , HORVU7Hr1G098610.11 , HORVU7Hr1G098610.10 , HORVU7Hr1G098610.13 , HORVU7Hr1G098610.12
Wheat TraesCS7B02G330000 , TraesCS7D02G422000 , TraesCS7B02G328900 , TraesCS7D02G421000 , TraesCS7A02G430100 , TraesCS7D02G421000 , TraesCS7A02G428700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G173700 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
2 Sobic.004G177400 T-complex protein 11, putative, expressed -
3 Sobic.008G024550 - -
4 Sobic.008G064900 growth regulator related protein, putative, expressed -
5 Sobic.003G378500 expressed protein -
6 Sobic.004G032500 membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.001G520200 glycosylphosphatidylinositol anchor biosynthesis protein 11, putative, expressed K05287: GPI ethanolamine phosphate transferase 2/3 subunit F
8 Sobic.004G302550 - -
9 Sobic.006G222650 - -
10 Sobic.010G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.009G038800 SLD5 - Putative GINS complex subunit, expressed K10735: GINS4, GINS complex subunit 4
12 Sobic.004G302400 NAC domain containing protein, putative, expressed -
13 Sobic.007G119300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
14 Sobic.006G162300 expressed protein -
15 Sobic.010G035300 WRKY73, expressed -
16 Sobic.002G038200 deoxyribonuclease tatD, putative, expressed K03424: TatD DNase family protein
17 Sobic.002G065300 OsSub58 - Putative Subtilisin homologue, expressed -
18 Sobic.001G541166 - -
19 Sobic.004G019700 expressed protein -
20 Sobic.005G091400 - -


Gene co-expression network
sample Sobic010G244000 Sobic010G244000 Sobic008G173700 Sobic008G173700 Sobic010G244000--Sobic008G173700 Sobic004G177400 Sobic004G177400 Sobic010G244000--Sobic004G177400 Sobic008G024550 Sobic008G024550 Sobic010G244000--Sobic008G024550 Sobic008G064900 Sobic008G064900 Sobic010G244000--Sobic008G064900 Sobic003G378500 Sobic003G378500 Sobic010G244000--Sobic003G378500 Sobic004G032500 Sobic004G032500 Sobic010G244000--Sobic004G032500 Sobic001G520200 Sobic001G520200 Sobic010G244000--Sobic001G520200 Sobic004G302550 Sobic004G302550 Sobic010G244000--Sobic004G302550 Sobic006G222650 Sobic006G222650 Sobic010G244000--Sobic006G222650 Sobic008G173700--Sobic004G177400 Sobic008G173700--Sobic004G302550 Sobic008G173700--Sobic008G064900 Sobic005G091400 Sobic005G091400 Sobic008G173700--Sobic005G091400 Sobic001G541166 Sobic001G541166 Sobic008G173700--Sobic001G541166 Sobic008G173700--Sobic006G222650 Sobic005G001600 Sobic005G001600 Sobic008G173700--Sobic005G001600 Sobic008G112400 Sobic008G112400 Sobic008G173700--Sobic008G112400 Sobic004G211501 Sobic004G211501 Sobic008G173700--Sobic004G211501 Sobic004G177400--Sobic004G302550 Sobic004G177400--Sobic008G173700 Sobic004G177400--Sobic006G222650 Sobic004G302400 Sobic004G302400 Sobic004G177400--Sobic004G302400 Sobic010G035300 Sobic010G035300 Sobic004G177400--Sobic010G035300 Sobic002G065300 Sobic002G065300 Sobic004G177400--Sobic002G065300 Sobic004G177400--Sobic004G211501 Sobic004G177400--Sobic005G091400 Sobic004G177400--Sobic008G064900 Sobic008G024550--Sobic010G244000 Sobic008G024550--Sobic001G520200 Sobic001G163000 Sobic001G163000 Sobic008G024550--Sobic001G163000 Sobic001G344450 Sobic001G344450 Sobic008G024550--Sobic001G344450 Sobic009G038800 Sobic009G038800 Sobic008G024550--Sobic009G038800 Sobic009G039300 Sobic009G039300 Sobic008G024550--Sobic009G039300 Sobic005G002500 Sobic005G002500 Sobic008G024550--Sobic005G002500 Sobic009G215350 Sobic009G215350 Sobic008G024550--Sobic009G215350 Sobic002G038200 Sobic002G038200 Sobic008G024550--Sobic002G038200 Sobic008G064900--Sobic004G302550 Sobic008G064900--Sobic008G173700 Sobic008G064900--Sobic004G177400 Sobic002G426650 Sobic002G426650 Sobic008G064900--Sobic002G426650 Sobic008G064900--Sobic003G378500 Sobic002G188000 Sobic002G188000 Sobic008G064900--Sobic002G188000 Sobic008G064900--Sobic005G091400 Sobic008G064900--Sobic008G112400 Sobic008G064900--Sobic001G541166 Sobic004G019700 Sobic004G019700 Sobic003G378500--Sobic004G019700 Sobic003G378500--Sobic008G064900 Sobic003G378500--Sobic008G173700 Sobic008G019466 Sobic008G019466 Sobic003G378500--Sobic008G019466 Sobic001G124500 Sobic001G124500 Sobic003G378500--Sobic001G124500 Sobic003G378500--Sobic004G177400 Sobic008G013700 Sobic008G013700 Sobic003G378500--Sobic008G013700 Sobic004G192001 Sobic004G192001 Sobic003G378500--Sobic004G192001 Sobic003G378500--Sobic002G188000 Sobic006G019901 Sobic006G019901 Sobic004G032500--Sobic006G019901 Sobic004G032500--Sobic010G035300 Sobic007G174100 Sobic007G174100 Sobic004G032500--Sobic007G174100 Sobic006G162300 Sobic006G162300 Sobic004G032500--Sobic006G162300 Sobic007G161450 Sobic007G161450 Sobic004G032500--Sobic007G161450 Sobic006G222800 Sobic006G222800 Sobic004G032500--Sobic006G222800 Sobic009G031300 Sobic009G031300 Sobic004G032500--Sobic009G031300 Sobic002G116300 Sobic002G116300 Sobic004G032500--Sobic002G116300 Sobic004G032500--Sobic009G039300 Sobic009G250000 Sobic009G250000 Sobic001G520200--Sobic009G250000 Sobic001G520200--Sobic002G038200 Sobic010G150000 Sobic010G150000 Sobic001G520200--Sobic010G150000 Sobic001G520200--Sobic001G124500 Sobic010G178700 Sobic010G178700 Sobic001G520200--Sobic010G178700 Sobic006G142700 Sobic006G142700 Sobic001G520200--Sobic006G142700 Sobic001G520200--Sobic009G038800 Sobic001G520200--Sobic008G013700 Sobic004G125701 Sobic004G125701 Sobic001G520200--Sobic004G125701 Sobic004G302550--Sobic004G177400 Sobic004G302550--Sobic006G222650 Sobic004G302550--Sobic005G091400 Sobic004G302550--Sobic004G302400 Sobic004G302550--Sobic008G173700 Sobic004G302550--Sobic002G065300 Sobic004G302550--Sobic004G211501 Sobic004G269500 Sobic004G269500 Sobic004G302550--Sobic004G269500 Sobic004G302550--Sobic010G035300 Sobic006G222650--Sobic004G302400 Sobic006G222650--Sobic010G035300 Sobic006G222650--Sobic002G116300 Sobic006G146400 Sobic006G146400 Sobic006G222650--Sobic006G146400 Sobic006G222650--Sobic004G269500 Sobic006G280900 Sobic006G280900 Sobic006G222650--Sobic006G280900 Sobic006G222650--Sobic004G302550 Sobic006G222650--Sobic006G162300 Sobic006G222650--Sobic002G065300
Octagon: transcription factors


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