Gene annotation
Transcriptome id Sobic.010G256300.1
Synonym Sb10g029350
Functional annotation acanthoscurrin-1 precursor, putative, expressed
UniProt A0A1W0VUR6
Pfam -
Panther DB PTHR33333 PTHR33333:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61412 : -
RAP-DB (Rice) LOC_Os06g49290.1 : acanthoscurrin-1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a038497
Brachypodium KQK13261 , KQK17469
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G032600 verticillium wilt disease resistance protein, putative, expressed -
2 Sobic.004G164650 - -
3 Sobic.004G286900 - -
4 Sobic.007G121400 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
5 Sobic.002G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
6 Sobic.004G043400 DNA binding protein, putative, expressed -
7 Sobic.007G115000 - -
8 Sobic.002G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
9 Sobic.008G182400 thaumatin, putative, expressed -
10 Sobic.004G197100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
11 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.004G104500 PPR repeat domain containing protein, putative, expressed -
13 Sobic.008G068400 - -
14 Sobic.010G208500 - -
15 Sobic.002G022900 OsWAK92 - OsWAK receptor-like protein kinase, expressed K04730: interleukin-1 receptor-associated kinase 1
16 Sobic.008G168600 SET domain containing protein, expressed -
17 Sobic.003G424100 sulfotransferase domain containing protein, expressed -
18 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
19 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
20 Sobic.005G101850 - -


Gene co-expression network
sample Sobic010G256300 Sobic010G256300 Sobic007G032600 Sobic007G032600 Sobic010G256300--Sobic007G032600 Sobic004G164650 Sobic004G164650 Sobic010G256300--Sobic004G164650 Sobic004G286900 Sobic004G286900 Sobic010G256300--Sobic004G286900 Sobic007G121400 Sobic007G121400 Sobic010G256300--Sobic007G121400 Sobic002G065600 Sobic002G065600 Sobic010G256300--Sobic002G065600 Sobic004G043400 Sobic004G043400 Sobic010G256300--Sobic004G043400 Sobic007G115000 Sobic007G115000 Sobic010G256300--Sobic007G115000 Sobic002G065500 Sobic002G065500 Sobic010G256300--Sobic002G065500 Sobic008G182400 Sobic008G182400 Sobic010G256300--Sobic008G182400 Sobic002G022900 Sobic002G022900 Sobic007G032600--Sobic002G022900 Sobic007G032600--Sobic002G065600 Sobic007G032600--Sobic002G065500 Sobic004G197100 Sobic004G197100 Sobic007G032600--Sobic004G197100 Sobic007G032600--Sobic007G121400 Sobic007G032600--Sobic008G182400 Sobic007G032600--Sobic004G164650 Sobic010G172800 Sobic010G172800 Sobic007G032600--Sobic010G172800 Sobic005G126100 Sobic005G126100 Sobic007G032600--Sobic005G126100 Sobic004G164650--Sobic007G115000 Sobic002G285200 Sobic002G285200 Sobic004G164650--Sobic002G285200 Sobic005G212600 Sobic005G212600 Sobic004G164650--Sobic005G212600 Sobic004G076732 Sobic004G076732 Sobic004G164650--Sobic004G076732 Sobic001G253100 Sobic001G253100 Sobic004G164650--Sobic001G253100 Sobic008G108900 Sobic008G108900 Sobic004G164650--Sobic008G108900 Sobic004G195700 Sobic004G195700 Sobic004G164650--Sobic004G195700 Sobic006G132200 Sobic006G132200 Sobic004G164650--Sobic006G132200 Sobic003G424100 Sobic003G424100 Sobic004G164650--Sobic003G424100 Sobic008G068800 Sobic008G068800 Sobic004G286900--Sobic008G068800 Sobic004G286900--Sobic007G121400 Sobic009G059600 Sobic009G059600 Sobic004G286900--Sobic009G059600 Sobic004G286900--Sobic007G115000 Sobic007G142050 Sobic007G142050 Sobic004G286900--Sobic007G142050 Sobic004G286900--Sobic003G424100 Sobic004G164600 Sobic004G164600 Sobic004G286900--Sobic004G164600 Sobic003G128600 Sobic003G128600 Sobic004G286900--Sobic003G128600 Sobic004G286900--Sobic004G076732 Sobic007G121400--Sobic004G286900 Sobic010G208500 Sobic010G208500 Sobic007G121400--Sobic010G208500 Sobic007G121400--Sobic004G076732 Sobic007G121400--Sobic005G212600 Sobic007G121400--Sobic004G164600 Sobic009G109101 Sobic009G109101 Sobic007G121400--Sobic009G109101 Sobic007G121400--Sobic001G253100 Sobic008G031350 Sobic008G031350 Sobic007G121400--Sobic008G031350 Sobic008G009500 Sobic008G009500 Sobic007G121400--Sobic008G009500 Sobic002G065600--Sobic002G065500 Sobic002G065600--Sobic008G182400 Sobic002G065800 Sobic002G065800 Sobic002G065600--Sobic002G065800 Sobic002G065700 Sobic002G065700 Sobic002G065600--Sobic002G065700 Sobic002G065600--Sobic005G126100 Sobic002G065600--Sobic004G197100 Sobic010G231000 Sobic010G231000 Sobic002G065600--Sobic010G231000 Sobic002G065600--Sobic010G172800 Sobic006G117400 Sobic006G117400 Sobic002G065600--Sobic006G117400 Sobic010G221700 Sobic010G221700 Sobic004G043400--Sobic010G221700 Sobic003G035332 Sobic003G035332 Sobic004G043400--Sobic003G035332 Sobic002G099401 Sobic002G099401 Sobic004G043400--Sobic002G099401 Sobic007G038432 Sobic007G038432 Sobic004G043400--Sobic007G038432 Sobic001G310166 Sobic001G310166 Sobic004G043400--Sobic001G310166 Sobic009G113200 Sobic009G113200 Sobic004G043400--Sobic009G113200 Sobic004G043400--Sobic002G065600 Sobic007G115000--Sobic005G212600 Sobic007G115000--Sobic002G285200 Sobic007G115000--Sobic001G253100 Sobic008G091900 Sobic008G091900 Sobic007G115000--Sobic008G091900 Sobic007G115000--Sobic006G132200 Sobic002G062300 Sobic002G062300 Sobic007G115000--Sobic002G062300 Sobic007G115000--Sobic004G164650 Sobic008G036500 Sobic008G036500 Sobic007G115000--Sobic008G036500 Sobic005G117801 Sobic005G117801 Sobic007G115000--Sobic005G117801 Sobic002G065500--Sobic002G065600 Sobic002G065500--Sobic008G182400 Sobic002G065500--Sobic002G065800 Sobic002G065500--Sobic005G126100 Sobic002G065500--Sobic004G197100 Sobic001G099400 Sobic001G099400 Sobic002G065500--Sobic001G099400 Sobic002G065500--Sobic002G065700 Sobic002G065500--Sobic010G172800 Sobic002G065500--Sobic010G231000 Sobic008G182400--Sobic002G065500 Sobic008G182400--Sobic002G065800 Sobic008G182400--Sobic002G065600 Sobic008G182400--Sobic005G126100 Sobic008G182400--Sobic001G099400 Sobic008G182400--Sobic010G172800 Sobic008G182400--Sobic004G197100 Sobic008G182400--Sobic010G231000 Sobic008G182400--Sobic006G117400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.