Gene annotation
Transcriptome id Sobic.010G265600.1
Synonym Sb10g030090,
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Protein of unknown function (DUF581) (PubMedID : 28640841)
DUF581 domain containing protein, expressed
UniProt C5Z1V0
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44670 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os06g50080.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041722
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G265600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G101800 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed -
2 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
3 Sobic.003G141800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@polygalacturonase, putative, expressed -
4 Sobic.004G283300 AP2 domain containing protein, expressed -
5 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
6 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
7 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
8 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
9 Sobic.010G071700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.009G128300 CUE domain containing protein, expressed -
11 Sobic.002G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
12 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
13 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
17 Sobic.001G075800 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
18 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
19 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
20 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic010G265600 Sobic010G265600 Sobic007G101800 Sobic007G101800 Sobic010G265600--Sobic007G101800 Sobic009G170100 Sobic009G170100 Sobic010G265600--Sobic009G170100 Sobic003G141800 Sobic003G141800 Sobic010G265600--Sobic003G141800 Sobic004G283300 Sobic004G283300 Sobic010G265600--Sobic004G283300 Sobic006G032200 Sobic006G032200 Sobic010G265600--Sobic006G032200 Sobic001G081600 Sobic001G081600 Sobic010G265600--Sobic001G081600 Sobic002G203000 Sobic002G203000 Sobic010G265600--Sobic002G203000 Sobic006G203000 Sobic006G203000 Sobic010G265600--Sobic006G203000 Sobic010G071700 Sobic010G071700 Sobic010G265600--Sobic010G071700 Sobic007G101800--Sobic009G170100 Sobic004G300300 Sobic004G300300 Sobic007G101800--Sobic004G300300 Sobic007G101800--Sobic010G265600 Sobic010G105800 Sobic010G105800 Sobic007G101800--Sobic010G105800 Sobic001G473900 Sobic001G473900 Sobic007G101800--Sobic001G473900 Sobic009G071800 Sobic009G071800 Sobic007G101800--Sobic009G071800 Sobic007G101800--Sobic006G032200 Sobic007G101800--Sobic002G203000 Sobic004G084100 Sobic004G084100 Sobic007G101800--Sobic004G084100 Sobic009G170100--Sobic006G032200 Sobic009G170100--Sobic004G283300 Sobic001G050800 Sobic001G050800 Sobic009G170100--Sobic001G050800 Sobic004G281200 Sobic004G281200 Sobic009G170100--Sobic004G281200 Sobic009G170100--Sobic001G081600 Sobic001G063600 Sobic001G063600 Sobic009G170100--Sobic001G063600 Sobic003G342600 Sobic003G342600 Sobic009G170100--Sobic003G342600 Sobic002G344700 Sobic002G344700 Sobic009G170100--Sobic002G344700 Sobic010G016500 Sobic010G016500 Sobic009G170100--Sobic010G016500 Sobic006G267900 Sobic006G267900 Sobic003G141800--Sobic006G267900 Sobic003G141800--Sobic010G071700 Sobic002G189000 Sobic002G189000 Sobic003G141800--Sobic002G189000 Sobic003G141800--Sobic004G283300 Sobic003G373150 Sobic003G373150 Sobic003G141800--Sobic003G373150 Sobic003G233900 Sobic003G233900 Sobic003G141800--Sobic003G233900 Sobic001G430700 Sobic001G430700 Sobic003G141800--Sobic001G430700 Sobic004G285100 Sobic004G285100 Sobic003G141800--Sobic004G285100 Sobic003G141800--Sobic006G032200 Sobic004G283300--Sobic002G344700 Sobic004G283300--Sobic010G016500 Sobic004G283300--Sobic001G081600 Sobic004G283201 Sobic004G283201 Sobic004G283300--Sobic004G283201 Sobic004G283300--Sobic009G170100 Sobic004G283300--Sobic006G032200 Sobic004G283300--Sobic004G281200 Sobic001G476400 Sobic001G476400 Sobic004G283300--Sobic001G476400 Sobic006G210300 Sobic006G210300 Sobic004G283300--Sobic006G210300 Sobic006G032200--Sobic009G170100 Sobic006G032200--Sobic004G283300 Sobic002G037400 Sobic002G037400 Sobic006G032200--Sobic002G037400 Sobic006G032200--Sobic006G203000 Sobic006G032200--Sobic004G281200 Sobic006G032200--Sobic002G344700 Sobic009G128300 Sobic009G128300 Sobic006G032200--Sobic009G128300 Sobic001G075101 Sobic001G075101 Sobic006G032200--Sobic001G075101 Sobic006G032200--Sobic010G016500 Sobic001G462800 Sobic001G462800 Sobic001G081600--Sobic001G462800 Sobic002G217100 Sobic002G217100 Sobic001G081600--Sobic002G217100 Sobic001G081600--Sobic006G210300 Sobic001G081600--Sobic004G283300 Sobic002G197600 Sobic002G197600 Sobic001G081600--Sobic002G197600 Sobic001G081600--Sobic004G281200 Sobic001G081600--Sobic002G344700 Sobic004G025000 Sobic004G025000 Sobic001G081600--Sobic004G025000 Sobic001G081600--Sobic001G476400 Sobic001G077700 Sobic001G077700 Sobic002G203000--Sobic001G077700 Sobic002G203000--Sobic009G071800 Sobic006G095600 Sobic006G095600 Sobic002G203000--Sobic006G095600 Sobic001G489600 Sobic001G489600 Sobic002G203000--Sobic001G489600 Sobic010G076700 Sobic010G076700 Sobic002G203000--Sobic010G076700 Sobic009G258300 Sobic009G258300 Sobic002G203000--Sobic009G258300 Sobic002G203000--Sobic001G473900 Sobic007G057100 Sobic007G057100 Sobic002G203000--Sobic007G057100 Sobic002G248100 Sobic002G248100 Sobic002G203000--Sobic002G248100 Sobic006G203000--Sobic002G037400 Sobic006G203000--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic006G203000--Sobic007G169600 Sobic002G331450 Sobic002G331450 Sobic006G203000--Sobic002G331450 Sobic003G083000 Sobic003G083000 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G026400 Sobic006G026400 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic002G110200 Sobic002G110200 Sobic006G203000--Sobic002G110200 Sobic010G071700--Sobic003G342600 Sobic010G071700--Sobic003G141800 Sobic010G071700--Sobic001G063600 Sobic010G071700--Sobic009G170100 Sobic003G129400 Sobic003G129400 Sobic010G071700--Sobic003G129400 Sobic009G030200 Sobic009G030200 Sobic010G071700--Sobic009G030200 Sobic005G231700 Sobic005G231700 Sobic010G071700--Sobic005G231700 Sobic010G071700--Sobic010G265600 Sobic010G071700--Sobic006G032200
Octagon: transcription factors


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