Gene annotation
Transcriptome id Sobic.001G026700.1
Synonym Sb01g002540
Functional annotation glucan endo-1,3-beta-glucosidase-related, putative, expressed
UniProt C5WU19
Pfam PF07983
Panther DB PTHR32227 PTHR32227:SF131
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09460 : Carbohydrate-binding X8 domain superfamily protein
RAP-DB (Rice) LOC_Os03g61780.1 : glucan endo-1,3-beta-glucosidase-related, putative, expressed
MaizeGDB (Corn) Zm00025a016391 , Zm00025a008900
Brachypodium KQK12295
Barley HORVU5Hr1G089770.2 , HORVU5Hr1G089770.1 , HORVU5Hr1G117440.1 , HORVU5Hr1G117440.2 , HORVU5Hr1G117440.3 , HORVU5Hr1G117440.4 , HORVU5Hr1G117440.5 , HORVU2Hr1G099430.2 , HORVU2Hr1G099430.1
Wheat TraesCS2A02G425000 , TraesCS5D02G513400 , TraesCS2B02G444800 , TraesCS5B02G366600 , TraesCS4A02G358500 , TraesCS2D02G423000 , TraesCS5A02G365000 , TraesCS5B02G513000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G518300 expressed protein -
2 Sobic.010G010900 expressed protein -
3 Sobic.001G397700 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
4 Sobic.004G259101 - -
5 Sobic.003G300100 bZIP transcription factor domain containing protein, expressed -
6 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
7 Sobic.008G156900 similar to Auxin-responsive protein IAA30(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.001G514400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G267800 thaumatin-like protein 1 precursor, putative, expressed -
10 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
11 Sobic.009G159600 ATROPGEF7/ROPGEF7, putative, expressed -
12 Sobic.003G300200 expressed protein -
13 Sobic.001G488900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
14 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
15 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
16 Sobic.006G201300 expressed protein -
17 Sobic.004G237300 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -
18 Sobic.005G120800 expressed protein -
19 Sobic.002G426900 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
20 Sobic.007G113900 reticulon domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G026700 Sobic001G026700 Sobic001G518300 Sobic001G518300 Sobic001G026700--Sobic001G518300 Sobic010G010900 Sobic010G010900 Sobic001G026700--Sobic010G010900 Sobic001G397700 Sobic001G397700 Sobic001G026700--Sobic001G397700 Sobic004G259101 Sobic004G259101 Sobic001G026700--Sobic004G259101 Sobic003G300100 Sobic003G300100 Sobic001G026700--Sobic003G300100 Sobic001G258100 Sobic001G258100 Sobic001G026700--Sobic001G258100 Sobic008G156900 Sobic008G156900 Sobic001G026700--Sobic008G156900 Sobic001G514400 Sobic001G514400 Sobic001G026700--Sobic001G514400 Sobic001G267800 Sobic001G267800 Sobic001G026700--Sobic001G267800 Sobic001G518300--Sobic001G026700 Sobic002G367300 Sobic002G367300 Sobic001G518300--Sobic002G367300 Sobic004G199700 Sobic004G199700 Sobic001G518300--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic001G518300--Sobic003G174900 Sobic009G259500 Sobic009G259500 Sobic001G518300--Sobic009G259500 Sobic001G361800 Sobic001G361800 Sobic001G518300--Sobic001G361800 Sobic001G518300--Sobic001G514400 Sobic001G518300--Sobic001G258100 Sobic001G518300--Sobic010G010900 Sobic001G488900 Sobic001G488900 Sobic010G010900--Sobic001G488900 Sobic006G272500 Sobic006G272500 Sobic010G010900--Sobic006G272500 Sobic003G309400 Sobic003G309400 Sobic010G010900--Sobic003G309400 Sobic002G419200 Sobic002G419200 Sobic010G010900--Sobic002G419200 Sobic003G300400 Sobic003G300400 Sobic010G010900--Sobic003G300400 Sobic009G172700 Sobic009G172700 Sobic010G010900--Sobic009G172700 Sobic010G010900--Sobic001G267800 Sobic002G032500 Sobic002G032500 Sobic010G010900--Sobic002G032500 Sobic002G071850 Sobic002G071850 Sobic010G010900--Sobic002G071850 Sobic001G397700--Sobic003G300100 Sobic001G397700--Sobic008G156900 Sobic004G107900 Sobic004G107900 Sobic001G397700--Sobic004G107900 Sobic001G409700 Sobic001G409700 Sobic001G397700--Sobic001G409700 Sobic001G098900 Sobic001G098900 Sobic001G397700--Sobic001G098900 Sobic004G133000 Sobic004G133000 Sobic001G397700--Sobic004G133000 Sobic001G397700--Sobic001G026700 Sobic001G244400 Sobic001G244400 Sobic001G397700--Sobic001G244400 Sobic010G215300 Sobic010G215300 Sobic001G397700--Sobic010G215300 Sobic004G259101--Sobic001G258100 Sobic002G072700 Sobic002G072700 Sobic004G259101--Sobic002G072700 Sobic004G154600 Sobic004G154600 Sobic004G259101--Sobic004G154600 Sobic009G159600 Sobic009G159600 Sobic004G259101--Sobic009G159600 Sobic004G259101--Sobic001G267800 Sobic004G259101--Sobic009G259500 Sobic004G259101--Sobic010G010900 Sobic004G259101--Sobic001G514400 Sobic009G248900 Sobic009G248900 Sobic004G259101--Sobic009G248900 Sobic002G279300 Sobic002G279300 Sobic003G300100--Sobic002G279300 Sobic003G300100--Sobic008G156900 Sobic003G300100--Sobic001G397700 Sobic004G115600 Sobic004G115600 Sobic003G300100--Sobic004G115600 Sobic001G331100 Sobic001G331100 Sobic003G300100--Sobic001G331100 Sobic001G253900 Sobic001G253900 Sobic003G300100--Sobic001G253900 Sobic001G458900 Sobic001G458900 Sobic003G300100--Sobic001G458900 Sobic008G083300 Sobic008G083300 Sobic003G300100--Sobic008G083300 Sobic001G451800 Sobic001G451800 Sobic003G300100--Sobic001G451800 Sobic001G258100--Sobic004G259101 Sobic001G258100--Sobic009G259500 Sobic001G258100--Sobic003G174900 Sobic001G258100--Sobic002G072700 Sobic001G258100--Sobic010G010900 Sobic004G168600 Sobic004G168600 Sobic001G258100--Sobic004G168600 Sobic007G142900 Sobic007G142900 Sobic001G258100--Sobic007G142900 Sobic001G258100--Sobic001G267800 Sobic001G258100--Sobic001G514400 Sobic008G156900--Sobic003G300100 Sobic008G156900--Sobic001G451800 Sobic007G113900 Sobic007G113900 Sobic008G156900--Sobic007G113900 Sobic008G156900--Sobic001G253900 Sobic008G156900--Sobic001G397700 Sobic008G156900--Sobic002G279300 Sobic008G156900--Sobic001G331100 Sobic010G234800 Sobic010G234800 Sobic008G156900--Sobic010G234800 Sobic001G496700 Sobic001G496700 Sobic008G156900--Sobic001G496700 Sobic005G121700 Sobic005G121700 Sobic001G514400--Sobic005G121700 Sobic001G514400--Sobic004G259101 Sobic001G514400--Sobic001G258100 Sobic004G247300 Sobic004G247300 Sobic001G514400--Sobic004G247300 Sobic001G514400--Sobic001G409700 Sobic009G099700 Sobic009G099700 Sobic001G514400--Sobic009G099700 Sobic009G061400 Sobic009G061400 Sobic001G514400--Sobic009G061400 Sobic009G021700 Sobic009G021700 Sobic001G514400--Sobic009G021700 Sobic005G054700 Sobic005G054700 Sobic001G514400--Sobic005G054700 Sobic003G300200 Sobic003G300200 Sobic001G267800--Sobic003G300200 Sobic005G129600 Sobic005G129600 Sobic001G267800--Sobic005G129600 Sobic003G113500 Sobic003G113500 Sobic001G267800--Sobic003G113500 Sobic007G189400 Sobic007G189400 Sobic001G267800--Sobic007G189400 Sobic001G267800--Sobic003G309400 Sobic001G267800--Sobic003G300400 Sobic010G078700 Sobic010G078700 Sobic001G267800--Sobic010G078700 Sobic001G267800--Sobic002G072700 Sobic009G141300 Sobic009G141300 Sobic001G267800--Sobic009G141300
Octagon: transcription factors


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