Gene annotation
Transcriptome id Sobic.001G518300.1,Sobic.001G518300.2
Synonym Sb01g048340
Functional annotation expressed protein
UniProt A0A1Z5SBK8 , C5WZV8
Pfam PF14309
Panther DB PTHR20953:SF5 PTHR20953 PTHR20953 PTHR20953:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17550 : -
RAP-DB (Rice) LOC_Os03g03860.1,LOC_Os03g03860.2 : expressed protein
MaizeGDB (Corn) Zm00025a000428
Brachypodium KQK23827
Barley HORVU4Hr1G082200.15 , HORVU4Hr1G082200.10 , HORVU4Hr1G082200.13 , HORVU4Hr1G082200.8 , HORVU4Hr1G082200.9 , HORVU4Hr1G082200.6 , HORVU4Hr1G082200.7 , HORVU4Hr1G082200.4 , HORVU4Hr1G082200.5 , HORVU4Hr1G082200.2 , HORVU4Hr1G082200.3 , HORVU4Hr1G082200.14 , HORVU4Hr1G082200.16 , HORVU4Hr1G082200.17 , HORVU4Hr1G082200.11 , HORVU4Hr1G082200.12 , HORVU4Hr1G082200.18 , HORVU4Hr1G082200.19 , HORVU4Hr1G082200.21 , HORVU4Hr1G082200.20
Wheat TraesCS5A02G497200 , TraesCS5A02G497200 , TraesCS5A02G497200 , TraesCS4B02G324900 , TraesCS4B02G324900 , TraesCS4D02G321800 , TraesCS4D02G321800 , TraesCS4D02G321800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G026700 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
2 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
3 Sobic.004G199700 expressed protein -
4 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
5 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.001G361800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@proline-rich family protein, putative, expressed -
7 Sobic.001G514400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
9 Sobic.010G010900 expressed protein -
10 Sobic.001G184400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR55 - Auxin-responsive SAUR gene family member, expressed -
11 Sobic.004G259101 - -
12 Sobic.004G154600 expressed protein -
13 Sobic.004G205500 expressed protein -
14 Sobic.006G262600 expressed protein -
15 Sobic.009G159600 ATROPGEF7/ROPGEF7, putative, expressed -
16 Sobic.009G099700 - -
17 Sobic.003G300200 expressed protein -
18 Sobic.006G153500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP25 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
19 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
20 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic001G518300 Sobic001G518300 Sobic001G026700 Sobic001G026700 Sobic001G518300--Sobic001G026700 Sobic002G367300 Sobic002G367300 Sobic001G518300--Sobic002G367300 Sobic004G199700 Sobic004G199700 Sobic001G518300--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic001G518300--Sobic003G174900 Sobic009G259500 Sobic009G259500 Sobic001G518300--Sobic009G259500 Sobic001G361800 Sobic001G361800 Sobic001G518300--Sobic001G361800 Sobic001G514400 Sobic001G514400 Sobic001G518300--Sobic001G514400 Sobic001G258100 Sobic001G258100 Sobic001G518300--Sobic001G258100 Sobic010G010900 Sobic010G010900 Sobic001G518300--Sobic010G010900 Sobic001G026700--Sobic001G518300 Sobic001G026700--Sobic010G010900 Sobic001G397700 Sobic001G397700 Sobic001G026700--Sobic001G397700 Sobic004G259101 Sobic004G259101 Sobic001G026700--Sobic004G259101 Sobic003G300100 Sobic003G300100 Sobic001G026700--Sobic003G300100 Sobic001G026700--Sobic001G258100 Sobic008G156900 Sobic008G156900 Sobic001G026700--Sobic008G156900 Sobic001G026700--Sobic001G514400 Sobic001G267800 Sobic001G267800 Sobic001G026700--Sobic001G267800 Sobic006G262600 Sobic006G262600 Sobic002G367300--Sobic006G262600 Sobic010G091700 Sobic010G091700 Sobic002G367300--Sobic010G091700 Sobic001G184400 Sobic001G184400 Sobic002G367300--Sobic001G184400 Sobic009G011500 Sobic009G011500 Sobic002G367300--Sobic009G011500 Sobic003G380500 Sobic003G380500 Sobic002G367300--Sobic003G380500 Sobic004G154600 Sobic004G154600 Sobic002G367300--Sobic004G154600 Sobic002G367300--Sobic004G199700 Sobic002G367300--Sobic003G174900 Sobic004G205500 Sobic004G205500 Sobic002G367300--Sobic004G205500 Sobic004G199700--Sobic009G259500 Sobic002G216600 Sobic002G216600 Sobic004G199700--Sobic002G216600 Sobic004G199700--Sobic003G174900 Sobic004G199700--Sobic001G361800 Sobic002G348700 Sobic002G348700 Sobic004G199700--Sobic002G348700 Sobic002G072700 Sobic002G072700 Sobic004G199700--Sobic002G072700 Sobic005G204100 Sobic005G204100 Sobic004G199700--Sobic005G204100 Sobic007G210900 Sobic007G210900 Sobic004G199700--Sobic007G210900 Sobic004G199700--Sobic004G154600 Sobic003G174900--Sobic004G199700 Sobic003G174900--Sobic002G216600 Sobic003G174900--Sobic009G259500 Sobic003G174900--Sobic001G361800 Sobic003G174900--Sobic001G258100 Sobic003G174900--Sobic005G204100 Sobic003G174900--Sobic002G348700 Sobic008G086200 Sobic008G086200 Sobic003G174900--Sobic008G086200 Sobic003G174900--Sobic004G205500 Sobic009G259500--Sobic005G204100 Sobic009G259500--Sobic002G216600 Sobic009G259500--Sobic004G154600 Sobic009G259500--Sobic002G072700 Sobic009G259500--Sobic004G199700 Sobic007G142900 Sobic007G142900 Sobic009G259500--Sobic007G142900 Sobic009G259500--Sobic001G258100 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic001G361800--Sobic004G199700 Sobic008G148500 Sobic008G148500 Sobic001G361800--Sobic008G148500 Sobic001G361800--Sobic003G174900 Sobic006G272500 Sobic006G272500 Sobic001G361800--Sobic006G272500 Sobic001G361800--Sobic002G072700 Sobic001G361800--Sobic009G259500 Sobic009G175200 Sobic009G175200 Sobic001G361800--Sobic009G175200 Sobic005G054700 Sobic005G054700 Sobic001G361800--Sobic005G054700 Sobic009G124800 Sobic009G124800 Sobic001G361800--Sobic009G124800 Sobic005G121700 Sobic005G121700 Sobic001G514400--Sobic005G121700 Sobic001G514400--Sobic004G259101 Sobic001G514400--Sobic001G258100 Sobic004G247300 Sobic004G247300 Sobic001G514400--Sobic004G247300 Sobic001G409700 Sobic001G409700 Sobic001G514400--Sobic001G409700 Sobic009G099700 Sobic009G099700 Sobic001G514400--Sobic009G099700 Sobic009G061400 Sobic009G061400 Sobic001G514400--Sobic009G061400 Sobic009G021700 Sobic009G021700 Sobic001G514400--Sobic009G021700 Sobic001G514400--Sobic005G054700 Sobic001G258100--Sobic004G259101 Sobic001G258100--Sobic009G259500 Sobic001G258100--Sobic003G174900 Sobic001G258100--Sobic002G072700 Sobic001G258100--Sobic010G010900 Sobic004G168600 Sobic004G168600 Sobic001G258100--Sobic004G168600 Sobic001G258100--Sobic007G142900 Sobic001G258100--Sobic001G267800 Sobic001G258100--Sobic001G514400 Sobic001G488900 Sobic001G488900 Sobic010G010900--Sobic001G488900 Sobic010G010900--Sobic006G272500 Sobic003G309400 Sobic003G309400 Sobic010G010900--Sobic003G309400 Sobic002G419200 Sobic002G419200 Sobic010G010900--Sobic002G419200 Sobic003G300400 Sobic003G300400 Sobic010G010900--Sobic003G300400 Sobic009G172700 Sobic009G172700 Sobic010G010900--Sobic009G172700 Sobic010G010900--Sobic001G267800 Sobic002G032500 Sobic002G032500 Sobic010G010900--Sobic002G032500 Sobic002G071850 Sobic002G071850 Sobic010G010900--Sobic002G071850
Octagon: transcription factors


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