Gene annotation
Transcriptome id Sobic.001G044600.5,Sobic.001G044600.6,Sobic.001G044600.2,Sobic.001G044600.3,Sobic.001G044600.4
Synonym emb1692, Sb01g004110
Functional annotation ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
UniProt C5WW32
Pfam PF11955
Panther DB PTHR31476 PTHR31476:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G62990 : Ubiquitin carboxyl-terminal hydrolase family protein
RAP-DB (Rice) LOC_Os04g24710.1 : ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
MaizeGDB (Corn) Zm00025a016500
Brachypodium PNT62323 , KQJ85793
Barley HORVU4Hr1G035260.1 , HORVU5Hr1G084220.1 , HORVU0Hr1G010020.1 , HORVU0Hr1G010020.2 , HORVU3Hr1G050640.1 , HORVU6Hr1G005100.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G122100 pentatricopeptide, putative, expressed -
2 Sobic.006G101600 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
3 Sobic.006G209700 CAX-interacting protein 4, putative, expressed -
4 Sobic.004G248200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
6 Sobic.001G167800 single-stranded DNA-binding protein, putative, expressed -
7 Sobic.003G137200 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.003G413201 - -
9 Sobic.005G160500 amine oxidase, flavin-containing, domain containing protein, expressed K09835: crtISO, prolycopene isomerase
10 Sobic.002G201300 - -
11 Sobic.006G255200 - -
12 Sobic.007G157700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
13 Sobic.002G287600 expressed protein -
14 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
15 Sobic.003G139700 -(PubMedID : 26465154)@IF, putative, expressed -
16 Sobic.005G017900 OsFBD13 - F-box and FBD domain containing protein, expressed -
17 Sobic.003G174500 - -
18 Sobic.002G273800 cytochrome P450, putative, expressed -
19 Sobic.010G133450 - -
20 Sobic.001G460900 expressed protein -


Gene co-expression network
sample Sobic001G044600 Sobic001G044600 Sobic006G122100 Sobic006G122100 Sobic001G044600--Sobic006G122100 Sobic006G101600 Sobic006G101600 Sobic001G044600--Sobic006G101600 Sobic006G209700 Sobic006G209700 Sobic001G044600--Sobic006G209700 Sobic004G248200 Sobic004G248200 Sobic001G044600--Sobic004G248200 Sobic004G227700 Sobic004G227700 Sobic001G044600--Sobic004G227700 Sobic001G167800 Sobic001G167800 Sobic001G044600--Sobic001G167800 Sobic003G137200 Sobic003G137200 Sobic001G044600--Sobic003G137200 Sobic003G413201 Sobic003G413201 Sobic001G044600--Sobic003G413201 Sobic005G160500 Sobic005G160500 Sobic001G044600--Sobic005G160500 Sobic005G017900 Sobic005G017900 Sobic006G122100--Sobic005G017900 Sobic006G122100--Sobic001G044600 Sobic005G068200 Sobic005G068200 Sobic006G122100--Sobic005G068200 Sobic002G036500 Sobic002G036500 Sobic006G122100--Sobic002G036500 Sobic002G257150 Sobic002G257150 Sobic006G122100--Sobic002G257150 Sobic010G256866 Sobic010G256866 Sobic006G122100--Sobic010G256866 Sobic005G030266 Sobic005G030266 Sobic006G122100--Sobic005G030266 Sobic004G058400 Sobic004G058400 Sobic006G122100--Sobic004G058400 Sobic001G329001 Sobic001G329001 Sobic006G122100--Sobic001G329001 Sobic006G101600--Sobic003G137200 Sobic003G133700 Sobic003G133700 Sobic006G101600--Sobic003G133700 Sobic003G347520 Sobic003G347520 Sobic006G101600--Sobic003G347520 Sobic003G365200 Sobic003G365200 Sobic006G101600--Sobic003G365200 Sobic008G192900 Sobic008G192900 Sobic006G101600--Sobic008G192900 Sobic001G010900 Sobic001G010900 Sobic006G101600--Sobic001G010900 Sobic006G074500 Sobic006G074500 Sobic006G101600--Sobic006G074500 Sobic003G050800 Sobic003G050800 Sobic006G101600--Sobic003G050800 Sobic003G001650 Sobic003G001650 Sobic006G101600--Sobic003G001650 Sobic003G023450 Sobic003G023450 Sobic006G209700--Sobic003G023450 Sobic005G019250 Sobic005G019250 Sobic006G209700--Sobic005G019250 Sobic001G202450 Sobic001G202450 Sobic006G209700--Sobic001G202450 Sobic001G497400 Sobic001G497400 Sobic006G209700--Sobic001G497400 Sobic005G045250 Sobic005G045250 Sobic006G209700--Sobic005G045250 Sobic009G077000 Sobic009G077000 Sobic006G209700--Sobic009G077000 Sobic004G252300 Sobic004G252300 Sobic006G209700--Sobic004G252300 Sobic001G278900 Sobic001G278900 Sobic006G209700--Sobic001G278900 Sobic003G085533 Sobic003G085533 Sobic006G209700--Sobic003G085533 Sobic004G242800 Sobic004G242800 Sobic004G248200--Sobic004G242800 Sobic003G410000 Sobic003G410000 Sobic004G248200--Sobic003G410000 Sobic004G248200--Sobic002G257150 Sobic004G248200--Sobic001G329001 Sobic009G175800 Sobic009G175800 Sobic004G248200--Sobic009G175800 Sobic002G086700 Sobic002G086700 Sobic004G248200--Sobic002G086700 Sobic002G262850 Sobic002G262850 Sobic004G248200--Sobic002G262850 Sobic002G076300 Sobic002G076300 Sobic004G248200--Sobic002G076300 Sobic004G206600 Sobic004G206600 Sobic004G248200--Sobic004G206600 Sobic008G142200 Sobic008G142200 Sobic004G227700--Sobic008G142200 Sobic002G187900 Sobic002G187900 Sobic004G227700--Sobic002G187900 Sobic009G094200 Sobic009G094200 Sobic004G227700--Sobic009G094200 Sobic004G082600 Sobic004G082600 Sobic004G227700--Sobic004G082600 Sobic003G263900 Sobic003G263900 Sobic004G227700--Sobic003G263900 Sobic003G155000 Sobic003G155000 Sobic004G227700--Sobic003G155000 Sobic003G063400 Sobic003G063400 Sobic004G227700--Sobic003G063400 Sobic006G134300 Sobic006G134300 Sobic004G227700--Sobic006G134300 Sobic004G250400 Sobic004G250400 Sobic004G227700--Sobic004G250400 Sobic004G183300 Sobic004G183300 Sobic001G167800--Sobic004G183300 Sobic006G122500 Sobic006G122500 Sobic001G167800--Sobic006G122500 Sobic001G489900 Sobic001G489900 Sobic001G167800--Sobic001G489900 Sobic002G104400 Sobic002G104400 Sobic001G167800--Sobic002G104400 Sobic003G089600 Sobic003G089600 Sobic001G167800--Sobic003G089600 Sobic003G077600 Sobic003G077600 Sobic001G167800--Sobic003G077600 Sobic003G336200 Sobic003G336200 Sobic001G167800--Sobic003G336200 Sobic006G168500 Sobic006G168500 Sobic001G167800--Sobic006G168500 Sobic001G316100 Sobic001G316100 Sobic001G167800--Sobic001G316100 Sobic006G024400 Sobic006G024400 Sobic003G137200--Sobic006G024400 Sobic003G137200--Sobic003G001650 Sobic004G144300 Sobic004G144300 Sobic003G137200--Sobic004G144300 Sobic001G104100 Sobic001G104100 Sobic003G137200--Sobic001G104100 Sobic004G305300 Sobic004G305300 Sobic003G137200--Sobic004G305300 Sobic003G276400 Sobic003G276400 Sobic003G137200--Sobic003G276400 Sobic003G137200--Sobic006G101600 Sobic009G199900 Sobic009G199900 Sobic003G137200--Sobic009G199900 Sobic009G147600 Sobic009G147600 Sobic003G137200--Sobic009G147600 Sobic003G413201--Sobic005G160500 Sobic004G199900 Sobic004G199900 Sobic003G413201--Sobic004G199900 Sobic003G413201--Sobic006G101600 Sobic001G184300 Sobic001G184300 Sobic003G413201--Sobic001G184300 Sobic010G041201 Sobic010G041201 Sobic003G413201--Sobic010G041201 Sobic003G399800 Sobic003G399800 Sobic003G413201--Sobic003G399800 Sobic008G132550 Sobic008G132550 Sobic003G413201--Sobic008G132550 Sobic004G237900 Sobic004G237900 Sobic003G413201--Sobic004G237900 Sobic004G258450 Sobic004G258450 Sobic003G413201--Sobic004G258450 Sobic002G207601 Sobic002G207601 Sobic005G160500--Sobic002G207601 Sobic006G136300 Sobic006G136300 Sobic005G160500--Sobic006G136300 Sobic009G144400 Sobic009G144400 Sobic005G160500--Sobic009G144400 Sobic006G221500 Sobic006G221500 Sobic005G160500--Sobic006G221500 Sobic006G213350 Sobic006G213350 Sobic005G160500--Sobic006G213350 Sobic005G031400 Sobic005G031400 Sobic005G160500--Sobic005G031400 Sobic003G162600 Sobic003G162600 Sobic005G160500--Sobic003G162600 Sobic001G150100 Sobic001G150100 Sobic005G160500--Sobic001G150100 Sobic001G139800 Sobic001G139800 Sobic005G160500--Sobic001G139800
Octagon: transcription factors


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