Gene annotation
Transcriptome id Sobic.002G201300.1
Synonym
Functional annotation -
UniProt C5XCT1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
2 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
3 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
4 Sobic.003G362800 - -
5 Sobic.003G001650 - -
6 Sobic.001G454600 expressed protein -
7 Sobic.009G160100 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
8 Sobic.002G085600 - -
9 Sobic.009G223900 protein binding protein, putative, expressed -
10 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
11 Sobic.006G138300 EF hand family protein, putative, expressed -
12 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
13 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
15 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
16 Sobic.001G019601 - -
17 Sobic.003G040300 cytochrome P450, putative, expressed -
18 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
19 Sobic.004G144300 - -
20 Sobic.009G192933 - -


Gene co-expression network
sample Sobic002G201300 Sobic002G201300 Sobic002G001500 Sobic002G001500 Sobic002G201300--Sobic002G001500 Sobic001G113400 Sobic001G113400 Sobic002G201300--Sobic001G113400 Sobic003G262600 Sobic003G262600 Sobic002G201300--Sobic003G262600 Sobic003G362800 Sobic003G362800 Sobic002G201300--Sobic003G362800 Sobic003G001650 Sobic003G001650 Sobic002G201300--Sobic003G001650 Sobic001G454600 Sobic001G454600 Sobic002G201300--Sobic001G454600 Sobic009G160100 Sobic009G160100 Sobic002G201300--Sobic009G160100 Sobic002G085600 Sobic002G085600 Sobic002G201300--Sobic002G085600 Sobic009G223900 Sobic009G223900 Sobic002G201300--Sobic009G223900 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic004G181000 Sobic004G181000 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic009G208000 Sobic009G208000 Sobic002G001500--Sobic009G208000 Sobic008G103400 Sobic008G103400 Sobic002G001500--Sobic008G103400 Sobic002G001500--Sobic002G085600 Sobic003G155800 Sobic003G155800 Sobic002G001500--Sobic003G155800 Sobic004G173200 Sobic004G173200 Sobic002G001500--Sobic004G173200 Sobic001G113400--Sobic003G362800 Sobic001G113400--Sobic002G001500 Sobic001G113400--Sobic002G085600 Sobic001G113400--Sobic009G208000 Sobic004G144300 Sobic004G144300 Sobic001G113400--Sobic004G144300 Sobic001G113400--Sobic003G155800 Sobic001G113400--Sobic009G223900 Sobic001G113400--Sobic004G181000 Sobic009G192933 Sobic009G192933 Sobic001G113400--Sobic009G192933 Sobic003G155000 Sobic003G155000 Sobic003G262600--Sobic003G155000 Sobic003G262600--Sobic004G173200 Sobic003G253700 Sobic003G253700 Sobic003G262600--Sobic003G253700 Sobic006G249600 Sobic006G249600 Sobic003G262600--Sobic006G249600 Sobic010G000200 Sobic010G000200 Sobic003G262600--Sobic010G000200 Sobic002G187900 Sobic002G187900 Sobic003G262600--Sobic002G187900 Sobic003G365200 Sobic003G365200 Sobic003G262600--Sobic003G365200 Sobic003G262600--Sobic009G223900 Sobic003G262600--Sobic003G362800 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G362800--Sobic003G001650 Sobic003G001650--Sobic003G362800 Sobic004G218400 Sobic004G218400 Sobic003G001650--Sobic004G218400 Sobic008G170800 Sobic008G170800 Sobic003G001650--Sobic008G170800 Sobic010G042300 Sobic010G042300 Sobic003G001650--Sobic010G042300 Sobic003G001650--Sobic001G454600 Sobic003G001650--Sobic002G001500 Sobic008G192900 Sobic008G192900 Sobic003G001650--Sobic008G192900 Sobic003G001650--Sobic008G103400 Sobic003G001650--Sobic004G144300 Sobic001G090700 Sobic001G090700 Sobic001G454600--Sobic001G090700 Sobic001G454600--Sobic008G170800 Sobic002G206900 Sobic002G206900 Sobic001G454600--Sobic002G206900 Sobic003G040300 Sobic003G040300 Sobic001G454600--Sobic003G040300 Sobic001G454600--Sobic003G001650 Sobic001G454600--Sobic004G218400 Sobic001G038700 Sobic001G038700 Sobic001G454600--Sobic001G038700 Sobic006G167400 Sobic006G167400 Sobic001G454600--Sobic006G167400 Sobic001G454600--Sobic003G362800 Sobic009G160100--Sobic003G362800 Sobic009G160100--Sobic002G001500 Sobic009G160100--Sobic003G155800 Sobic009G160100--Sobic009G208000 Sobic009G160100--Sobic004G181000 Sobic009G160100--Sobic001G113400 Sobic006G169600 Sobic006G169600 Sobic009G160100--Sobic006G169600 Sobic009G160100--Sobic010G000200 Sobic003G025300 Sobic003G025300 Sobic009G160100--Sobic003G025300 Sobic002G085600--Sobic001G113400 Sobic002G085600--Sobic002G001500 Sobic002G085600--Sobic009G192933 Sobic002G085600--Sobic003G362800 Sobic001G191300 Sobic001G191300 Sobic002G085600--Sobic001G191300 Sobic004G305300 Sobic004G305300 Sobic002G085600--Sobic004G305300 Sobic002G085600--Sobic009G223900 Sobic002G085600--Sobic004G144300 Sobic002G398600 Sobic002G398600 Sobic002G085600--Sobic002G398600 Sobic009G223900--Sobic002G001500 Sobic009G223900--Sobic004G181000 Sobic009G223900--Sobic003G362800 Sobic009G223900--Sobic003G155800 Sobic009G223900--Sobic002G398600 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic009G223900--Sobic001G113400 Sobic009G223900--Sobic003G262600
Octagon: transcription factors


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