Gene annotation
Transcriptome id Sobic.003G413201.1,Sobic.003G413201.2,Sobic.003G413201.3
Synonym -
Functional annotation -
UniProt A0A1W0W194 , A0A1W0W195 , A0A1W0W1D2
Pfam PF08263 PF00069 PF00069
Panther DB PTHR27000 PTHR27000:SF58
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G08850 : Protein kinase family protein with leucine-rich repeat domain,Leucine-rich repeat receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os10g02990.1,LOC_Os01g33110.1 : leucine-rich repeat receptor-like protein kinase 1, putative, expressed,receptor-like protein kinase 5 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT71940
Barley HORVU5Hr1G047840.6 , HORVU5Hr1G047840.4 , HORVU5Hr1G047840.2 , HORVU5Hr1G047840.3 , HORVU5Hr1G047840.1 , HORVU5Hr1G047840.5
Wheat TraesCS5D02G158000 , TraesCS5A02G152800 , TraesCS1D02G051000 , TraesCS5B02G151600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G160500 amine oxidase, flavin-containing, domain containing protein, expressed K09835: crtISO, prolycopene isomerase
2 Sobic.004G199900 inorganic phosphate transporter 2-1, chloroplast precursor, putative, expressed K14640: SLC20A, solute carrier family 20 (sodium-dependent phosphate transporter)
3 Sobic.006G101600 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
4 Sobic.001G184300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
5 Sobic.010G041201 - -
6 Sobic.003G399800 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
7 Sobic.008G132550 - -
8 Sobic.004G237900 no apical meristem protein, putative, expressed -
9 Sobic.004G258450 - -
10 Sobic.001G010900 OsGrx_S14 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
11 Sobic.006G074500 protein of unknown function DUF1279 domain containing protein, expressed -
12 Sobic.009G235100 GTP-binding protein, putative, expressed K03595: era, GTPase
13 Sobic.003G298000 - -
14 Sobic.010G184201 - -
15 Sobic.003G137200 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.004G051800 - -
17 Sobic.001G245100 - -
18 Sobic.006G122500 methyltransferase domain containing protein, expressed -
19 Sobic.001G494950 - -
20 Sobic.002G107700 - -


Gene co-expression network
sample Sobic003G413201 Sobic003G413201 Sobic005G160500 Sobic005G160500 Sobic003G413201--Sobic005G160500 Sobic004G199900 Sobic004G199900 Sobic003G413201--Sobic004G199900 Sobic006G101600 Sobic006G101600 Sobic003G413201--Sobic006G101600 Sobic001G184300 Sobic001G184300 Sobic003G413201--Sobic001G184300 Sobic010G041201 Sobic010G041201 Sobic003G413201--Sobic010G041201 Sobic003G399800 Sobic003G399800 Sobic003G413201--Sobic003G399800 Sobic008G132550 Sobic008G132550 Sobic003G413201--Sobic008G132550 Sobic004G237900 Sobic004G237900 Sobic003G413201--Sobic004G237900 Sobic004G258450 Sobic004G258450 Sobic003G413201--Sobic004G258450 Sobic002G207601 Sobic002G207601 Sobic005G160500--Sobic002G207601 Sobic006G136300 Sobic006G136300 Sobic005G160500--Sobic006G136300 Sobic009G144400 Sobic009G144400 Sobic005G160500--Sobic009G144400 Sobic006G221500 Sobic006G221500 Sobic005G160500--Sobic006G221500 Sobic006G213350 Sobic006G213350 Sobic005G160500--Sobic006G213350 Sobic005G031400 Sobic005G031400 Sobic005G160500--Sobic005G031400 Sobic003G162600 Sobic003G162600 Sobic005G160500--Sobic003G162600 Sobic001G150100 Sobic001G150100 Sobic005G160500--Sobic001G150100 Sobic001G139800 Sobic001G139800 Sobic005G160500--Sobic001G139800 Sobic002G142350 Sobic002G142350 Sobic004G199900--Sobic002G142350 Sobic002G380150 Sobic002G380150 Sobic004G199900--Sobic002G380150 Sobic008G078500 Sobic008G078500 Sobic004G199900--Sobic008G078500 Sobic010G261500 Sobic010G261500 Sobic004G199900--Sobic010G261500 Sobic004G223350 Sobic004G223350 Sobic004G199900--Sobic004G223350 Sobic003G096400 Sobic003G096400 Sobic004G199900--Sobic003G096400 Sobic004G118300 Sobic004G118300 Sobic004G199900--Sobic004G118300 Sobic007G038200 Sobic007G038200 Sobic004G199900--Sobic007G038200 Sobic008G024700 Sobic008G024700 Sobic004G199900--Sobic008G024700 Sobic003G137200 Sobic003G137200 Sobic006G101600--Sobic003G137200 Sobic003G133700 Sobic003G133700 Sobic006G101600--Sobic003G133700 Sobic003G347520 Sobic003G347520 Sobic006G101600--Sobic003G347520 Sobic003G365200 Sobic003G365200 Sobic006G101600--Sobic003G365200 Sobic008G192900 Sobic008G192900 Sobic006G101600--Sobic008G192900 Sobic001G010900 Sobic001G010900 Sobic006G101600--Sobic001G010900 Sobic006G074500 Sobic006G074500 Sobic006G101600--Sobic006G074500 Sobic003G050800 Sobic003G050800 Sobic006G101600--Sobic003G050800 Sobic003G001650 Sobic003G001650 Sobic006G101600--Sobic003G001650 Sobic009G041400 Sobic009G041400 Sobic001G184300--Sobic009G041400 Sobic004G107500 Sobic004G107500 Sobic001G184300--Sobic004G107500 Sobic001G184300--Sobic003G137200 Sobic001G184300--Sobic003G133700 Sobic004G227600 Sobic004G227600 Sobic001G184300--Sobic004G227600 Sobic001G184300--Sobic006G074500 Sobic001G184300--Sobic006G101600 Sobic001G184300--Sobic003G050800 Sobic001G184300--Sobic010G261500 Sobic004G051800 Sobic004G051800 Sobic010G041201--Sobic004G051800 Sobic005G230600 Sobic005G230600 Sobic010G041201--Sobic005G230600 Sobic003G013400 Sobic003G013400 Sobic010G041201--Sobic003G013400 Sobic002G429200 Sobic002G429200 Sobic010G041201--Sobic002G429200 Sobic009G005750 Sobic009G005750 Sobic010G041201--Sobic009G005750 Sobic002G262500 Sobic002G262500 Sobic010G041201--Sobic002G262500 Sobic002G295550 Sobic002G295550 Sobic010G041201--Sobic002G295550 Sobic002G375600 Sobic002G375600 Sobic010G041201--Sobic002G375600 Sobic004G087900 Sobic004G087900 Sobic010G041201--Sobic004G087900 Sobic003G399800--Sobic004G237900 Sobic003G399800--Sobic004G258450 Sobic001G245100 Sobic001G245100 Sobic003G399800--Sobic001G245100 Sobic009G049100 Sobic009G049100 Sobic003G399800--Sobic009G049100 Sobic002G107700 Sobic002G107700 Sobic003G399800--Sobic002G107700 Sobic004G070150 Sobic004G070150 Sobic003G399800--Sobic004G070150 Sobic007G052000 Sobic007G052000 Sobic003G399800--Sobic007G052000 Sobic003G298000 Sobic003G298000 Sobic003G399800--Sobic003G298000 Sobic003G336300 Sobic003G336300 Sobic003G399800--Sobic003G336300 Sobic001G406200 Sobic001G406200 Sobic008G132550--Sobic001G406200 Sobic006G128150 Sobic006G128150 Sobic008G132550--Sobic006G128150 Sobic003G267600 Sobic003G267600 Sobic008G132550--Sobic003G267600 Sobic008G082550 Sobic008G082550 Sobic008G132550--Sobic008G082550 Sobic009G192400 Sobic009G192400 Sobic008G132550--Sobic009G192400 Sobic007G206400 Sobic007G206400 Sobic008G132550--Sobic007G206400 Sobic008G132550--Sobic007G052000 Sobic001G079150 Sobic001G079150 Sobic008G132550--Sobic001G079150 Sobic008G132550--Sobic004G237900 Sobic004G237900--Sobic003G399800 Sobic004G237900--Sobic004G258450 Sobic004G237900--Sobic001G245100 Sobic004G237900--Sobic002G107700 Sobic004G237900--Sobic008G132550 Sobic010G184201 Sobic010G184201 Sobic004G237900--Sobic010G184201 Sobic004G237900--Sobic004G070150 Sobic004G237900--Sobic009G049100 Sobic001G385132 Sobic001G385132 Sobic004G237900--Sobic001G385132 Sobic004G258450--Sobic004G237900 Sobic004G258450--Sobic003G399800 Sobic004G258450--Sobic003G336300 Sobic001G460150 Sobic001G460150 Sobic004G258450--Sobic001G460150 Sobic004G258450--Sobic009G049100 Sobic004G258450--Sobic003G298000 Sobic004G258450--Sobic002G429200 Sobic004G144300 Sobic004G144300 Sobic004G258450--Sobic004G144300 Sobic004G258450--Sobic004G070150
Octagon: transcription factors


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