Gene annotation
Transcriptome id Sobic.003G137200.1
Synonym auxin/indole-3-acetic acid (Aux/IAA), SbIAA9, Sb03g011680, IAA31
Functional annotation "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment" (PubMedID : 20499123)
OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed
UniProt C5XHZ1
Pfam PF02309
Panther DB PTHR31734 PTHR31734:SF3
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT3G17600 : indole-3-acetic acid inducible 31
RAP-DB (Rice) LOC_Os01g18360.1 : OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) Zm00025a024219
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
2 Sobic.003G001650 - -
3 Sobic.004G144300 - -
4 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
5 Sobic.004G305300 - -
6 Sobic.003G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha-amylase isozime 2 precursor AMY3 (Os)(PubMedID : 27208977)@alpha-amylase precursor, putative, expressed -
7 Sobic.006G101600 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
8 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
9 Sobic.009G147600 pentatricopeptide, putative, expressed -
10 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
11 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
12 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
13 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
14 Sobic.002G085600 - -
15 Sobic.009G192933 - -
16 Sobic.003G362800 - -
17 Sobic.009G049100 - -
18 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.002G320700 expressed protein -
20 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic003G137200 Sobic003G137200 Sobic006G024400 Sobic006G024400 Sobic003G137200--Sobic006G024400 Sobic003G001650 Sobic003G001650 Sobic003G137200--Sobic003G001650 Sobic004G144300 Sobic004G144300 Sobic003G137200--Sobic004G144300 Sobic001G104100 Sobic001G104100 Sobic003G137200--Sobic001G104100 Sobic004G305300 Sobic004G305300 Sobic003G137200--Sobic004G305300 Sobic003G276400 Sobic003G276400 Sobic003G137200--Sobic003G276400 Sobic006G101600 Sobic006G101600 Sobic003G137200--Sobic006G101600 Sobic009G199900 Sobic009G199900 Sobic003G137200--Sobic009G199900 Sobic009G147600 Sobic009G147600 Sobic003G137200--Sobic009G147600 Sobic004G007200 Sobic004G007200 Sobic006G024400--Sobic004G007200 Sobic006G024400--Sobic003G001650 Sobic006G024400--Sobic003G276400 Sobic005G014400 Sobic005G014400 Sobic006G024400--Sobic005G014400 Sobic003G251900 Sobic003G251900 Sobic006G024400--Sobic003G251900 Sobic006G024400--Sobic001G104100 Sobic010G201444 Sobic010G201444 Sobic006G024400--Sobic010G201444 Sobic001G113400 Sobic001G113400 Sobic006G024400--Sobic001G113400 Sobic006G024400--Sobic009G199900 Sobic003G362800 Sobic003G362800 Sobic003G001650--Sobic003G362800 Sobic004G218400 Sobic004G218400 Sobic003G001650--Sobic004G218400 Sobic008G170800 Sobic008G170800 Sobic003G001650--Sobic008G170800 Sobic010G042300 Sobic010G042300 Sobic003G001650--Sobic010G042300 Sobic001G454600 Sobic001G454600 Sobic003G001650--Sobic001G454600 Sobic002G001500 Sobic002G001500 Sobic003G001650--Sobic002G001500 Sobic008G192900 Sobic008G192900 Sobic003G001650--Sobic008G192900 Sobic008G103400 Sobic008G103400 Sobic003G001650--Sobic008G103400 Sobic003G001650--Sobic004G144300 Sobic004G310400 Sobic004G310400 Sobic004G144300--Sobic004G310400 Sobic004G144300--Sobic003G362800 Sobic004G144300--Sobic001G113400 Sobic005G048800 Sobic005G048800 Sobic004G144300--Sobic005G048800 Sobic001G520000 Sobic001G520000 Sobic004G144300--Sobic001G520000 Sobic002G085600 Sobic002G085600 Sobic004G144300--Sobic002G085600 Sobic003G118500 Sobic003G118500 Sobic004G144300--Sobic003G118500 Sobic009G049100 Sobic009G049100 Sobic004G144300--Sobic009G049100 Sobic001G096200 Sobic001G096200 Sobic004G144300--Sobic001G096200 Sobic001G104100--Sobic009G199900 Sobic004G026000 Sobic004G026000 Sobic001G104100--Sobic004G026000 Sobic003G106100 Sobic003G106100 Sobic001G104100--Sobic003G106100 Sobic004G314100 Sobic004G314100 Sobic001G104100--Sobic004G314100 Sobic001G028500 Sobic001G028500 Sobic001G104100--Sobic001G028500 Sobic001G104100--Sobic003G118500 Sobic002G320700 Sobic002G320700 Sobic001G104100--Sobic002G320700 Sobic002G399000 Sobic002G399000 Sobic001G104100--Sobic002G399000 Sobic007G213500 Sobic007G213500 Sobic001G104100--Sobic007G213500 Sobic001G350300 Sobic001G350300 Sobic004G305300--Sobic001G350300 Sobic006G170800 Sobic006G170800 Sobic004G305300--Sobic006G170800 Sobic004G305300--Sobic003G118500 Sobic001G191300 Sobic001G191300 Sobic004G305300--Sobic001G191300 Sobic004G305300--Sobic001G104100 Sobic004G305300--Sobic002G085600 Sobic004G350600 Sobic004G350600 Sobic004G305300--Sobic004G350600 Sobic004G305300--Sobic002G399000 Sobic007G077466 Sobic007G077466 Sobic004G305300--Sobic007G077466 Sobic003G276400--Sobic004G144300 Sobic003G276400--Sobic001G104100 Sobic003G276400--Sobic003G001650 Sobic005G025400 Sobic005G025400 Sobic003G276400--Sobic005G025400 Sobic003G276400--Sobic001G113400 Sobic003G276400--Sobic006G024400 Sobic003G276400--Sobic003G362800 Sobic003G276400--Sobic009G049100 Sobic003G276400--Sobic005G014400 Sobic006G101600--Sobic003G137200 Sobic003G133700 Sobic003G133700 Sobic006G101600--Sobic003G133700 Sobic003G347520 Sobic003G347520 Sobic006G101600--Sobic003G347520 Sobic003G365200 Sobic003G365200 Sobic006G101600--Sobic003G365200 Sobic006G101600--Sobic008G192900 Sobic001G010900 Sobic001G010900 Sobic006G101600--Sobic001G010900 Sobic006G074500 Sobic006G074500 Sobic006G101600--Sobic006G074500 Sobic003G050800 Sobic003G050800 Sobic006G101600--Sobic003G050800 Sobic006G101600--Sobic003G001650 Sobic009G199900--Sobic001G104100 Sobic009G199900--Sobic001G028500 Sobic009G199900--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic009G199900--Sobic004G202750 Sobic009G199900--Sobic004G350600 Sobic004G231501 Sobic004G231501 Sobic009G199900--Sobic004G231501 Sobic009G199900--Sobic004G026000 Sobic003G155800 Sobic003G155800 Sobic009G199900--Sobic003G155800 Sobic009G199900--Sobic004G314100 Sobic009G147600--Sobic004G202750 Sobic009G147600--Sobic001G028500 Sobic001G312801 Sobic001G312801 Sobic009G147600--Sobic001G312801 Sobic004G149000 Sobic004G149000 Sobic009G147600--Sobic004G149000 Sobic009G147600--Sobic002G320700 Sobic009G147600--Sobic001G104100 Sobic003G030200 Sobic003G030200 Sobic009G147600--Sobic003G030200 Sobic009G147600--Sobic005G025400 Sobic004G190800 Sobic004G190800 Sobic009G147600--Sobic004G190800
Octagon: transcription factors


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