Gene annotation
Transcriptome id Sobic.001G086600.1
Synonym Sb01g007800
Functional annotation expressed protein
UniProt C5X095
Pfam -
Panther DB PTHR36335 PTHR36335:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69060 : Chaperone DnaJ-domain superfamily protein
RAP-DB (Rice) LOC_Os03g54150.1 : expressed protein
MaizeGDB (Corn) Zm00025a010271 , Zm00025a008188 , Zm00025a008187
Brachypodium -
Barley -
Wheat TraesCS5A02G391600 , TraesCS5B02G396500 , TraesCS5D02G401400
Populus -


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cDNA sequences
Sobic.001G086600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
2 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -
3 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
4 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
5 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
6 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
7 Sobic.009G228700 expressed protein -
8 Sobic.009G041700 Fibronectin type III domain containing protein, expressed -
9 Sobic.004G117900 expressed protein -
10 Sobic.010G278200 expressed protein -
11 Sobic.003G372500 DUF803 domain containing, putative, expressed -
12 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
13 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
14 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
15 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
16 Sobic.005G105000 STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
17 Sobic.002G352600 expressed protein -
18 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
19 Sobic.007G158300 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
20 Sobic.002G375300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic001G086600 Sobic001G086600 Sobic003G248200 Sobic003G248200 Sobic001G086600--Sobic003G248200 Sobic009G138100 Sobic009G138100 Sobic001G086600--Sobic009G138100 Sobic002G132000 Sobic002G132000 Sobic001G086600--Sobic002G132000 Sobic001G512700 Sobic001G512700 Sobic001G086600--Sobic001G512700 Sobic001G356600 Sobic001G356600 Sobic001G086600--Sobic001G356600 Sobic003G433100 Sobic003G433100 Sobic001G086600--Sobic003G433100 Sobic009G228700 Sobic009G228700 Sobic001G086600--Sobic009G228700 Sobic009G041700 Sobic009G041700 Sobic001G086600--Sobic009G041700 Sobic004G117900 Sobic004G117900 Sobic001G086600--Sobic004G117900 Sobic003G248200--Sobic001G512700 Sobic003G248200--Sobic001G356600 Sobic008G179700 Sobic008G179700 Sobic003G248200--Sobic008G179700 Sobic004G066200 Sobic004G066200 Sobic003G248200--Sobic004G066200 Sobic008G047800 Sobic008G047800 Sobic003G248200--Sobic008G047800 Sobic006G200600 Sobic006G200600 Sobic003G248200--Sobic006G200600 Sobic003G081000 Sobic003G081000 Sobic003G248200--Sobic003G081000 Sobic004G274200 Sobic004G274200 Sobic003G248200--Sobic004G274200 Sobic002G297200 Sobic002G297200 Sobic003G248200--Sobic002G297200 Sobic010G278200 Sobic010G278200 Sobic009G138100--Sobic010G278200 Sobic010G130000 Sobic010G130000 Sobic009G138100--Sobic010G130000 Sobic009G138100--Sobic003G248200 Sobic001G124200 Sobic001G124200 Sobic009G138100--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic009G138100--Sobic006G033200 Sobic009G138100--Sobic009G228700 Sobic009G138100--Sobic004G066200 Sobic009G219000 Sobic009G219000 Sobic009G138100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic009G138100--Sobic001G323000 Sobic004G006200 Sobic004G006200 Sobic002G132000--Sobic004G006200 Sobic004G264400 Sobic004G264400 Sobic002G132000--Sobic004G264400 Sobic007G024700 Sobic007G024700 Sobic002G132000--Sobic007G024700 Sobic004G295800 Sobic004G295800 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic001G290000 Sobic001G290000 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic003G305200 Sobic003G305200 Sobic002G132000--Sobic003G305200 Sobic001G137100 Sobic001G137100 Sobic002G132000--Sobic001G137100 Sobic001G512700--Sobic008G047800 Sobic002G006900 Sobic002G006900 Sobic001G512700--Sobic002G006900 Sobic001G512700--Sobic003G248200 Sobic001G497300 Sobic001G497300 Sobic001G512700--Sobic001G497300 Sobic007G118600 Sobic007G118600 Sobic001G512700--Sobic007G118600 Sobic004G021100 Sobic004G021100 Sobic001G512700--Sobic004G021100 Sobic005G045300 Sobic005G045300 Sobic001G512700--Sobic005G045300 Sobic001G512700--Sobic002G297200 Sobic008G067600 Sobic008G067600 Sobic001G512700--Sobic008G067600 Sobic001G356600--Sobic004G066200 Sobic001G356600--Sobic003G248200 Sobic002G034600 Sobic002G034600 Sobic001G356600--Sobic002G034600 Sobic001G356600--Sobic001G512700 Sobic001G356600--Sobic009G228700 Sobic009G179700 Sobic009G179700 Sobic001G356600--Sobic009G179700 Sobic010G018700 Sobic010G018700 Sobic001G356600--Sobic010G018700 Sobic001G356600--Sobic008G179700 Sobic001G356600--Sobic004G274200 Sobic009G193400 Sobic009G193400 Sobic003G433100--Sobic009G193400 Sobic001G478300 Sobic001G478300 Sobic003G433100--Sobic001G478300 Sobic007G062600 Sobic007G062600 Sobic003G433100--Sobic007G062600 Sobic003G433100--Sobic004G295800 Sobic003G433100--Sobic004G006200 Sobic009G154800 Sobic009G154800 Sobic003G433100--Sobic009G154800 Sobic003G433100--Sobic009G228700 Sobic002G424000 Sobic002G424000 Sobic003G433100--Sobic002G424000 Sobic003G433100--Sobic004G021100 Sobic009G228700--Sobic004G066200 Sobic009G207000 Sobic009G207000 Sobic009G228700--Sobic009G207000 Sobic001G091300 Sobic001G091300 Sobic009G228700--Sobic001G091300 Sobic009G228700--Sobic001G323000 Sobic009G228700--Sobic001G356600 Sobic006G249700 Sobic006G249700 Sobic009G228700--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G228700--Sobic006G148200 Sobic003G312200 Sobic003G312200 Sobic009G228700--Sobic003G312200 Sobic009G228700--Sobic001G124200 Sobic001G114000 Sobic001G114000 Sobic009G041700--Sobic001G114000 Sobic004G321100 Sobic004G321100 Sobic009G041700--Sobic004G321100 Sobic005G177700 Sobic005G177700 Sobic009G041700--Sobic005G177700 Sobic005G138300 Sobic005G138300 Sobic009G041700--Sobic005G138300 Sobic007G218000 Sobic007G218000 Sobic009G041700--Sobic007G218000 Sobic010G243400 Sobic010G243400 Sobic009G041700--Sobic010G243400 Sobic006G167600 Sobic006G167600 Sobic009G041700--Sobic006G167600 Sobic004G067700 Sobic004G067700 Sobic009G041700--Sobic004G067700 Sobic009G124700 Sobic009G124700 Sobic009G041700--Sobic009G124700 Sobic004G117900--Sobic003G248200 Sobic002G350300 Sobic002G350300 Sobic004G117900--Sobic002G350300 Sobic003G131400 Sobic003G131400 Sobic004G117900--Sobic003G131400 Sobic007G019800 Sobic007G019800 Sobic004G117900--Sobic007G019800 Sobic002G262600 Sobic002G262600 Sobic004G117900--Sobic002G262600 Sobic004G117900--Sobic001G512700 Sobic004G117900--Sobic002G297200 Sobic010G240900 Sobic010G240900 Sobic004G117900--Sobic010G240900 Sobic010G223700 Sobic010G223700 Sobic004G117900--Sobic010G223700
Octagon: transcription factors


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